RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 CANXP27824 592 aaKnown RBP9.41□□□□□ -0.9
TRIM4-204ENST00000447480 RARSP54136 660 aaKnown RBP9.41□□□□□ -0.9
TRIM4-204ENST00000447480 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.41□□□□□ -0.9
TRIM4-204ENST00000447480 RAPGEF4Q8WZA2 1011 aa9.41□□□□□ -0.9
TRIM4-204ENST00000447480 PLSCR2Q9NRY7 297 aa9.41□□□□□ -0.9
TRIM4-204ENST00000447480 CCDC9Q9Y3X0 531 aaKnown RBP9.41□□□□□ -0.9
TRIM4-204ENST00000447480 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
TRIM4-204ENST00000447480 LRP6O75581 1613 aa9.41□□□□□ -0.9
TRIM4-204ENST00000447480 IL16Q14005 1332 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 CAMTA1Q9Y6Y1 1673 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 CALD1Q05682 793 aaKnown RBP9.4□□□□□ -0.9
TRIM4-204ENST00000447480 CNGB1Q14028 1251 aaPredicted RBP9.4□□□□□ -0.9
TRIM4-204ENST00000447480 PDIA6Q15084 440 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 AMOTQ4VCS5 1084 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 NLRP2Q9NX02 1062 aa9.4□□□□□ -0.9
TRIM4-204ENST00000447480 ARIH1Q9Y4X5 557 aaPredicted RBP9.4□□□□□ -0.9
TRIM4-204ENST00000447480 OFD1O75665 1012 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 BCAR3O75815 825 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 FCHSD2O94868 740 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 TATP17735 454 aaPredicted RBP9.39□□□□□ -0.91
TRIM4-204ENST00000447480 PBX2P40425 430 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 RBM6P78332 1123 aaKnown RBP9.39□□□□□ -0.91
TRIM4-204ENST00000447480 CHRNA2Q15822 529 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 HSP90AB2PQ58FF8 381 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 ZMYND15Q9H091 742 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 STRN4Q9NRL3 753 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 DDX19BQ9UMR2 479 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 PDZRN3Q9UPQ7 1066 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 PEAK1Q9H792 1746 aa9.39□□□□□ -0.91
TRIM4-204ENST00000447480 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 IGSF1Q8N6C5 1336 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 U2SURPO15042 1029 aaKnown RBP9.38□□□□□ -0.91
TRIM4-204ENST00000447480 IPO8O15397 1037 aaKnown RBP9.38□□□□□ -0.91
TRIM4-204ENST00000447480 HSP90AB1P08238 724 aaKnown RBP9.38□□□□□ -0.91
TRIM4-204ENST00000447480 IL2RBP14784 551 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 BRPF1P55201 1214 aaPredicted RBP9.38□□□□□ -0.91
TRIM4-204ENST00000447480 LMOD3Q0VAK6 560 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 EIF4A2Q14240 407 aaKnown RBP9.38□□□□□ -0.91
TRIM4-204ENST00000447480 MVPQ14764 893 aaKnown RBP9.38□□□□□ -0.91
TRIM4-204ENST00000447480 ZKSCAN2Q63HK3 967 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 ZSCAN30Q86W11 494 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 ATRNO75882 1429 aa9.38□□□□□ -0.91
TRIM4-204ENST00000447480 SPATA31A1Q5TZJ5 1347 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 SPATA31A5Q5VU36 1347 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 SPATA31A7Q8IWB4 1347 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 BCL9LQ86UU0 1499 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 ARHGAP33O14559 1287 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 U2AF1L5P0DN76 240 aaPredicted RBP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 RXRBP28702 533 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 IL13P35225 146 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 PSEN2P49810 448 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 U2AF1Q01081 240 aaKnown RBP eCLIP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 RAB3GAP1Q15042 981 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 PLEKHO1Q53GL0 409 aaPredicted RBP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 GAS2L2Q8NHY3 880 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 DDX12PQ92771 950 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 LTV1Q96GA3 475 aaPredicted RBP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 GJD4Q96KN9 370 aaPredicted RBP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 SLKQ9H2G2 1235 aaPredicted RBP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
TRIM4-204ENST00000447480 KDRP35968 1356 aa9.37□□□□□ -0.91
TRIM4-204ENST00000447480 RGPD1P0DJD0 1748 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 COL3A1P02461 1466 aaPredicted RBP9.36□□□□□ -0.91
TRIM4-204ENST00000447480 ZNF500O60304 480 aaPredicted RBP9.36□□□□□ -0.91
TRIM4-204ENST00000447480 NCLP19338 710 aaKnown RBP9.36□□□□□ -0.91
TRIM4-204ENST00000447480 LSM11P83369 360 aaKnown RBP eCLIP9.36□□□□□ -0.91
TRIM4-204ENST00000447480 SPNS2Q8IVW8 549 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 ZDHHC16Q969W1 377 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 KCNK17Q96T54 332 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 CWC22Q9HCG8 908 aaKnown RBP9.36□□□□□ -0.91
TRIM4-204ENST00000447480 COG6Q9Y2V7 657 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 NCAPD2Q15021 1401 aa9.36□□□□□ -0.91
TRIM4-204ENST00000447480 PCDH11XQ9BZA7 1347 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 PCDH11YQ9BZA8 1340 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 OVOS2A0A0G2JMS6 1433 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 A0A0G2JS52 829 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 EXOC5O00471 708 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 PHF14O94880 888 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 ZNF445P59923 1031 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 NUCB2P80303 420 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 C1orf141Q5JVX7 400 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 DZIP1LQ8IYY4 767 aaKnown RBP9.35□□□□□ -0.91
TRIM4-204ENST00000447480 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
TRIM4-204ENST00000447480 BCL2L12Q9HB09 334 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
TRIM4-204ENST00000447480 PTGER2P43116 358 aa9.34□□□□□ -0.91
TRIM4-204ENST00000447480 DDB1Q16531 1140 aa9.34□□□□□ -0.91
TRIM4-204ENST00000447480 ALDH1L2Q3SY69 923 aa9.34□□□□□ -0.91
TRIM4-204ENST00000447480 BMP2KLQ5H9B9 411 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms