RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 APAF1O14727 1248 aa27.16■■□□□ 1.94
VIL1-204ENST00000440053 NPHP1O15259 732 aa27.16■■□□□ 1.94
VIL1-204ENST00000440053 NECTIN2Q92692 538 aa27.16■■□□□ 1.94
VIL1-204ENST00000440053 BABAM1Q9NWV8 329 aa27.16■■□□□ 1.94
VIL1-204ENST00000440053 NIP7Q9Y221 180 aaKnown RBP eCLIP27.16■■□□□ 1.94
VIL1-204ENST00000440053 ZNF652Q9Y2D9 606 aa27.16■■□□□ 1.94
VIL1-204ENST00000440053 BCORQ6W2J9 1755 aa27.15■■□□□ 1.94
VIL1-204ENST00000440053 TTLL6Q8N841 843 aa27.15■■□□□ 1.94
VIL1-204ENST00000440053 ZNF622Q969S3 477 aaKnown RBP eCLIP27.15■■□□□ 1.94
VIL1-204ENST00000440053 SENP3-EIF4A1A0A087X0R7 540 aa27.14■■□□□ 1.94
VIL1-204ENST00000440053 ANXA1P04083 346 aa27.14■■□□□ 1.94
VIL1-204ENST00000440053 PDE6BP35913 854 aa27.14■■□□□ 1.94
VIL1-204ENST00000440053 NBPF5PQ86XG9 351 aaPredicted RBP27.14■■□□□ 1.94
VIL1-204ENST00000440053 LAMB4A4D0S4 1761 aa27.13■■□□□ 1.93
VIL1-204ENST00000440053 PDIA6Q15084 440 aa27.13■■□□□ 1.93
VIL1-204ENST00000440053 PROSER3Q2NL68 480 aa27.13■■□□□ 1.93
VIL1-204ENST00000440053 C9orf131Q5VYM1 1079 aa27.13■■□□□ 1.93
VIL1-204ENST00000440053 ZBTB3Q9H5J0 574 aa27.13■■□□□ 1.93
VIL1-204ENST00000440053 GPBP1L1Q9HC44 474 aaPredicted RBP27.13■■□□□ 1.93
VIL1-204ENST00000440053 ST5P78524 1137 aa27.12■■□□□ 1.93
VIL1-204ENST00000440053 ZNF219Q9P2Y4 722 aaPredicted RBP27.12■■□□□ 1.93
VIL1-204ENST00000440053 ANKRD31Q8N7Z5 1873 aa27.11■■□□□ 1.93
VIL1-204ENST00000440053 MAP3K15Q6ZN16 1313 aa27.11■■□□□ 1.93
VIL1-204ENST00000440053 C1QTNF8P60827 252 aa27.11■■□□□ 1.93
VIL1-204ENST00000440053 LRP10Q7Z4F1 713 aa27.11■■□□□ 1.93
VIL1-204ENST00000440053 ARFGEF1Q9Y6D6 1849 aa27.1■■□□□ 1.93
VIL1-204ENST00000440053 RASSF7Q02833 373 aa27.1■■□□□ 1.93
VIL1-204ENST00000440053 ERVV-1B6SEH8 477 aa27.09■■□□□ 1.93
VIL1-204ENST00000440053 TPTE2Q6XPS3 522 aa27.09■■□□□ 1.93
VIL1-204ENST00000440053 KIF6Q6ZMV9 814 aa27.09■■□□□ 1.93
VIL1-204ENST00000440053 RGL2O15211 777 aa27.08■■□□□ 1.93
VIL1-204ENST00000440053 SRGNP10124 158 aa27.07■■□□□ 1.92
VIL1-204ENST00000440053 GPTP24298 496 aa27.07■■□□□ 1.92
VIL1-204ENST00000440053 PRELPP51888 382 aa27.07■■□□□ 1.92
VIL1-204ENST00000440053 ERBB4Q15303 1308 aa27.07■■□□□ 1.92
VIL1-204ENST00000440053 C21orf2O43822 256 aa27.06■■□□□ 1.92
VIL1-204ENST00000440053 CFAP44Q96MT7 982 aa27.06■■□□□ 1.92
VIL1-204ENST00000440053 RNF181Q9P0P0 153 aa27.06■■□□□ 1.92
VIL1-204ENST00000440053 PDZRN3Q9UPQ7 1066 aa27.06■■□□□ 1.92
VIL1-204ENST00000440053 AIMP1Q12904 312 aaKnown RBP27.05■■□□□ 1.92
VIL1-204ENST00000440053 NUTM1Q86Y26 1132 aa27.05■■□□□ 1.92
VIL1-204ENST00000440053 MBIPQ9NS73 344 aa27.05■■□□□ 1.92
VIL1-204ENST00000440053 DLEC1Q9Y238 1755 aa27.04■■□□□ 1.92
VIL1-204ENST00000440053 ANP32CO43423 234 aa27.04■■□□□ 1.92
VIL1-204ENST00000440053 UBN2Q6ZU65 1347 aa27.03■■□□□ 1.92
VIL1-204ENST00000440053 COL11A2P13942 1736 aaPredicted RBP27.03■■□□□ 1.92
VIL1-204ENST00000440053 ZNF853P0CG23 659 aa27.03■■□□□ 1.92
VIL1-204ENST00000440053 GTF2E1P29083 439 aaPredicted RBP27.03■■□□□ 1.92
VIL1-204ENST00000440053 SUSD4Q5VX71 490 aa27.03■■□□□ 1.92
VIL1-204ENST00000440053 COPS6Q7L5N1 327 aa27.03■■□□□ 1.92
VIL1-204ENST00000440053 MASTLQ96GX5 879 aa27.03■■□□□ 1.92
VIL1-204ENST00000440053 STYK1Q6J9G0 422 aa27.02■■□□□ 1.92
VIL1-204ENST00000440053 GIGYF2Q6Y7W6 1299 aaKnown RBP27.02■■□□□ 1.92
VIL1-204ENST00000440053 ZNF34Q8IZ26 560 aa27.02■■□□□ 1.92
VIL1-204ENST00000440053 NFKBIEO00221 500 aa27.01■■□□□ 1.91
VIL1-204ENST00000440053 ERFEQ4G0M1 354 aa27.01■■□□□ 1.91
VIL1-204ENST00000440053 XAGE3Q8WTP9 111 aa27.01■■□□□ 1.91
VIL1-204ENST00000440053 MRS2Q9HD23 443 aa27.01■■□□□ 1.91
VIL1-204ENST00000440053 KLRG2A4D1S0 409 aaPredicted RBP27■■□□□ 1.91
VIL1-204ENST00000440053 PRPF40BQ6NWY9 871 aaKnown RBP27■■□□□ 1.91
VIL1-204ENST00000440053 CNKSR1Q969H4 720 aa27■■□□□ 1.91
VIL1-204ENST00000440053 CHPF2Q9P2E5 772 aa27■■□□□ 1.91
VIL1-204ENST00000440053 KIF3CO14782 793 aa27■■□□□ 1.91
VIL1-204ENST00000440053 DUSP27Q5VZP5 1158 aa27■■□□□ 1.91
VIL1-204ENST00000440053 DDX21Q9NR30 783 aaKnown RBP eCLIP27■■□□□ 1.91
VIL1-204ENST00000440053 NUP98P52948 1817 aa26.99■■□□□ 1.91
VIL1-204ENST00000440053 ELL2O00472 640 aaPredicted RBP26.99■■□□□ 1.91
VIL1-204ENST00000440053 HDGFL1Q5TGJ6 251 aa26.99■■□□□ 1.91
VIL1-204ENST00000440053 NMRK2Q9NPI5 230 aa26.99■■□□□ 1.91
VIL1-204ENST00000440053 ABCC12Q96J65 1359 aa26.98■■□□□ 1.91
VIL1-204ENST00000440053 NYXQ9GZU5 481 aa26.98■■□□□ 1.91
VIL1-204ENST00000440053 IFT57Q9NWB7 429 aa26.98■■□□□ 1.91
VIL1-204ENST00000440053 NPR1P16066 1061 aa26.97■■□□□ 1.91
VIL1-204ENST00000440053 LMNB1P20700 586 aa26.97■■□□□ 1.91
VIL1-204ENST00000440053 GNAI1P63096 354 aa26.96■■□□□ 1.91
VIL1-204ENST00000440053 OLFM4Q6UX06 510 aa26.96■■□□□ 1.91
VIL1-204ENST00000440053 ZNF428Q96B54 188 aa26.96■■□□□ 1.91
VIL1-204ENST00000440053 SLX4Q8IY92 1834 aa26.96■■□□□ 1.91
VIL1-204ENST00000440053 NTSR2O95665 410 aa26.95■■□□□ 1.91
VIL1-204ENST00000440053 C7orf43Q8WVR3 580 aa26.95■■□□□ 1.91
VIL1-204ENST00000440053 SBF1O95248 1867 aa26.95■■□□□ 1.9
VIL1-204ENST00000440053 C8orf58Q8NAV2 365 aa26.93■■□□□ 1.9
VIL1-204ENST00000440053 HOXB7P09629 217 aa26.93■■□□□ 1.9
VIL1-204ENST00000440053 CALD1Q05682 793 aaKnown RBP26.93■■□□□ 1.9
VIL1-204ENST00000440053 C3orf67Q6ZVT6 689 aa26.93■■□□□ 1.9
VIL1-204ENST00000440053 PPP1R42Q7Z4L9 355 aa26.92■■□□□ 1.9
VIL1-204ENST00000440053 DBF4Q9UBU7 674 aaPredicted RBP26.92■■□□□ 1.9
VIL1-204ENST00000440053 SYNE4Q8N205 404 aa26.91■■□□□ 1.9
VIL1-204ENST00000440053 RRAGCQ9HB90 399 aa26.91■■□□□ 1.9
VIL1-204ENST00000440053 SALL2Q9Y467 1007 aaPredicted RBP26.91■■□□□ 1.9
VIL1-204ENST00000440053 TCIRG1Q13488 830 aa26.9■■□□□ 1.9
VIL1-204ENST00000440053 PARP10Q53GL7 1025 aa26.9■■□□□ 1.9
VIL1-204ENST00000440053 WWC1Q8IX03 1113 aa26.9■■□□□ 1.9
VIL1-204ENST00000440053 UTP14AQ9BVJ6 771 aaKnown RBP26.9■■□□□ 1.9
VIL1-204ENST00000440053 TNRC6CQ9HCJ0 1690 aaKnown RBP26.9■■□□□ 1.9
VIL1-204ENST00000440053 CACNA1SQ13698 1873 aa26.89■■□□□ 1.9
VIL1-204ENST00000440053 CRY2Q49AN0 593 aa26.89■■□□□ 1.9
VIL1-204ENST00000440053 NLRP10Q86W26 655 aa26.89■■□□□ 1.9
VIL1-204ENST00000440053 TSR2Q969E8 191 aaKnown RBP26.89■■□□□ 1.9
VIL1-204ENST00000440053 ALDH1B1P30837 517 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms