RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 SETDB2Q96T68 719 aa24.19■■□□□ 1.46
GTF3A-204ENST00000438571 PDE6BP35913 854 aa24.18■■□□□ 1.46
GTF3A-204ENST00000438571 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
GTF3A-204ENST00000438571 C16orf71Q8IYS4 520 aaPredicted RBP24.18■■□□□ 1.46
GTF3A-204ENST00000438571 ZC3H4Q9UPT8 1303 aaKnown RBP24.17■■□□□ 1.46
GTF3A-204ENST00000438571 HTATSF1O43719 755 aaKnown RBP24.17■■□□□ 1.46
GTF3A-204ENST00000438571 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
GTF3A-204ENST00000438571 THUMPD2Q9BTF0 503 aaKnown RBP24.16■■□□□ 1.46
GTF3A-204ENST00000438571 NPHP1O15259 732 aa24.15■■□□□ 1.46
GTF3A-204ENST00000438571 TAF7Q15545 349 aaPredicted RBP24.15■■□□□ 1.46
GTF3A-204ENST00000438571 DNAJC5GQ8N7S2 189 aa24.15■■□□□ 1.46
GTF3A-204ENST00000438571 GLTPD2A6NH11 291 aa24.14■■□□□ 1.45
GTF3A-204ENST00000438571 SRGNP10124 158 aa24.14■■□□□ 1.45
GTF3A-204ENST00000438571 ST5P78524 1137 aa24.14■■□□□ 1.45
GTF3A-204ENST00000438571 HLFQ16534 295 aa24.13■■□□□ 1.45
GTF3A-204ENST00000438571 PDZRN3Q9UPQ7 1066 aa24.13■■□□□ 1.45
GTF3A-204ENST00000438571 PRPF40BQ6NWY9 871 aaKnown RBP24.12■■□□□ 1.45
GTF3A-204ENST00000438571 NBPF5PQ86XG9 351 aaPredicted RBP24.12■■□□□ 1.45
GTF3A-204ENST00000438571 FAM177BA6PVY3 158 aa24.11■■□□□ 1.45
GTF3A-204ENST00000438571 FSTL1Q12841 308 aa24.11■■□□□ 1.45
GTF3A-204ENST00000438571 STYK1Q6J9G0 422 aa24.11■■□□□ 1.45
GTF3A-204ENST00000438571 CLEC4GQ6UXB4 293 aa24.11■■□□□ 1.45
GTF3A-204ENST00000438571 POTECB2RU33 542 aa24.1■■□□□ 1.45
GTF3A-204ENST00000438571 MASTLQ96GX5 879 aa24.1■■□□□ 1.45
GTF3A-204ENST00000438571 NIP7Q9Y221 180 aaKnown RBP eCLIP24.1■■□□□ 1.45
GTF3A-204ENST00000438571 ZNF652Q9Y2D9 606 aa24.1■■□□□ 1.45
GTF3A-204ENST00000438571 ANKRD36CQ5JPF3 1778 aa24.09■■□□□ 1.45
GTF3A-204ENST00000438571 NFE2L2Q16236 605 aa24.09■■□□□ 1.45
GTF3A-204ENST00000438571 NGEFQ8N5V2 710 aa24.09■■□□□ 1.45
GTF3A-204ENST00000438571 CNKSR1Q969H4 720 aa24.09■■□□□ 1.45
GTF3A-204ENST00000438571 ABCC12Q96J65 1359 aa24.08■■□□□ 1.45
GTF3A-204ENST00000438571 TAOK3Q9H2K8 898 aa24.08■■□□□ 1.45
GTF3A-204ENST00000438571 LTBP3Q9NS15 1303 aa24.08■■□□□ 1.44
GTF3A-204ENST00000438571 EIF4A1P60842 406 aaKnown RBP24.07■■□□□ 1.44
GTF3A-204ENST00000438571 ERFEQ4G0M1 354 aa24.07■■□□□ 1.44
GTF3A-204ENST00000438571 OLFM4Q6UX06 510 aa24.07■■□□□ 1.44
GTF3A-204ENST00000438571 SMC1BQ8NDV3 1235 aa24.07■■□□□ 1.44
GTF3A-204ENST00000438571 LAMB2P55268 1798 aa24.06■■□□□ 1.44
GTF3A-204ENST00000438571 NEFMP07197 916 aa24.06■■□□□ 1.44
GTF3A-204ENST00000438571 VEGFAP15692 232 aaPredicted RBP24.06■■□□□ 1.44
GTF3A-204ENST00000438571 IFFO2Q5TF58 517 aa24.06■■□□□ 1.44
GTF3A-204ENST00000438571 SCN4AP35499 1836 aa24.05■■□□□ 1.44
GTF3A-204ENST00000438571 TTLL7Q6ZT98 887 aa24.05■■□□□ 1.44
GTF3A-204ENST00000438571 C7orf43Q8WVR3 580 aa24.05■■□□□ 1.44
GTF3A-204ENST00000438571 PNISRQ8TF01 805 aaKnown RBP24.04■■□□□ 1.44
GTF3A-204ENST00000438571 MAPK8IP3Q9UPT6 1336 aa24.04■■□□□ 1.44
GTF3A-204ENST00000438571 KLRG2A4D1S0 409 aaPredicted RBP24.03■■□□□ 1.44
GTF3A-204ENST00000438571 KLRG1Q96E93 195 aa24.03■■□□□ 1.44
GTF3A-204ENST00000438571 RRP7AQ9Y3A4 280 aaKnown RBP24.03■■□□□ 1.44
GTF3A-204ENST00000438571 RGL2O15211 777 aa24.02■■□□□ 1.44
GTF3A-204ENST00000438571 MYL6BP14649 208 aa24.02■■□□□ 1.44
GTF3A-204ENST00000438571 NPR1P16066 1061 aa24.02■■□□□ 1.44
GTF3A-204ENST00000438571 TPTE2Q6XPS3 522 aa24.02■■□□□ 1.44
GTF3A-204ENST00000438571 NUTM1Q86Y26 1132 aa24.02■■□□□ 1.44
GTF3A-204ENST00000438571 DDNO94850 711 aaPredicted RBP24.01■■□□□ 1.43
GTF3A-204ENST00000438571 MAP3K15Q6ZN16 1313 aa24.01■■□□□ 1.43
GTF3A-204ENST00000438571 UBN2Q6ZU65 1347 aa24.01■■□□□ 1.43
GTF3A-204ENST00000438571 SNED1Q8TER0 1413 aa24.01■■□□□ 1.43
GTF3A-204ENST00000438571 POTEIP0CG38 1075 aa24■■□□□ 1.43
GTF3A-204ENST00000438571 POTEJP0CG39 1038 aa24■■□□□ 1.43
GTF3A-204ENST00000438571 CCDC93Q567U6 631 aa24■■□□□ 1.43
GTF3A-204ENST00000438571 SLC51AQ86UW1 340 aa24■■□□□ 1.43
GTF3A-204ENST00000438571 ZBTB3Q9H5J0 574 aa24■■□□□ 1.43
GTF3A-204ENST00000438571 TAF1P21675 1872 aa24■■□□□ 1.43
GTF3A-204ENST00000438571 DPY19L2Q6NUT2 758 aa23.99■■□□□ 1.43
GTF3A-204ENST00000438571 PCNTO95613 3336 aa23.99■■□□□ 1.43
GTF3A-204ENST00000438571 COL4A5P29400 1685 aa23.99■■□□□ 1.43
GTF3A-204ENST00000438571 GPTP24298 496 aa23.98■■□□□ 1.43
GTF3A-204ENST00000438571 SOGA3Q5TF21 947 aa23.98■■□□□ 1.43
GTF3A-204ENST00000438571 ADAMTSL1Q8N6G6 1762 aa23.97■■□□□ 1.43
GTF3A-204ENST00000438571 ZNF277Q9NRM2 450 aaPredicted RBP23.97■■□□□ 1.43
GTF3A-204ENST00000438571 TSPYL4Q9UJ04 414 aa23.97■■□□□ 1.43
GTF3A-204ENST00000438571 ZNF541Q9H0D2 1346 aa23.96■■□□□ 1.43
GTF3A-204ENST00000438571 ERVV-1B6SEH8 477 aa23.96■■□□□ 1.43
GTF3A-204ENST00000438571 GTF2E1P29083 439 aaPredicted RBP23.96■■□□□ 1.43
GTF3A-204ENST00000438571 FKBP4Q02790 459 aaKnown RBP eCLIP23.96■■□□□ 1.43
GTF3A-204ENST00000438571 KIF6Q6ZMV9 814 aa23.96■■□□□ 1.43
GTF3A-204ENST00000438571 JMYQ8N9B5 988 aa23.96■■□□□ 1.43
GTF3A-204ENST00000438571 ANXA1P04083 346 aa23.95■■□□□ 1.42
GTF3A-204ENST00000438571 RIPK4P57078 832 aa23.95■■□□□ 1.42
GTF3A-204ENST00000438571 SUSD4Q5VX71 490 aa23.95■■□□□ 1.42
GTF3A-204ENST00000438571 LRP10Q7Z4F1 713 aa23.95■■□□□ 1.42
GTF3A-204ENST00000438571 RIC1Q4ADV7 1423 aa23.94■■□□□ 1.42
GTF3A-204ENST00000438571 LTBP1Q14766 1721 aa23.94■■□□□ 1.42
GTF3A-204ENST00000438571 PROSER3Q2NL68 480 aa23.94■■□□□ 1.42
GTF3A-204ENST00000438571 CRY2Q49AN0 593 aa23.94■■□□□ 1.42
GTF3A-204ENST00000438571 CCDC146Q8IYE0 955 aa23.94■■□□□ 1.42
GTF3A-204ENST00000438571 PNNQ9H307 717 aaKnown RBP23.94■■□□□ 1.42
GTF3A-204ENST00000438571 IBTKQ9P2D0 1353 aaPredicted RBP23.93■■□□□ 1.42
GTF3A-204ENST00000438571 TMPOP42166 694 aaKnown RBP23.93■■□□□ 1.42
GTF3A-204ENST00000438571 DDX10Q13206 875 aaKnown RBP23.93■■□□□ 1.42
GTF3A-204ENST00000438571 PDIA6Q15084 440 aa23.93■■□□□ 1.42
GTF3A-204ENST00000438571 RALBP1Q15311 655 aa23.93■■□□□ 1.42
GTF3A-204ENST00000438571 C3orf67Q6ZVT6 689 aa23.93■■□□□ 1.42
GTF3A-204ENST00000438571 NTSR2O95665 410 aa23.92■■□□□ 1.42
GTF3A-204ENST00000438571 EIF2S2P20042 333 aaKnown RBP23.92■■□□□ 1.42
GTF3A-204ENST00000438571 ZNF34Q8IZ26 560 aa23.92■■□□□ 1.42
GTF3A-204ENST00000438571 NYXQ9GZU5 481 aa23.92■■□□□ 1.42
GTF3A-204ENST00000438571 ERBB4Q15303 1308 aa23.91■■□□□ 1.42
GTF3A-204ENST00000438571 DDX60Q8IY21 1712 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms