RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TPCN2Q8NHX9 752 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 RHPN1Q8TCX5 695 aa7.66□□□□□ -1.18
HMGB1P31-201ENST00000437242 ALAS2P22557 587 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 ATP1A2P50993 1020 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 XP32Q5T750 250 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 TRIM11Q96F44 468 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 CHMP3Q9Y3E7 222 aa7.65□□□□□ -1.18
HMGB1P31-201ENST00000437242 USP17L3A6NCW0 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 USP17L4A6NCW7 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 UBTFP17480 764 aaKnown RBP7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 USP17L2Q6R6M4 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 USP17L1Q7RTZ2 530 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 PLVAPQ9BX97 442 aa7.64□□□□□ -1.19
HMGB1P31-201ENST00000437242 SPDYE3A6NKU9 549 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 SPATA31C1P0DKV0 1188 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 PSMA6P60900 246 aaKnown RBP7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 SH3PXD2AQ5TCZ1 1133 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 CCDC102BQ68D86 513 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 KIAA1024Q9UPX6 916 aa7.63□□□□□ -1.19
HMGB1P31-201ENST00000437242 SIN3BO75182 1162 aa7.62□□□□□ -1.19
HMGB1P31-201ENST00000437242 FLIIQ13045 1269 aa7.62□□□□□ -1.19
HMGB1P31-201ENST00000437242 TSPAN10Q9H1Z9 355 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P31-201ENST00000437242 ATP9BO43861 1147 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 CLDN10P78369 228 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 SFSWAPQ12872 951 aaKnown RBP7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 NEUROD1Q13562 356 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 PRRT3Q5FWE3 981 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 ADAMTS19Q8TE59 1207 aa7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 RBM19Q9Y4C8 960 aaKnown RBP7.61□□□□□ -1.19
HMGB1P31-201ENST00000437242 ADARB2-AS1A8MUL3 147 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 HIRAP54198 1017 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 SPEM2Q0P670 501 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 C1orf53Q5VUE5 145 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 OGFOD1Q8N543 542 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 HSH2DQ96JZ2 352 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 CEP63Q96MT8 703 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 UCN2Q96RP3 112 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 SLC30A3Q99726 388 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 MDFIQ99750 246 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 PHACTR1Q9C0D0 580 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 BRD7Q9NPI1 651 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
HMGB1P31-201ENST00000437242 PALM3A6NDB9 673 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 M0R082 166 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 M0R2N6 131 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 GATA4P43694 442 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 DOC2BQ14184 412 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 HDGFL1Q5TGJ6 251 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 ZNF417Q8TAU3 575 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 C7orf43Q8WVR3 580 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 TNFRSF25Q93038 417 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 ZNF587Q96SQ5 575 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 HCN4Q9Y3Q4 1203 aa7.59□□□□□ -1.19
HMGB1P31-201ENST00000437242 APBA3O96018 575 aa7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 PRKCSHP14314 528 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 ADH7P40394 386 aa7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 RAB44Q7Z6P3 723 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 ZNF594Q96JF6 807 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 MKRN1Q9UHC7 482 aaKnown RBP7.58□□□□□ -1.2
HMGB1P31-201ENST00000437242 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 ALBP02768 609 aa7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 SIX5Q8N196 739 aa7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 Q8N3U1 123 aa7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 TSEN2Q8NCE0 465 aaKnown RBP7.57□□□□□ -1.2
HMGB1P31-201ENST00000437242 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 TYRO3Q06418 890 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 POTEAQ6S8J7 498 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 SUSD3Q96L08 255 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 SEMA6BQ9H3T3 888 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 PRDM6Q9NQX0 595 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 KCNH4Q9UQ05 1017 aa7.56□□□□□ -1.2
HMGB1P31-201ENST00000437242 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 KCNQ4P56696 695 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 STARD13Q9Y3M8 1113 aa7.55□□□□□ -1.2
HMGB1P31-201ENST00000437242 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 TRIM28Q13263 835 aaKnown RBP7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 HIF1AQ16665 826 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 ZNF280CQ8ND82 737 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 BHMTQ93088 406 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 NACC1Q96RE7 527 aa7.54□□□□□ -1.2
HMGB1P31-201ENST00000437242 ALDH16A1Q8IZ83 802 aa7.53□□□□□ -1.2
HMGB1P31-201ENST00000437242 C21orf2O43822 256 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 RASA1P20936 1047 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 COL9A3Q14050 684 aaPredicted RBP7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 STAG2Q8N3U4 1231 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 SCG3Q8WXD2 468 aaKnown RBP7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 NGLY1Q96IV0 654 aa7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 UBE2OQ9C0C9 1292 aaKnown RBP7.52□□□□□ -1.21
HMGB1P31-201ENST00000437242 ATAD2Q6PL18 1390 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 LILRB5O75023 590 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 NID1P14543 1247 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 ITGB7P26010 798 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 SEC13P55735 322 aa7.51□□□□□ -1.21
HMGB1P31-201ENST00000437242 BTLAQ7Z6A9 289 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms