RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 DDX19BQ9UMR2 479 aa33.51■■■□□ 2.96
TMEM248-205ENST00000433271 RGPD3A6NKT7 1758 aaPredicted RBP33.48■■■□□ 2.95
TMEM248-205ENST00000433271 RGPD4Q7Z3J3 1758 aa33.48■■■□□ 2.95
TMEM248-205ENST00000433271 SF3B2Q13435 895 aaKnown RBP33.47■■■□□ 2.95
TMEM248-205ENST00000433271 KIF6Q6ZMV9 814 aa33.47■■■□□ 2.95
TMEM248-205ENST00000433271 C4BP0C0L5 1744 aa33.47■■■□□ 2.95
TMEM248-205ENST00000433271 RPS6KA4O75676 772 aa33.46■■■□□ 2.95
TMEM248-205ENST00000433271 BEND3Q5T5X7 828 aa33.46■■■□□ 2.95
TMEM248-205ENST00000433271 METTL22Q9BUU2 404 aaPredicted RBP33.46■■■□□ 2.95
TMEM248-205ENST00000433271 ATP10DQ9P241 1426 aa33.46■■■□□ 2.95
TMEM248-205ENST00000433271 AAMPQ13685 434 aa33.46■■■□□ 2.95
TMEM248-205ENST00000433271 GNPATO15228 680 aa33.45■■■□□ 2.95
TMEM248-205ENST00000433271 SRCIN1Q9C0H9 1055 aa33.45■■■□□ 2.95
TMEM248-205ENST00000433271 CHMP4BQ9H444 224 aaKnown RBP33.45■■■□□ 2.95
TMEM248-205ENST00000433271 DZIP3Q86Y13 1208 aaKnown RBP33.44■■■□□ 2.94
TMEM248-205ENST00000433271 CCDC125Q86Z20 511 aa33.44■■■□□ 2.94
TMEM248-205ENST00000433271 ARXQ96QS3 562 aa33.44■■■□□ 2.94
TMEM248-205ENST00000433271 MAP3K15Q6ZN16 1313 aa33.44■■■□□ 2.94
TMEM248-205ENST00000433271 ZBTB7BO15156 539 aaPredicted RBP33.43■■■□□ 2.94
TMEM248-205ENST00000433271 NEXNQ0ZGT2 675 aa33.43■■■□□ 2.94
TMEM248-205ENST00000433271 AK7Q96M32 723 aa33.43■■■□□ 2.94
TMEM248-205ENST00000433271 ZBTB3Q9H5J0 574 aa33.43■■■□□ 2.94
TMEM248-205ENST00000433271 RTCBQ9Y3I0 505 aaKnown RBP33.43■■■□□ 2.94
TMEM248-205ENST00000433271 A0A087WZG4 1122 aa33.42■■■□□ 2.94
TMEM248-205ENST00000433271 LINS1Q8NG48 757 aa33.42■■■□□ 2.94
TMEM248-205ENST00000433271 CAMKK2Q96RR4 588 aa33.42■■■□□ 2.94
TMEM248-205ENST00000433271 COL15A1P39059 1388 aa33.42■■■□□ 2.94
TMEM248-205ENST00000433271 N4BP2Q86UW6 1770 aaPredicted RBP33.42■■■□□ 2.94
TMEM248-205ENST00000433271 ERVV-1B6SEH8 477 aa33.42■■■□□ 2.94
TMEM248-205ENST00000433271 TBC1D2BQ9UPU7 963 aa33.42■■■□□ 2.94
TMEM248-205ENST00000433271 ARFGEF2Q9Y6D5 1785 aa33.41■■■□□ 2.94
TMEM248-205ENST00000433271 ALDH1L1O75891 902 aa33.41■■■□□ 2.94
TMEM248-205ENST00000433271 BAG6P46379 1132 aa33.4■■■□□ 2.94
TMEM248-205ENST00000433271 EN1Q05925 392 aaPredicted RBP33.4■■■□□ 2.94
TMEM248-205ENST00000433271 NUP188Q5SRE5 1749 aa33.4■■■□□ 2.94
TMEM248-205ENST00000433271 MYD88Q99836 296 aa33.39■■■□□ 2.94
TMEM248-205ENST00000433271 ZBTB40Q9NUA8 1239 aa33.39■■■□□ 2.94
TMEM248-205ENST00000433271 IGKV5-2P06315 115 aa33.38■■■□□ 2.93
TMEM248-205ENST00000433271 EZH2Q15910 746 aaKnown RBP33.37■■■□□ 2.93
TMEM248-205ENST00000433271 GIGYF2Q6Y7W6 1299 aaKnown RBP33.37■■■□□ 2.93
TMEM248-205ENST00000433271 PPP4R2Q9NY27 417 aa33.37■■■□□ 2.93
TMEM248-205ENST00000433271 IBTKQ9P2D0 1353 aaPredicted RBP33.37■■■□□ 2.93
TMEM248-205ENST00000433271 CAMTA2O94983 1202 aa33.35■■■□□ 2.93
TMEM248-205ENST00000433271 ADRA2BP18089 450 aa33.35■■■□□ 2.93
TMEM248-205ENST00000433271 TCIRG1Q13488 830 aa33.35■■■□□ 2.93
TMEM248-205ENST00000433271 CWF19L2Q2TBE0 894 aaKnown RBP33.35■■■□□ 2.93
TMEM248-205ENST00000433271 NEURL1BA8MQ27 555 aa33.35■■■□□ 2.93
TMEM248-205ENST00000433271 HLFQ16534 295 aa33.35■■■□□ 2.93
TMEM248-205ENST00000433271 AMIGO3Q86WK7 504 aa33.35■■■□□ 2.93
TMEM248-205ENST00000433271 HSP90AB3PQ58FF7 597 aa33.34■■■□□ 2.93
TMEM248-205ENST00000433271 TRAPPC3LQ5T215 181 aa33.34■■■□□ 2.93
TMEM248-205ENST00000433271 USP44Q9H0E7 712 aa33.34■■■□□ 2.93
TMEM248-205ENST00000433271 SMIM5Q71RC9 77 aa33.33■■■□□ 2.93
TMEM248-205ENST00000433271 ARHGEF1Q92888 912 aaKnown RBP33.33■■■□□ 2.93
TMEM248-205ENST00000433271 MEIS3Q99687 375 aa33.33■■■□□ 2.93
TMEM248-205ENST00000433271 ATP5J2-PTCD1G3V325 749 aa33.32■■■□□ 2.92
TMEM248-205ENST00000433271 RGL2O15211 777 aa33.32■■■□□ 2.92
TMEM248-205ENST00000433271 AKT1S1Q96B36 256 aa33.32■■■□□ 2.92
TMEM248-205ENST00000433271 GNAI3P08754 354 aa33.31■■■□□ 2.92
TMEM248-205ENST00000433271 SSFA2P28290 1259 aa33.31■■■□□ 2.92
TMEM248-205ENST00000433271 TRIM28Q13263 835 aaKnown RBP33.31■■■□□ 2.92
TMEM248-205ENST00000433271 DEFB132Q7Z7B7 95 aa33.31■■■□□ 2.92
TMEM248-205ENST00000433271 ISCA1Q9BUE6 129 aa33.31■■■□□ 2.92
TMEM248-205ENST00000433271 UBR3Q6ZT12 1888 aa33.31■■■□□ 2.92
TMEM248-205ENST00000433271 NARFQ9UHQ1 456 aa33.31■■■□□ 2.92
TMEM248-205ENST00000433271 GCKRQ14397 625 aa33.3■■■□□ 2.92
TMEM248-205ENST00000433271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.29■■■□□ 2.92
TMEM248-205ENST00000433271 PHF14O94880 888 aa33.29■■■□□ 2.92
TMEM248-205ENST00000433271 CLEC4GQ6UXB4 293 aa33.29■■■□□ 2.92
TMEM248-205ENST00000433271 CCDC191Q8NCU4 936 aa33.29■■■□□ 2.92
TMEM248-205ENST00000433271 ZNF827Q17R98 1081 aa33.28■■■□□ 2.92
TMEM248-205ENST00000433271 C9orf78Q9NZ63 289 aaPredicted RBP33.28■■■□□ 2.92
TMEM248-205ENST00000433271 ZNF652Q9Y2D9 606 aa33.28■■■□□ 2.92
TMEM248-205ENST00000433271 NUP98P52948 1817 aa33.28■■■□□ 2.92
TMEM248-205ENST00000433271 ZPR1O75312 459 aa33.28■■■□□ 2.92
TMEM248-205ENST00000433271 RFC4P35249 363 aa33.28■■■□□ 2.92
TMEM248-205ENST00000433271 GRM8O00222 908 aa33.27■■■□□ 2.92
TMEM248-205ENST00000433271 CWC25Q9NXE8 425 aaPredicted RBP33.27■■■□□ 2.92
TMEM248-205ENST00000433271 TFCP2L1Q9NZI6 479 aa33.27■■■□□ 2.92
TMEM248-205ENST00000433271 UBTFL1P0CB47 393 aaPredicted RBP33.26■■■□□ 2.91
TMEM248-205ENST00000433271 UTYO14607 1347 aa33.26■■■□□ 2.91
TMEM248-205ENST00000433271 BCORQ6W2J9 1755 aa33.25■■■□□ 2.91
TMEM248-205ENST00000433271 ZNF34Q8IZ26 560 aa33.25■■■□□ 2.91
TMEM248-205ENST00000433271 PCDHB15Q9Y5E8 787 aa33.25■■■□□ 2.91
TMEM248-205ENST00000433271 NBPF7P0C2Y1 421 aaPredicted RBP33.24■■■□□ 2.91
TMEM248-205ENST00000433271 AFDNP55196 1824 aaKnown RBP33.24■■■□□ 2.91
TMEM248-205ENST00000433271 GNAI2P04899 355 aa33.24■■■□□ 2.91
TMEM248-205ENST00000433271 USPL1Q5W0Q7 1092 aa33.24■■■□□ 2.91
TMEM248-205ENST00000433271 CCDC136Q96JN2 1154 aa33.24■■■□□ 2.91
TMEM248-205ENST00000433271 SRP68Q9UHB9 627 aaKnown RBP33.24■■■□□ 2.91
TMEM248-205ENST00000433271 USP42Q9H9J4 1324 aaKnown RBP33.24■■■□□ 2.91
TMEM248-205ENST00000433271 C1orf115Q9H7X2 142 aa33.23■■■□□ 2.91
TMEM248-205ENST00000433271 HDAC5Q9UQL6 1122 aa33.23■■■□□ 2.91
TMEM248-205ENST00000433271 GPTP24298 496 aa33.22■■■□□ 2.91
TMEM248-205ENST00000433271 FLAD1Q8NFF5 587 aa33.22■■■□□ 2.91
TMEM248-205ENST00000433271 SCN7AQ01118 1682 aa33.22■■■□□ 2.91
TMEM248-205ENST00000433271 ANKRD36CQ5JPF3 1778 aa33.22■■■□□ 2.91
TMEM248-205ENST00000433271 C4AP0C0L4 1744 aa33.21■■■□□ 2.91
TMEM248-205ENST00000433271 NLRP10Q86W26 655 aa33.21■■■□□ 2.91
TMEM248-205ENST00000433271 UPF1Q92900 1129 aaKnown RBP eCLIP33.21■■■□□ 2.912e-10■■■■■ 38.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms