RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 BICDL1Q6ZP65 573 aa13.81□□□□□ -0.2
ATG4B-211ENST00000429899 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
ATG4B-211ENST00000429899 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
ATG4B-211ENST00000429899 BCORQ6W2J9 1755 aa13.79□□□□□ -0.2
ATG4B-211ENST00000429899 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-211ENST00000429899 ZNF530Q6P9A1 599 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-211ENST00000429899 CARD14Q9BXL6 1004 aa13.79□□□□□ -0.2
ATG4B-211ENST00000429899 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
ATG4B-211ENST00000429899 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
ATG4B-211ENST00000429899 PDE6BP35913 854 aa13.78□□□□□ -0.2
ATG4B-211ENST00000429899 MTHFSP49914 203 aa13.78□□□□□ -0.2
ATG4B-211ENST00000429899 CST9Q5W186 159 aa13.78□□□□□ -0.2
ATG4B-211ENST00000429899 GCC1Q96CN9 775 aa13.78□□□□□ -0.2
ATG4B-211ENST00000429899 BRIP1Q9BX63 1249 aa13.78□□□□□ -0.2
ATG4B-211ENST00000429899 TLL2Q9Y6L7 1015 aa13.78□□□□□ -0.2
ATG4B-211ENST00000429899 TRAF5O00463 557 aa13.77□□□□□ -0.21
ATG4B-211ENST00000429899 CIAPIN1Q6FI81 312 aa13.77□□□□□ -0.21
ATG4B-211ENST00000429899 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
ATG4B-211ENST00000429899 POLKQ9UBT6 870 aa13.77□□□□□ -0.21
ATG4B-211ENST00000429899 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-211ENST00000429899 PLEKHO1Q53GL0 409 aaPredicted RBP13.76□□□□□ -0.21
ATG4B-211ENST00000429899 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
ATG4B-211ENST00000429899 TBC1D9BQ66K14 1250 aa13.76□□□□□ -0.21
ATG4B-211ENST00000429899 PRR5LQ6MZQ0 368 aa13.76□□□□□ -0.21
ATG4B-211ENST00000429899 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
ATG4B-211ENST00000429899 SOGA3Q5TF21 947 aa13.75□□□□□ -0.21
ATG4B-211ENST00000429899 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
ATG4B-211ENST00000429899 CNKSR1Q969H4 720 aa13.75□□□□□ -0.21
ATG4B-211ENST00000429899 ZNF277Q9NRM2 450 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-211ENST00000429899 PDZRN3Q9UPQ7 1066 aa13.75□□□□□ -0.21
ATG4B-211ENST00000429899 COL4A5P29400 1685 aa13.75□□□□□ -0.21
ATG4B-211ENST00000429899 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
ATG4B-211ENST00000429899 OLFM4Q6UX06 510 aa13.74□□□□□ -0.21
ATG4B-211ENST00000429899 C7orf43Q8WVR3 580 aa13.74□□□□□ -0.21
ATG4B-211ENST00000429899 SRGNP10124 158 aa13.73□□□□□ -0.21
ATG4B-211ENST00000429899 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
ATG4B-211ENST00000429899 SLC39A6Q13433 755 aa13.73□□□□□ -0.21
ATG4B-211ENST00000429899 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
ATG4B-211ENST00000429899 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
ATG4B-211ENST00000429899 CCDC93Q567U6 631 aa13.72□□□□□ -0.21
ATG4B-211ENST00000429899 SAPCD2Q86UD0 394 aa13.72□□□□□ -0.21
ATG4B-211ENST00000429899 AEBP1Q8IUX7 1158 aa13.72□□□□□ -0.21
ATG4B-211ENST00000429899 GPC2Q8N158 579 aa13.72□□□□□ -0.21
ATG4B-211ENST00000429899 GJA3Q9Y6H8 435 aa13.72□□□□□ -0.21
ATG4B-211ENST00000429899 FZD9O00144 591 aa13.71□□□□□ -0.21
ATG4B-211ENST00000429899 LMOD1P29536 600 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-211ENST00000429899 FKBP4Q02790 459 aaKnown RBP eCLIP13.71□□□□□ -0.21
ATG4B-211ENST00000429899 C1orf141Q5JVX7 400 aa13.71□□□□□ -0.21
ATG4B-211ENST00000429899 ZIC5Q96T25 663 aa13.71□□□□□ -0.21
ATG4B-211ENST00000429899 MRC1P22897 1456 aa13.71□□□□□ -0.21
ATG4B-211ENST00000429899 NPHP1O15259 732 aa13.7□□□□□ -0.22
ATG4B-211ENST00000429899 CELF2O95319 508 aaKnown RBP13.7□□□□□ -0.22
ATG4B-211ENST00000429899 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
ATG4B-211ENST00000429899 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
ATG4B-211ENST00000429899 SIPA1L3O60292 1781 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-211ENST00000429899 EPS15P42566 896 aa13.69□□□□□ -0.22
ATG4B-211ENST00000429899 TNNT2P45379 298 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-211ENST00000429899 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
ATG4B-211ENST00000429899 LGR6Q9HBX8 967 aa13.69□□□□□ -0.22
ATG4B-211ENST00000429899 MKI67P46013 3256 aaKnown RBP13.69□□□□□ -0.22
ATG4B-211ENST00000429899 IARSP41252 1262 aaKnown RBP13.68□□□□□ -0.22
ATG4B-211ENST00000429899 CNBD1Q8NA66 436 aa13.68□□□□□ -0.22
ATG4B-211ENST00000429899 ZNF408Q9H9D4 720 aa13.68□□□□□ -0.22
ATG4B-211ENST00000429899 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
ATG4B-211ENST00000429899 SNED1Q8TER0 1413 aa13.67□□□□□ -0.22
ATG4B-211ENST00000429899 DLL1O00548 723 aa13.67□□□□□ -0.22
ATG4B-211ENST00000429899 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
ATG4B-211ENST00000429899 SCNN1DP51172 638 aa13.67□□□□□ -0.22
ATG4B-211ENST00000429899 FXR1P51114 621 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATG4B-211ENST00000429899 ST5P78524 1137 aa13.66□□□□□ -0.22
ATG4B-211ENST00000429899 NOGQ13253 232 aa13.66□□□□□ -0.22
ATG4B-211ENST00000429899 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
ATG4B-211ENST00000429899 HHIPL1Q96JK4 782 aa13.66□□□□□ -0.22
ATG4B-211ENST00000429899 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
ATG4B-211ENST00000429899 EIF6P56537 245 aaKnown RBP13.65□□□□□ -0.22
ATG4B-211ENST00000429899 USP50Q70EL3 339 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-211ENST00000429899 CTU1Q7Z7A3 348 aaKnown RBP13.65□□□□□ -0.22
ATG4B-211ENST00000429899 SYNE4Q8N205 404 aa13.65□□□□□ -0.22
ATG4B-211ENST00000429899 JDP2Q8WYK2 163 aa13.65□□□□□ -0.22
ATG4B-211ENST00000429899 A0A087WZG4 1122 aa13.64□□□□□ -0.23
ATG4B-211ENST00000429899 TRPA1O75762 1119 aa13.64□□□□□ -0.23
ATG4B-211ENST00000429899 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
ATG4B-211ENST00000429899 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
ATG4B-211ENST00000429899 GLIS2Q9BZE0 524 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-211ENST00000429899 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-211ENST00000429899 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
ATG4B-211ENST00000429899 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
ATG4B-211ENST00000429899 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
ATG4B-211ENST00000429899 NPR1P16066 1061 aa13.62□□□□□ -0.23
ATG4B-211ENST00000429899 DDX10Q13206 875 aaKnown RBP13.62□□□□□ -0.23
ATG4B-211ENST00000429899 AKAP4Q5JQC9 854 aa13.62□□□□□ -0.23
ATG4B-211ENST00000429899 SULT6B1Q6IMI4 303 aa13.62□□□□□ -0.23
ATG4B-211ENST00000429899 SAGE1Q9NXZ1 904 aa13.62□□□□□ -0.23
ATG4B-211ENST00000429899 SZT2Q5T011 3432 aa13.61□□□□□ -0.23
ATG4B-211ENST00000429899 KLRG2A4D1S0 409 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-211ENST00000429899 HUNKP57058 714 aa13.61□□□□□ -0.23
ATG4B-211ENST00000429899 RNF186Q9NXI6 227 aa13.61□□□□□ -0.23
ATG4B-211ENST00000429899 NUP98P52948 1817 aa13.6□□□□□ -0.23
ATG4B-211ENST00000429899 STARD3NLO95772 234 aa13.6□□□□□ -0.23
ATG4B-211ENST00000429899 KIF23Q02241 960 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms