RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 ANKRD31Q8N7Z5 1873 aa16.71■□□□□ 0.27
GPC1-204ENST00000426280 FAM177BA6PVY3 158 aa16.7■□□□□ 0.26
GPC1-204ENST00000426280 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
GPC1-204ENST00000426280 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
GPC1-204ENST00000426280 ANP32CO43423 234 aa16.69■□□□□ 0.26
GPC1-204ENST00000426280 PRELPP51888 382 aa16.69■□□□□ 0.26
GPC1-204ENST00000426280 CLEC4GQ6UXB4 293 aa16.69■□□□□ 0.26
GPC1-204ENST00000426280 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
GPC1-204ENST00000426280 ZBTB3Q9H5J0 574 aa16.69■□□□□ 0.26
GPC1-204ENST00000426280 MBIPQ9NS73 344 aa16.69■□□□□ 0.26
GPC1-204ENST00000426280 BRIP1Q9BX63 1249 aa16.68■□□□□ 0.26
GPC1-204ENST00000426280 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
GPC1-204ENST00000426280 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
GPC1-204ENST00000426280 ADCY9O60503 1353 aa16.67■□□□□ 0.26
GPC1-204ENST00000426280 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
GPC1-204ENST00000426280 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
GPC1-204ENST00000426280 MAP3K15Q6ZN16 1313 aa16.67■□□□□ 0.26
GPC1-204ENST00000426280 H0YIN7 160 aa16.66■□□□□ 0.26
GPC1-204ENST00000426280 CNBD1Q8NA66 436 aa16.66■□□□□ 0.26
GPC1-204ENST00000426280 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
GPC1-204ENST00000426280 UBN2Q6ZU65 1347 aa16.66■□□□□ 0.26
GPC1-204ENST00000426280 ERVV-1B6SEH8 477 aa16.65■□□□□ 0.26
GPC1-204ENST00000426280 GPTP24298 496 aa16.65■□□□□ 0.26
GPC1-204ENST00000426280 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
GPC1-204ENST00000426280 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
GPC1-204ENST00000426280 NBPF5PQ86XG9 351 aaPredicted RBP16.65■□□□□ 0.26
GPC1-204ENST00000426280 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
GPC1-204ENST00000426280 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
GPC1-204ENST00000426280 ELL2O00472 640 aaPredicted RBP16.64■□□□□ 0.25
GPC1-204ENST00000426280 RASSF7Q02833 373 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 AIMP1Q12904 312 aaKnown RBP16.64■□□□□ 0.25
GPC1-204ENST00000426280 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 ZNF34Q8IZ26 560 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 TTLL6Q8N841 843 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 C8orf58Q8NAV2 365 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 XAGE3Q8WTP9 111 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.25
GPC1-204ENST00000426280 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
GPC1-204ENST00000426280 ARFGEF1Q9Y6D6 1849 aa16.63■□□□□ 0.25
GPC1-204ENST00000426280 SRGNP10124 158 aa16.63■□□□□ 0.25
GPC1-204ENST00000426280 PDE6BP35913 854 aa16.63■□□□□ 0.25
GPC1-204ENST00000426280 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
GPC1-204ENST00000426280 CHPF2Q9P2E5 772 aa16.63■□□□□ 0.25
GPC1-204ENST00000426280 ZNF652Q9Y2D9 606 aa16.63■□□□□ 0.25
GPC1-204ENST00000426280 DLEC1Q9Y238 1755 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 NUP98P52948 1817 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 KLRG2A4D1S0 409 aaPredicted RBP16.62■□□□□ 0.25
GPC1-204ENST00000426280 RGL2O15211 777 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 C9orf131Q5VYM1 1079 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
GPC1-204ENST00000426280 KIF6Q6ZMV9 814 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 TSPYL6Q8N831 410 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
GPC1-204ENST00000426280 ABCC12Q96J65 1359 aa16.62■□□□□ 0.25
GPC1-204ENST00000426280 C21orf2O43822 256 aa16.61■□□□□ 0.25
GPC1-204ENST00000426280 ST5P78524 1137 aa16.61■□□□□ 0.25
GPC1-204ENST00000426280 OLFM4Q6UX06 510 aa16.61■□□□□ 0.25
GPC1-204ENST00000426280 TPTE2Q6XPS3 522 aa16.61■□□□□ 0.25
GPC1-204ENST00000426280 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
GPC1-204ENST00000426280 SYNE4Q8N205 404 aa16.61■□□□□ 0.25
GPC1-204ENST00000426280 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
GPC1-204ENST00000426280 DDX21Q9NR30 783 aaKnown RBP eCLIP16.61■□□□□ 0.25
GPC1-204ENST00000426280 IFT57Q9NWB7 429 aa16.61■□□□□ 0.25
GPC1-204ENST00000426280 NFKBIEO00221 500 aa16.6■□□□□ 0.25
GPC1-204ENST00000426280 NPHP1O15259 732 aa16.6■□□□□ 0.25
GPC1-204ENST00000426280 GNAI1P63096 354 aa16.6■□□□□ 0.25
GPC1-204ENST00000426280 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
GPC1-204ENST00000426280 DIEXFQ68CQ4 756 aaKnown RBP16.6■□□□□ 0.25
GPC1-204ENST00000426280 NTSR2O95665 410 aa16.59■□□□□ 0.25
GPC1-204ENST00000426280 TNRC6CQ9HCJ0 1690 aaKnown RBP16.59■□□□□ 0.25
GPC1-204ENST00000426280 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
GPC1-204ENST00000426280 STYK1Q6J9G0 422 aa16.58■□□□□ 0.24
GPC1-204ENST00000426280 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
GPC1-204ENST00000426280 C7orf43Q8WVR3 580 aa16.58■□□□□ 0.24
GPC1-204ENST00000426280 MASTLQ96GX5 879 aa16.58■□□□□ 0.24
GPC1-204ENST00000426280 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
GPC1-204ENST00000426280 RNF181Q9P0P0 153 aa16.58■□□□□ 0.24
GPC1-204ENST00000426280 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
GPC1-204ENST00000426280 CCDC27Q2M243 656 aa16.57■□□□□ 0.24
GPC1-204ENST00000426280 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
GPC1-204ENST00000426280 GPBP1L1Q9HC44 474 aaPredicted RBP16.57■□□□□ 0.24
GPC1-204ENST00000426280 SPINK5Q9NQ38 1064 aaPredicted RBP16.57■□□□□ 0.24
GPC1-204ENST00000426280 KIF3CO14782 793 aa16.56■□□□□ 0.24
GPC1-204ENST00000426280 HOXB7P09629 217 aa16.56■□□□□ 0.24
GPC1-204ENST00000426280 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
GPC1-204ENST00000426280 TCIRG1Q13488 830 aa16.56■□□□□ 0.24
GPC1-204ENST00000426280 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
GPC1-204ENST00000426280 SBF1O95248 1867 aa16.56■□□□□ 0.24
GPC1-204ENST00000426280 NPR1P16066 1061 aa16.55■□□□□ 0.24
GPC1-204ENST00000426280 GTF2E1P29083 439 aaPredicted RBP16.55■□□□□ 0.24
GPC1-204ENST00000426280 NLRP10Q86W26 655 aa16.55■□□□□ 0.24
GPC1-204ENST00000426280 CNKSR1Q969H4 720 aa16.55■□□□□ 0.24
GPC1-204ENST00000426280 NMRK2Q9NPI5 230 aa16.55■□□□□ 0.24
GPC1-204ENST00000426280 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
GPC1-204ENST00000426280 ATP5J2-PTCD1G3V325 749 aa16.54■□□□□ 0.24
GPC1-204ENST00000426280 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms