RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SCN4AP35499 1836 aa16.94■□□□□ 0.3
SGCE-203ENST00000425444 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
SGCE-203ENST00000425444 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
SGCE-203ENST00000425444 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
SGCE-203ENST00000425444 BCL2L12Q9HB09 334 aa16.94■□□□□ 0.3
SGCE-203ENST00000425444 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
SGCE-203ENST00000425444 COL15A1P39059 1388 aa16.93■□□□□ 0.3
SGCE-203ENST00000425444 TEFQ10587 303 aa16.93■□□□□ 0.3
SGCE-203ENST00000425444 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
SGCE-203ENST00000425444 PDE6BP35913 854 aa16.92■□□□□ 0.3
SGCE-203ENST00000425444 SLC39A6Q13433 755 aa16.92■□□□□ 0.3
SGCE-203ENST00000425444 PDZRN3Q9UPQ7 1066 aa16.92■□□□□ 0.3
SGCE-203ENST00000425444 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
SGCE-203ENST00000425444 MAP1SQ66K74 1059 aaPredicted RBP16.91■□□□□ 0.3
SGCE-203ENST00000425444 PAXIP1Q6ZW49 1069 aaPredicted RBP16.91■□□□□ 0.3
SGCE-203ENST00000425444 TTC5Q8N0Z6 440 aa16.91■□□□□ 0.3
SGCE-203ENST00000425444 CNTROBQ8N137 903 aa16.91■□□□□ 0.3
SGCE-203ENST00000425444 CCDC24Q8N4L8 307 aa16.91■□□□□ 0.3
SGCE-203ENST00000425444 PHACTR3Q96KR7 559 aa16.91■□□□□ 0.3
SGCE-203ENST00000425444 BRIP1Q9BX63 1249 aa16.91■□□□□ 0.3
SGCE-203ENST00000425444 ZBTB1Q9Y2K1 713 aa16.91■□□□□ 0.3
SGCE-203ENST00000425444 NEFMP07197 916 aa16.9■□□□□ 0.3
SGCE-203ENST00000425444 HACL1Q9UJ83 578 aa16.9■□□□□ 0.3
SGCE-203ENST00000425444 ANKRD31Q8N7Z5 1873 aa16.89■□□□□ 0.29
SGCE-203ENST00000425444 EPHX2P34913 555 aa16.89■□□□□ 0.29
SGCE-203ENST00000425444 GRM1Q13255 1194 aa16.89■□□□□ 0.29
SGCE-203ENST00000425444 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
SGCE-203ENST00000425444 RTF1Q92541 710 aaKnown RBP16.89■□□□□ 0.29
SGCE-203ENST00000425444 RALBP1Q15311 655 aa16.88■□□□□ 0.29
SGCE-203ENST00000425444 SOGA3Q5TF21 947 aa16.88■□□□□ 0.29
SGCE-203ENST00000425444 CNKSR1Q969H4 720 aa16.88■□□□□ 0.29
SGCE-203ENST00000425444 CAPNS2Q96L46 248 aa16.88■□□□□ 0.29
SGCE-203ENST00000425444 TSKSQ9UJT2 592 aa16.88■□□□□ 0.29
SGCE-203ENST00000425444 SLX4Q8IY92 1834 aa16.87■□□□□ 0.29
SGCE-203ENST00000425444 ZEB1P37275 1124 aaPredicted RBP16.87■□□□□ 0.29
SGCE-203ENST00000425444 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
SGCE-203ENST00000425444 PNMA8AQ86V59 439 aaPredicted RBP16.87■□□□□ 0.29
SGCE-203ENST00000425444 GPR101Q96P66 508 aaPredicted RBP16.87■□□□□ 0.29
SGCE-203ENST00000425444 MCOLN1Q9GZU1 580 aa16.87■□□□□ 0.29
SGCE-203ENST00000425444 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
SGCE-203ENST00000425444 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
SGCE-203ENST00000425444 ECE1P42892 770 aa16.86■□□□□ 0.29
SGCE-203ENST00000425444 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
SGCE-203ENST00000425444 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
SGCE-203ENST00000425444 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
SGCE-203ENST00000425444 CACNA1SQ13698 1873 aa16.85■□□□□ 0.29
SGCE-203ENST00000425444 NPHP1O15259 732 aa16.85■□□□□ 0.29
SGCE-203ENST00000425444 CYP4F22Q6NT55 531 aa16.85■□□□□ 0.29
SGCE-203ENST00000425444 VSIG10Q8N0Z9 540 aa16.85■□□□□ 0.29
SGCE-203ENST00000425444 DDX21Q9NR30 783 aaKnown RBP eCLIP16.85■□□□□ 0.29
SGCE-203ENST00000425444 CASP8AP2Q9UKL3 1982 aa16.85■□□□□ 0.29
SGCE-203ENST00000425444 CEMIPQ8WUJ3 1361 aa16.85■□□□□ 0.29
SGCE-203ENST00000425444 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
SGCE-203ENST00000425444 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
SGCE-203ENST00000425444 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
SGCE-203ENST00000425444 ZNF790Q6PG37 636 aa16.84■□□□□ 0.29
SGCE-203ENST00000425444 MCM10Q7L590 875 aa16.84■□□□□ 0.29
SGCE-203ENST00000425444 RNF123Q5XPI4 1314 aa16.84■□□□□ 0.29
SGCE-203ENST00000425444 SIPA1L3O60292 1781 aaPredicted RBP16.84■□□□□ 0.29
SGCE-203ENST00000425444 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
SGCE-203ENST00000425444 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
SGCE-203ENST00000425444 PNNQ9H307 717 aaKnown RBP16.83■□□□□ 0.28
SGCE-203ENST00000425444 ZNF277Q9NRM2 450 aaPredicted RBP16.83■□□□□ 0.28
SGCE-203ENST00000425444 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
SGCE-203ENST00000425444 A0A087WZG4 1122 aa16.82■□□□□ 0.28
SGCE-203ENST00000425444 SRGNP10124 158 aa16.82■□□□□ 0.28
SGCE-203ENST00000425444 CCDC93Q567U6 631 aa16.82■□□□□ 0.28
SGCE-203ENST00000425444 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
SGCE-203ENST00000425444 MASTLQ96GX5 879 aa16.82■□□□□ 0.28
SGCE-203ENST00000425444 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
SGCE-203ENST00000425444 FMNL2Q96PY5 1086 aa16.82■□□□□ 0.28
SGCE-203ENST00000425444 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
SGCE-203ENST00000425444 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
SGCE-203ENST00000425444 STARD3NLO95772 234 aa16.81■□□□□ 0.28
SGCE-203ENST00000425444 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
SGCE-203ENST00000425444 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
SGCE-203ENST00000425444 AOC2O75106 756 aa16.8■□□□□ 0.28
SGCE-203ENST00000425444 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
SGCE-203ENST00000425444 ST5P78524 1137 aa16.8■□□□□ 0.28
SGCE-203ENST00000425444 FMR1Q06787 632 aaKnown RBP eCLIP16.8■□□□□ 0.28
SGCE-203ENST00000425444 DGKZQ13574 1117 aa16.8■□□□□ 0.28
SGCE-203ENST00000425444 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
SGCE-203ENST00000425444 MAP2K2P36507 400 aa16.79■□□□□ 0.28
SGCE-203ENST00000425444 FKBP4Q02790 459 aaKnown RBP eCLIP16.79■□□□□ 0.28
SGCE-203ENST00000425444 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
SGCE-203ENST00000425444 SETDB2Q96T68 719 aa16.79■□□□□ 0.28
SGCE-203ENST00000425444 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
SGCE-203ENST00000425444 TBC1D2BQ9UPU7 963 aa16.79■□□□□ 0.28
SGCE-203ENST00000425444 CA12O43570 354 aa16.78■□□□□ 0.28
SGCE-203ENST00000425444 NFE2L2Q16236 605 aa16.78■□□□□ 0.28
SGCE-203ENST00000425444 GPC2Q8N158 579 aa16.78■□□□□ 0.28
SGCE-203ENST00000425444 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
SGCE-203ENST00000425444 ARFGEF2Q9Y6D5 1785 aa16.78■□□□□ 0.28
SGCE-203ENST00000425444 KCNQ3O43525 872 aa16.77■□□□□ 0.28
SGCE-203ENST00000425444 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
SGCE-203ENST00000425444 FZD9O00144 591 aa16.76■□□□□ 0.27
SGCE-203ENST00000425444 CST9Q5W186 159 aa16.76■□□□□ 0.27
SGCE-203ENST00000425444 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
SGCE-203ENST00000425444 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
SGCE-203ENST00000425444 GJA3Q9Y6H8 435 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms