RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 ZNF652Q9Y2D9 606 aa23.52■■□□□ 1.36
GPC1-203ENST00000425056 ST5P78524 1137 aa23.51■■□□□ 1.35
GPC1-203ENST00000425056 NFE2L2Q16236 605 aa23.51■■□□□ 1.35
GPC1-203ENST00000425056 ZNF622Q969S3 477 aaKnown RBP eCLIP23.51■■□□□ 1.35
GPC1-203ENST00000425056 DICER1Q9UPY3 1922 aaKnown RBP23.51■■□□□ 1.35
GPC1-203ENST00000425056 NPHP1O15259 732 aa23.5■■□□□ 1.35
GPC1-203ENST00000425056 PNISRQ8TF01 805 aaKnown RBP23.5■■□□□ 1.35
GPC1-203ENST00000425056 SLX4Q8IY92 1834 aa23.49■■□□□ 1.35
GPC1-203ENST00000425056 APLP1P51693 650 aa23.49■■□□□ 1.35
GPC1-203ENST00000425056 MIS18AQ9NYP9 233 aa23.49■■□□□ 1.35
GPC1-203ENST00000425056 WDR90Q96KV7 1748 aa23.48■■□□□ 1.35
GPC1-203ENST00000425056 C16orf71Q8IYS4 520 aaPredicted RBP23.48■■□□□ 1.35
GPC1-203ENST00000425056 PNNQ9H307 717 aaKnown RBP23.48■■□□□ 1.35
GPC1-203ENST00000425056 SRGNP10124 158 aa23.47■■□□□ 1.35
GPC1-203ENST00000425056 STYK1Q6J9G0 422 aa23.47■■□□□ 1.35
GPC1-203ENST00000425056 NBPF5PQ86XG9 351 aaPredicted RBP23.47■■□□□ 1.35
GPC1-203ENST00000425056 MAPK8IP3Q9UPT6 1336 aa23.47■■□□□ 1.35
GPC1-203ENST00000425056 C21orf2O43822 256 aa23.46■■□□□ 1.35
GPC1-203ENST00000425056 CNKSR1Q969H4 720 aa23.46■■□□□ 1.35
GPC1-203ENST00000425056 RRAGCQ9HB90 399 aa23.46■■□□□ 1.35
GPC1-203ENST00000425056 LTBP3Q9NS15 1303 aa23.45■■□□□ 1.34
GPC1-203ENST00000425056 GLTPD2A6NH11 291 aa23.45■■□□□ 1.34
GPC1-203ENST00000425056 EIF4A1P60842 406 aaKnown RBP23.45■■□□□ 1.34
GPC1-203ENST00000425056 FSTL1Q12841 308 aa23.45■■□□□ 1.34
GPC1-203ENST00000425056 RALBP1Q15311 655 aa23.45■■□□□ 1.34
GPC1-203ENST00000425056 MASTLQ96GX5 879 aa23.45■■□□□ 1.34
GPC1-203ENST00000425056 THUMPD2Q9BTF0 503 aaKnown RBP23.45■■□□□ 1.34
GPC1-203ENST00000425056 NIP7Q9Y221 180 aaKnown RBP eCLIP23.45■■□□□ 1.34
GPC1-203ENST00000425056 PRPF40BQ6NWY9 871 aaKnown RBP23.44■■□□□ 1.34
GPC1-203ENST00000425056 NUP98P52948 1817 aa23.44■■□□□ 1.34
GPC1-203ENST00000425056 ZNF219Q9P2Y4 722 aaPredicted RBP23.43■■□□□ 1.34
GPC1-203ENST00000425056 KLRG2A4D1S0 409 aaPredicted RBP23.42■■□□□ 1.34
GPC1-203ENST00000425056 HLFQ16534 295 aa23.41■■□□□ 1.34
GPC1-203ENST00000425056 SOGA3Q5TF21 947 aa23.41■■□□□ 1.34
GPC1-203ENST00000425056 TPTE2Q6XPS3 522 aa23.41■■□□□ 1.34
GPC1-203ENST00000425056 TAOK3Q9H2K8 898 aa23.41■■□□□ 1.34
GPC1-203ENST00000425056 ERVV-1B6SEH8 477 aa23.39■■□□□ 1.33
GPC1-203ENST00000425056 VEGFAP15692 232 aaPredicted RBP23.39■■□□□ 1.33
GPC1-203ENST00000425056 NPR1P16066 1061 aa23.39■■□□□ 1.33
GPC1-203ENST00000425056 ERBB4Q15303 1308 aa23.38■■□□□ 1.33
GPC1-203ENST00000425056 MAP3K15Q6ZN16 1313 aa23.38■■□□□ 1.33
GPC1-203ENST00000425056 ERFEQ4G0M1 354 aa23.38■■□□□ 1.33
GPC1-203ENST00000425056 DNAJC5GQ8N7S2 189 aa23.38■■□□□ 1.33
GPC1-203ENST00000425056 SMC1BQ8NDV3 1235 aa23.38■■□□□ 1.33
GPC1-203ENST00000425056 C7orf43Q8WVR3 580 aa23.38■■□□□ 1.33
GPC1-203ENST00000425056 IBTKQ9P2D0 1353 aaPredicted RBP23.37■■□□□ 1.33
GPC1-203ENST00000425056 MYBBP1AQ9BQG0 1328 aaKnown RBP23.36■■□□□ 1.33
GPC1-203ENST00000425056 RIC1Q4ADV7 1423 aa23.36■■□□□ 1.33
GPC1-203ENST00000425056 DPY19L2Q6NUT2 758 aa23.36■■□□□ 1.33
GPC1-203ENST00000425056 KIF6Q6ZMV9 814 aa23.36■■□□□ 1.33
GPC1-203ENST00000425056 NGEFQ8N5V2 710 aa23.36■■□□□ 1.33
GPC1-203ENST00000425056 TSPYL4Q9UJ04 414 aa23.36■■□□□ 1.33
GPC1-203ENST00000425056 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
GPC1-203ENST00000425056 ABCC12Q96J65 1359 aa23.36■■□□□ 1.33
GPC1-203ENST00000425056 FAM177BA6PVY3 158 aa23.35■■□□□ 1.33
GPC1-203ENST00000425056 RIPK4P57078 832 aa23.35■■□□□ 1.33
GPC1-203ENST00000425056 CCDC93Q567U6 631 aa23.35■■□□□ 1.33
GPC1-203ENST00000425056 TTLL7Q6ZT98 887 aa23.35■■□□□ 1.33
GPC1-203ENST00000425056 POTECB2RU33 542 aa23.34■■□□□ 1.33
GPC1-203ENST00000425056 MYL6BP14649 208 aa23.34■■□□□ 1.33
GPC1-203ENST00000425056 TMPOP42166 694 aaKnown RBP23.34■■□□□ 1.33
GPC1-203ENST00000425056 LMOD3Q0VAK6 560 aa23.34■■□□□ 1.33
GPC1-203ENST00000425056 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
GPC1-203ENST00000425056 NYXQ9GZU5 481 aa23.34■■□□□ 1.33
GPC1-203ENST00000425056 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
GPC1-203ENST00000425056 UBN2Q6ZU65 1347 aa23.33■■□□□ 1.32
GPC1-203ENST00000425056 GTF2E1P29083 439 aaPredicted RBP23.32■■□□□ 1.32
GPC1-203ENST00000425056 CRY2Q49AN0 593 aa23.32■■□□□ 1.32
GPC1-203ENST00000425056 LRP10Q7Z4F1 713 aa23.31■■□□□ 1.32
GPC1-203ENST00000425056 ZBTB3Q9H5J0 574 aa23.31■■□□□ 1.32
GPC1-203ENST00000425056 SNED1Q8TER0 1413 aa23.31■■□□□ 1.32
GPC1-203ENST00000425056 HTRA3P83110 453 aa23.3■■□□□ 1.32
GPC1-203ENST00000425056 FKBP4Q02790 459 aaKnown RBP eCLIP23.3■■□□□ 1.32
GPC1-203ENST00000425056 NUTM1Q86Y26 1132 aa23.3■■□□□ 1.32
GPC1-203ENST00000425056 ALDH1B1P30837 517 aa23.29■■□□□ 1.32
GPC1-203ENST00000425056 GIGYF2Q6Y7W6 1299 aaKnown RBP23.29■■□□□ 1.32
GPC1-203ENST00000425056 ANKRD36CQ5JPF3 1778 aa23.29■■□□□ 1.32
GPC1-203ENST00000425056 GPTP24298 496 aa23.28■■□□□ 1.32
GPC1-203ENST00000425056 PDIA6Q15084 440 aa23.28■■□□□ 1.32
GPC1-203ENST00000425056 OLFM4Q6UX06 510 aa23.28■■□□□ 1.32
GPC1-203ENST00000425056 ZNF34Q8IZ26 560 aa23.28■■□□□ 1.32
GPC1-203ENST00000425056 RTKN2Q8IZC4 609 aa23.28■■□□□ 1.32
GPC1-203ENST00000425056 KLRG1Q96E93 195 aa23.28■■□□□ 1.32
GPC1-203ENST00000425056 SCN4AP35499 1836 aa23.27■■□□□ 1.32
GPC1-203ENST00000425056 DDNO94850 711 aaPredicted RBP23.27■■□□□ 1.32
GPC1-203ENST00000425056 NTSR2O95665 410 aa23.26■■□□□ 1.31
GPC1-203ENST00000425056 SUSD4Q5VX71 490 aa23.26■■□□□ 1.31
GPC1-203ENST00000425056 CCDC146Q8IYE0 955 aa23.26■■□□□ 1.31
GPC1-203ENST00000425056 EIF2S2P20042 333 aaKnown RBP23.25■■□□□ 1.31
GPC1-203ENST00000425056 PROSER3Q2NL68 480 aa23.25■■□□□ 1.31
GPC1-203ENST00000425056 RUNDC1Q96C34 613 aa23.25■■□□□ 1.31
GPC1-203ENST00000425056 L3MBTL3Q96JM7 780 aaPredicted RBP23.25■■□□□ 1.31
GPC1-203ENST00000425056 ZNF277Q9NRM2 450 aaPredicted RBP23.25■■□□□ 1.31
GPC1-203ENST00000425056 HOXA10P31260 410 aaPredicted RBP23.24■■□□□ 1.31
GPC1-203ENST00000425056 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
GPC1-203ENST00000425056 PARP10Q53GL7 1025 aa23.24■■□□□ 1.31
GPC1-203ENST00000425056 JMYQ8N9B5 988 aa23.24■■□□□ 1.31
GPC1-203ENST00000425056 IFFO2Q5TF58 517 aa23.23■■□□□ 1.31
GPC1-203ENST00000425056 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
GPC1-203ENST00000425056 RPGRQ92834 1020 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms