RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 SLX4Q8IY92 1834 aa23.01■■□□□ 1.27
MSH6-203ENST00000420813 NBPF26B4DH59 902 aa23■■□□□ 1.27
MSH6-203ENST00000420813 NPHP1O15259 732 aa23■■□□□ 1.27
MSH6-203ENST00000420813 APLP1P51693 650 aa23■■□□□ 1.27
MSH6-203ENST00000420813 NBPF10Q6P3W6 841 aaKnown RBP23■■□□□ 1.27
MSH6-203ENST00000420813 C16orf71Q8IYS4 520 aaPredicted RBP23■■□□□ 1.27
MSH6-203ENST00000420813 NBPF15Q8N660 670 aa23■■□□□ 1.27
MSH6-203ENST00000420813 NFKBIEO00221 500 aa22.99■■□□□ 1.27
MSH6-203ENST00000420813 PRELPP51888 382 aa22.99■■□□□ 1.27
MSH6-203ENST00000420813 NFE2L2Q16236 605 aa22.99■■□□□ 1.27
MSH6-203ENST00000420813 CCDC24Q8N4L8 307 aa22.99■■□□□ 1.27
MSH6-203ENST00000420813 NUP98P52948 1817 aa22.98■■□□□ 1.27
MSH6-203ENST00000420813 STYK1Q6J9G0 422 aa22.98■■□□□ 1.27
MSH6-203ENST00000420813 WDR90Q96KV7 1748 aa22.97■■□□□ 1.27
MSH6-203ENST00000420813 CNKSR1Q969H4 720 aa22.97■■□□□ 1.27
MSH6-203ENST00000420813 MIS18AQ9NYP9 233 aa22.97■■□□□ 1.27
MSH6-203ENST00000420813 MAPK8IP3Q9UPT6 1336 aa22.97■■□□□ 1.27
MSH6-203ENST00000420813 SRGNP10124 158 aa22.96■■□□□ 1.27
MSH6-203ENST00000420813 FSTL1Q12841 308 aa22.96■■□□□ 1.27
MSH6-203ENST00000420813 RALBP1Q15311 655 aa22.96■■□□□ 1.27
MSH6-203ENST00000420813 NBPF5PQ86XG9 351 aaPredicted RBP22.96■■□□□ 1.27
MSH6-203ENST00000420813 RRAGCQ9HB90 399 aa22.96■■□□□ 1.27
MSH6-203ENST00000420813 GLTPD2A6NH11 291 aa22.95■■□□□ 1.26
MSH6-203ENST00000420813 C21orf2O43822 256 aa22.95■■□□□ 1.26
MSH6-203ENST00000420813 MASTLQ96GX5 879 aa22.95■■□□□ 1.26
MSH6-203ENST00000420813 LTBP3Q9NS15 1303 aa22.95■■□□□ 1.26
MSH6-203ENST00000420813 NIP7Q9Y221 180 aaKnown RBP eCLIP22.94■■□□□ 1.26
MSH6-203ENST00000420813 EIF4A1P60842 406 aaKnown RBP22.93■■□□□ 1.26
MSH6-203ENST00000420813 SOGA3Q5TF21 947 aa22.93■■□□□ 1.26
MSH6-203ENST00000420813 TPTE2Q6XPS3 522 aa22.93■■□□□ 1.26
MSH6-203ENST00000420813 PRPF40BQ6NWY9 871 aaKnown RBP22.92■■□□□ 1.26
MSH6-203ENST00000420813 KLRG2A4D1S0 409 aaPredicted RBP22.91■■□□□ 1.26
MSH6-203ENST00000420813 THUMPD2Q9BTF0 503 aaKnown RBP22.91■■□□□ 1.26
MSH6-203ENST00000420813 TAOK3Q9H2K8 898 aa22.91■■□□□ 1.26
MSH6-203ENST00000420813 ZNF219Q9P2Y4 722 aaPredicted RBP22.91■■□□□ 1.26
MSH6-203ENST00000420813 VEGFAP15692 232 aaPredicted RBP22.9■■□□□ 1.26
MSH6-203ENST00000420813 ERVV-1B6SEH8 477 aa22.89■■□□□ 1.25
MSH6-203ENST00000420813 NPR1P16066 1061 aa22.89■■□□□ 1.25
MSH6-203ENST00000420813 HLFQ16534 295 aa22.89■■□□□ 1.25
MSH6-203ENST00000420813 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
MSH6-203ENST00000420813 ERFEQ4G0M1 354 aa22.88■■□□□ 1.25
MSH6-203ENST00000420813 DPY19L2Q6NUT2 758 aa22.88■■□□□ 1.25
MSH6-203ENST00000420813 SMC1BQ8NDV3 1235 aa22.88■■□□□ 1.25
MSH6-203ENST00000420813 MAP3K15Q6ZN16 1313 aa22.87■■□□□ 1.25
MSH6-203ENST00000420813 DNAJC5GQ8N7S2 189 aa22.87■■□□□ 1.25
MSH6-203ENST00000420813 C7orf43Q8WVR3 580 aa22.87■■□□□ 1.25
MSH6-203ENST00000420813 KIF6Q6ZMV9 814 aa22.86■■□□□ 1.25
MSH6-203ENST00000420813 NYXQ9GZU5 481 aa22.86■■□□□ 1.25
MSH6-203ENST00000420813 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
MSH6-203ENST00000420813 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
MSH6-203ENST00000420813 MYBBP1AQ9BQG0 1328 aaKnown RBP22.85■■□□□ 1.25
MSH6-203ENST00000420813 RIPK4P57078 832 aa22.85■■□□□ 1.25
MSH6-203ENST00000420813 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
MSH6-203ENST00000420813 CCDC93Q567U6 631 aa22.85■■□□□ 1.25
MSH6-203ENST00000420813 TSPYL4Q9UJ04 414 aa22.85■■□□□ 1.25
MSH6-203ENST00000420813 IBTKQ9P2D0 1353 aaPredicted RBP22.85■■□□□ 1.25
MSH6-203ENST00000420813 FAM177BA6PVY3 158 aa22.84■■□□□ 1.25
MSH6-203ENST00000420813 GTF2E1P29083 439 aaPredicted RBP22.84■■□□□ 1.25
MSH6-203ENST00000420813 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
MSH6-203ENST00000420813 RIC1Q4ADV7 1423 aa22.83■■□□□ 1.25
MSH6-203ENST00000420813 MYL6BP14649 208 aa22.83■■□□□ 1.25
MSH6-203ENST00000420813 TMPOP42166 694 aaKnown RBP22.83■■□□□ 1.25
MSH6-203ENST00000420813 DDX10Q13206 875 aaKnown RBP22.83■■□□□ 1.25
MSH6-203ENST00000420813 TTLL7Q6ZT98 887 aa22.83■■□□□ 1.25
MSH6-203ENST00000420813 POTECB2RU33 542 aa22.82■■□□□ 1.24
MSH6-203ENST00000420813 ALDH1B1P30837 517 aa22.82■■□□□ 1.24
MSH6-203ENST00000420813 SCN4AP35499 1836 aa22.82■■□□□ 1.24
MSH6-203ENST00000420813 ABCC12Q96J65 1359 aa22.81■■□□□ 1.24
MSH6-203ENST00000420813 CRY2Q49AN0 593 aa22.81■■□□□ 1.24
MSH6-203ENST00000420813 ANKRD36CQ5JPF3 1778 aa22.81■■□□□ 1.24
MSH6-203ENST00000420813 FKBP4Q02790 459 aaKnown RBP eCLIP22.8■■□□□ 1.24
MSH6-203ENST00000420813 ZBTB3Q9H5J0 574 aa22.8■■□□□ 1.24
MSH6-203ENST00000420813 GIGYF2Q6Y7W6 1299 aaKnown RBP22.79■■□□□ 1.24
MSH6-203ENST00000420813 RTKN2Q8IZC4 609 aa22.79■■□□□ 1.24
MSH6-203ENST00000420813 UBN2Q6ZU65 1347 aa22.79■■□□□ 1.24
MSH6-203ENST00000420813 LRP10Q7Z4F1 713 aa22.78■■□□□ 1.24
MSH6-203ENST00000420813 NUTM1Q86Y26 1132 aa22.78■■□□□ 1.24
MSH6-203ENST00000420813 ZNF34Q8IZ26 560 aa22.78■■□□□ 1.24
MSH6-203ENST00000420813 KLRG1Q96E93 195 aa22.78■■□□□ 1.24
MSH6-203ENST00000420813 GPTP24298 496 aa22.77■■□□□ 1.24
MSH6-203ENST00000420813 HTRA3P83110 453 aa22.77■■□□□ 1.24
MSH6-203ENST00000420813 SNED1Q8TER0 1413 aa22.76■■□□□ 1.23
MSH6-203ENST00000420813 DDNO94850 711 aaPredicted RBP22.76■■□□□ 1.23
MSH6-203ENST00000420813 PDIA6Q15084 440 aa22.76■■□□□ 1.23
MSH6-203ENST00000420813 EIF2S2P20042 333 aaKnown RBP22.75■■□□□ 1.23
MSH6-203ENST00000420813 HOXA10P31260 410 aaPredicted RBP22.75■■□□□ 1.23
MSH6-203ENST00000420813 WDR43Q15061 677 aaKnown RBP eCLIP22.75■■□□□ 1.23
MSH6-203ENST00000420813 PARP10Q53GL7 1025 aa22.75■■□□□ 1.23
MSH6-203ENST00000420813 SUSD4Q5VX71 490 aa22.75■■□□□ 1.23
MSH6-203ENST00000420813 RUNDC1Q96C34 613 aa22.75■■□□□ 1.23
MSH6-203ENST00000420813 NTSR2O95665 410 aa22.74■■□□□ 1.23
MSH6-203ENST00000420813 IFFO2Q5TF58 517 aa22.74■■□□□ 1.23
MSH6-203ENST00000420813 CC2D2BQ6DHV5 1058 aa22.74■■□□□ 1.23
MSH6-203ENST00000420813 OLFM4Q6UX06 510 aa22.74■■□□□ 1.23
MSH6-203ENST00000420813 PPP1R42Q7Z4L9 355 aa22.74■■□□□ 1.23
MSH6-203ENST00000420813 CCDC146Q8IYE0 955 aa22.74■■□□□ 1.23
MSH6-203ENST00000420813 JMYQ8N9B5 988 aa22.74■■□□□ 1.23
MSH6-203ENST00000420813 RPGRQ92834 1020 aaKnown RBP22.74■■□□□ 1.23
MSH6-203ENST00000420813 L3MBTL3Q96JM7 780 aaPredicted RBP22.74■■□□□ 1.23
MSH6-203ENST00000420813 ZNF277Q9NRM2 450 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms