RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CLEC4GQ6UXB4 293 aa14.59□□□□□ -0.07
SSBP3-206ENST00000420121 C2CD5Q86YS7 1000 aa14.59□□□□□ -0.07
SSBP3-206ENST00000420121 PRKRIP1Q9H875 184 aaPredicted RBP14.59□□□□□ -0.07
SSBP3-206ENST00000420121 KIF3CO14782 793 aa14.58□□□□□ -0.08
SSBP3-206ENST00000420121 RGL2O15211 777 aa14.58□□□□□ -0.08
SSBP3-206ENST00000420121 RIPK4P57078 832 aa14.58□□□□□ -0.08
SSBP3-206ENST00000420121 C9orf131Q5VYM1 1079 aa14.58□□□□□ -0.08
SSBP3-206ENST00000420121 SETDB2Q96T68 719 aa14.58□□□□□ -0.08
SSBP3-206ENST00000420121 BRIP1Q9BX63 1249 aa14.58□□□□□ -0.08
SSBP3-206ENST00000420121 TNRC6CQ9HCJ0 1690 aaKnown RBP14.58□□□□□ -0.08
SSBP3-206ENST00000420121 H0YIN7 160 aa14.57□□□□□ -0.08
SSBP3-206ENST00000420121 HLFQ16534 295 aa14.57□□□□□ -0.08
SSBP3-206ENST00000420121 TTLL6Q8N841 843 aa14.57□□□□□ -0.08
SSBP3-206ENST00000420121 CEP350Q5VT06 3117 aa14.57□□□□□ -0.08
SSBP3-206ENST00000420121 ZBTB22O15209 634 aa14.56□□□□□ -0.08
SSBP3-206ENST00000420121 RASSF7Q02833 373 aa14.56□□□□□ -0.08
SSBP3-206ENST00000420121 LRP10Q7Z4F1 713 aa14.56□□□□□ -0.08
SSBP3-206ENST00000420121 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
SSBP3-206ENST00000420121 CCDC146Q8IYE0 955 aa14.56□□□□□ -0.08
SSBP3-206ENST00000420121 CNBD1Q8NA66 436 aa14.56□□□□□ -0.08
SSBP3-206ENST00000420121 RRP7AQ9Y3A4 280 aaKnown RBP14.56□□□□□ -0.08
SSBP3-206ENST00000420121 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
SSBP3-206ENST00000420121 NFKBIEO00221 500 aa14.55□□□□□ -0.08
SSBP3-206ENST00000420121 PDE6BP35913 854 aa14.55□□□□□ -0.08
SSBP3-206ENST00000420121 ADAMTS8Q9UP79 889 aa14.55□□□□□ -0.08
SSBP3-206ENST00000420121 TRIM35Q9UPQ4 493 aa14.55□□□□□ -0.08
SSBP3-206ENST00000420121 ANKRD36CQ5JPF3 1778 aa14.55□□□□□ -0.08
SSBP3-206ENST00000420121 C1QBPQ07021 282 aaKnown RBP14.54□□□□□ -0.08
SSBP3-206ENST00000420121 TTLL7Q6ZT98 887 aa14.54□□□□□ -0.08
SSBP3-206ENST00000420121 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
SSBP3-206ENST00000420121 RNF181Q9P0P0 153 aa14.54□□□□□ -0.08
SSBP3-206ENST00000420121 TSPYL4Q9UJ04 414 aa14.54□□□□□ -0.08
SSBP3-206ENST00000420121 PDZRN3Q9UPQ7 1066 aa14.54□□□□□ -0.08
SSBP3-206ENST00000420121 ZNF652Q9Y2D9 606 aa14.54□□□□□ -0.08
SSBP3-206ENST00000420121 KLRG2A4D1S0 409 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-206ENST00000420121 SRGNP10124 158 aa14.53□□□□□ -0.08
SSBP3-206ENST00000420121 PDIA6Q15084 440 aa14.53□□□□□ -0.08
SSBP3-206ENST00000420121 NMRK2Q9NPI5 230 aa14.53□□□□□ -0.08
SSBP3-206ENST00000420121 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
SSBP3-206ENST00000420121 NIP7Q9Y221 180 aaKnown RBP eCLIP14.53□□□□□ -0.08
SSBP3-206ENST00000420121 ERBB4Q15303 1308 aa14.52□□□□□ -0.08
SSBP3-206ENST00000420121 MAP3K15Q6ZN16 1313 aa14.52□□□□□ -0.08
SSBP3-206ENST00000420121 ERVV-1B6SEH8 477 aa14.52□□□□□ -0.09
SSBP3-206ENST00000420121 ST5P78524 1137 aa14.52□□□□□ -0.09
SSBP3-206ENST00000420121 LMOD3Q0VAK6 560 aa14.52□□□□□ -0.09
SSBP3-206ENST00000420121 NBPF5PQ86XG9 351 aaPredicted RBP14.52□□□□□ -0.09
SSBP3-206ENST00000420121 NGEFQ8N5V2 710 aa14.52□□□□□ -0.09
SSBP3-206ENST00000420121 ZNF622Q969S3 477 aaKnown RBP eCLIP14.52□□□□□ -0.09
SSBP3-206ENST00000420121 ABCC12Q96J65 1359 aa14.51□□□□□ -0.09
SSBP3-206ENST00000420121 CHL1O00533 1208 aa14.51□□□□□ -0.09
SSBP3-206ENST00000420121 MYL6BP14649 208 aa14.51□□□□□ -0.09
SSBP3-206ENST00000420121 WDR43Q15061 677 aaKnown RBP eCLIP14.51□□□□□ -0.09
SSBP3-206ENST00000420121 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
SSBP3-206ENST00000420121 PROSER3Q2NL68 480 aa14.51□□□□□ -0.09
SSBP3-206ENST00000420121 STYK1Q6J9G0 422 aa14.51□□□□□ -0.09
SSBP3-206ENST00000420121 UBN2Q6ZU65 1347 aa14.5□□□□□ -0.09
SSBP3-206ENST00000420121 C21orf2O43822 256 aa14.5□□□□□ -0.09
SSBP3-206ENST00000420121 LMNB1P20700 586 aa14.5□□□□□ -0.09
SSBP3-206ENST00000420121 KRT24Q2M2I5 525 aa14.5□□□□□ -0.09
SSBP3-206ENST00000420121 C7orf43Q8WVR3 580 aa14.5□□□□□ -0.09
SSBP3-206ENST00000420121 MASTLQ96GX5 879 aa14.5□□□□□ -0.09
SSBP3-206ENST00000420121 LAMB2P55268 1798 aa14.5□□□□□ -0.09
SSBP3-206ENST00000420121 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
SSBP3-206ENST00000420121 ZC3H4Q9UPT8 1303 aaKnown RBP14.49□□□□□ -0.09
SSBP3-206ENST00000420121 PRPF40BQ6NWY9 871 aaKnown RBP14.49□□□□□ -0.09
SSBP3-206ENST00000420121 TPTE2Q6XPS3 522 aa14.49□□□□□ -0.09
SSBP3-206ENST00000420121 ZBTB3Q9H5J0 574 aa14.49□□□□□ -0.09
SSBP3-206ENST00000420121 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
SSBP3-206ENST00000420121 LTBP3Q9NS15 1303 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 FAM177BA6PVY3 158 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 NPHP1O15259 732 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 ANXA1P04083 346 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 ZNF34Q8IZ26 560 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 CNKSR1Q969H4 720 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
SSBP3-206ENST00000420121 WDR90Q96KV7 1748 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 SNED1Q8TER0 1413 aa14.48□□□□□ -0.09
SSBP3-206ENST00000420121 TOMM70O94826 608 aa14.47□□□□□ -0.09
SSBP3-206ENST00000420121 HSPA6P17066 643 aa14.47□□□□□ -0.09
SSBP3-206ENST00000420121 EIF2S2P20042 333 aaKnown RBP14.47□□□□□ -0.09
SSBP3-206ENST00000420121 GIGYF2Q6Y7W6 1299 aaKnown RBP14.47□□□□□ -0.09
SSBP3-206ENST00000420121 KIF6Q6ZMV9 814 aa14.47□□□□□ -0.09
SSBP3-206ENST00000420121 NUTM1Q86Y26 1132 aa14.47□□□□□ -0.09
SSBP3-206ENST00000420121 NPR1P16066 1061 aa14.46□□□□□ -0.09
SSBP3-206ENST00000420121 GPTP24298 496 aa14.46□□□□□ -0.09
SSBP3-206ENST00000420121 CRY2Q49AN0 593 aa14.46□□□□□ -0.09
SSBP3-206ENST00000420121 ERFEQ4G0M1 354 aa14.46□□□□□ -0.09
SSBP3-206ENST00000420121 SUSD4Q5VX71 490 aa14.46□□□□□ -0.09
SSBP3-206ENST00000420121 KDM2BQ8NHM5 1336 aa14.45□□□□□ -0.1
SSBP3-206ENST00000420121 NTSR2O95665 410 aa14.45□□□□□ -0.1
SSBP3-206ENST00000420121 ZNF853P0CG23 659 aa14.45□□□□□ -0.1
SSBP3-206ENST00000420121 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
SSBP3-206ENST00000420121 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
SSBP3-206ENST00000420121 RRAGCQ9HB90 399 aa14.45□□□□□ -0.1
SSBP3-206ENST00000420121 GLTPD2A6NH11 291 aa14.44□□□□□ -0.1
SSBP3-206ENST00000420121 APAF1O14727 1248 aa14.44□□□□□ -0.1
SSBP3-206ENST00000420121 ZEB1P37275 1124 aaPredicted RBP14.44□□□□□ -0.1
SSBP3-206ENST00000420121 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
SSBP3-206ENST00000420121 NYXQ9GZU5 481 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms