RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 GTF2E1P29083 439 aaPredicted RBP9.37□□□□□ -0.91
VRK2-203ENST00000417641 MAP3K11Q16584 847 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
VRK2-203ENST00000417641 FOXO3O43524 673 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 CDC25BP30305 580 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 NUP62CLQ9H1M0 184 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 SH2B1Q9NRF2 756 aaPredicted RBP9.36□□□□□ -0.91
VRK2-203ENST00000417641 TSPYL4Q9UJ04 414 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 CCDC61Q9Y6R9 512 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 NEO1Q92859 1461 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 FAM208AQ9UK61 1670 aaKnown RBP9.36□□□□□ -0.91
VRK2-203ENST00000417641 RAPGEF3O95398 923 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 MAP4K4O95819 1239 aaPredicted RBP9.36□□□□□ -0.91
VRK2-203ENST00000417641 ME3Q16798 604 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 MTHFSDQ2M296 383 aaKnown RBP9.36□□□□□ -0.91
VRK2-203ENST00000417641 ADCK5Q3MIX3 580 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 FBXO31Q5XUX0 539 aaPredicted RBP9.36□□□□□ -0.91
VRK2-203ENST00000417641 RHPN1Q8TCX5 695 aa9.36□□□□□ -0.91
VRK2-203ENST00000417641 CACTINQ8WUQ7 758 aaKnown RBP9.36□□□□□ -0.91
VRK2-203ENST00000417641 MAP3K5Q99683 1374 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 ADGRL3Q9HAR2 1447 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 RBM6P78332 1123 aaKnown RBP9.35□□□□□ -0.91
VRK2-203ENST00000417641 TERF2Q15554 542 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 CCDC144BQ3MJ40 725 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 SIRT1Q96EB6 747 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 C16orf45Q96MC5 204 aaPredicted RBP9.35□□□□□ -0.91
VRK2-203ENST00000417641 PDRG1Q9NUG6 133 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 A2ML1A8K2U0 1454 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 PRR36Q9H6K5 1346 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 USP31Q70CQ4 1352 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 LRRC37A3O60309 1634 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 DTNBO60941 627 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 CASTP20810 708 aaKnown RBP9.35□□□□□ -0.91
VRK2-203ENST00000417641 PTH1RQ03431 593 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 NECTIN1Q15223 517 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 ANO6Q4KMQ2 910 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 HSP90AB2PQ58FF8 381 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 CLSTN2Q9H4D0 955 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 ERBB3P21860 1342 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 MAP3K19Q56UN5 1328 aa9.35□□□□□ -0.91
VRK2-203ENST00000417641 PDIA4P13667 645 aaKnown RBP9.34□□□□□ -0.91
VRK2-203ENST00000417641 NYAP1Q6ZVC0 841 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 ZNF771Q7L3S4 317 aaPredicted RBP9.34□□□□□ -0.91
VRK2-203ENST00000417641 CNTROBQ8N137 903 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 CCDC112Q8NEF3 446 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 KCND1Q9NSA2 647 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 KDRP35968 1356 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 NRXN3Q9Y4C0 1643 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 KRT85P78386 507 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 CAMK4Q16566 473 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 SARM1Q6SZW1 724 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 CDC37L1Q7L3B6 337 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 PPP1R42Q7Z4L9 355 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 ZNF397Q8NF99 534 aaPredicted RBP9.34□□□□□ -0.91
VRK2-203ENST00000417641 STK31Q9BXU1 1019 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 DDX19AQ9NUU7 478 aaKnown RBP9.34□□□□□ -0.91
VRK2-203ENST00000417641 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 SPG7Q9UQ90 795 aa9.34□□□□□ -0.91
VRK2-203ENST00000417641 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
VRK2-203ENST00000417641 TECPR2O15040 1411 aa9.33□□□□□ -0.92
VRK2-203ENST00000417641 NALCNQ8IZF0 1738 aa9.33□□□□□ -0.92
VRK2-203ENST00000417641 IQCB1Q15051 598 aa9.33□□□□□ -0.92
VRK2-203ENST00000417641 KIF1BPQ96EK5 621 aa9.33□□□□□ -0.92
VRK2-203ENST00000417641 JAKMIP1Q96N16 626 aaKnown RBP9.33□□□□□ -0.92
VRK2-203ENST00000417641 DACT1Q9NYF0 836 aa9.33□□□□□ -0.92
VRK2-203ENST00000417641 VPS37CA5D8V6 355 aaPredicted RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 SURF6O75683 361 aaKnown RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 UBTFL1P0CB47 393 aaPredicted RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 SLFNL1Q499Z3 407 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 FAM173BQ6P4H8 233 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 CWC27Q6UX04 472 aaKnown RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 LRRC8AQ8IWT6 810 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 CKAP2LQ8IYA6 745 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 NECAB1Q8N987 351 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 BBXQ8WY36 941 aaPredicted RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 PGBD1Q96JS3 809 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 TRIM5Q9C035 493 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 ALDH8A1Q9H2A2 487 aaPredicted RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 SNRKQ9NRH2 765 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 CYP46A1Q9Y6A2 500 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 TTC41PQ6P2S7 1318 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 METP08581 1390 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 USP27XA6NNY8 438 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 FAM193AP78312 1265 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 COL9A3Q14050 684 aaPredicted RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 LARP1BQ659C4 914 aaKnown RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 KRT222Q8N1A0 295 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 TNMDQ9H2S6 317 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 NPHP3Q7Z494 1330 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 RICTORQ6R327 1708 aa9.32□□□□□ -0.92
VRK2-203ENST00000417641 CHD2O14647 1828 aaKnown RBP9.32□□□□□ -0.92
VRK2-203ENST00000417641 GIGYF1O75420 1035 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms