RNA–Protein interactions for RNA: ENST00000417640.6

NECAB1-201, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB1, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-201ENST00000417640 FBXO31Q5XUX0 539 aaPredicted RBP21.71■■□□□ 1.07
NECAB1-201ENST00000417640 ZKSCAN5Q9Y2L8 839 aa21.71■■□□□ 1.07
NECAB1-201ENST00000417640 CRACR2AQ9BSW2 395 aa21.71■■□□□ 1.07
NECAB1-201ENST00000417640 NAPBQ9H115 298 aa21.71■■□□□ 1.07
NECAB1-201ENST00000417640 ZBTB40Q9NUA8 1239 aa21.71■■□□□ 1.07
NECAB1-201ENST00000417640 MAP3K2Q9Y2U5 619 aa21.71■■□□□ 1.07
NECAB1-201ENST00000417640 USP48Q86UV5 1035 aa21.71■■□□□ 1.07
NECAB1-201ENST00000417640 CNNM3Q8NE01 707 aa21.7■■□□□ 1.06
NECAB1-201ENST00000417640 IGHMBP2P38935 993 aaKnown RBP21.7■■□□□ 1.06
NECAB1-201ENST00000417640 TMC6Q7Z403 805 aa21.7■■□□□ 1.06
NECAB1-201ENST00000417640 C8orf58Q8NAV2 365 aa21.7■■□□□ 1.06
NECAB1-201ENST00000417640 ZSCAN16Q9H4T2 348 aaPredicted RBP21.7■■□□□ 1.06
NECAB1-201ENST00000417640 STARD3NLO95772 234 aa21.7■■□□□ 1.06
NECAB1-201ENST00000417640 ZNF397Q8NF99 534 aaPredicted RBP21.7■■□□□ 1.06
NECAB1-201ENST00000417640 PAXBP1Q9Y5B6 917 aa21.7■■□□□ 1.06
NECAB1-201ENST00000417640 ATP2B2Q01814 1243 aa21.69■■□□□ 1.06
NECAB1-201ENST00000417640 NOLC1Q14978 699 aaKnown RBP eCLIP21.69■■□□□ 1.06
NECAB1-201ENST00000417640 A0A087WZG4 1122 aa21.69■■□□□ 1.06
NECAB1-201ENST00000417640 CENPHQ9H3R5 247 aa21.69■■□□□ 1.06
NECAB1-201ENST00000417640 CNPY2Q9Y2B0 182 aa21.69■■□□□ 1.06
NECAB1-201ENST00000417640 DCTPP1Q9H773 170 aa21.69■■□□□ 1.06
NECAB1-201ENST00000417640 SSBP05455 408 aaKnown RBP eCLIP21.68■■□□□ 1.06
NECAB1-201ENST00000417640 HS1BP3Q53T59 392 aa21.68■■□□□ 1.06
NECAB1-201ENST00000417640 PHAXQ9H814 394 aaKnown RBP21.68■■□□□ 1.06
NECAB1-201ENST00000417640 ABCF2Q9UG63 623 aa21.68■■□□□ 1.06
NECAB1-201ENST00000417640 FBLN1P23142 703 aa21.68■■□□□ 1.06
NECAB1-201ENST00000417640 PRIM1P49642 420 aaKnown RBP21.68■■□□□ 1.06
NECAB1-201ENST00000417640 JAKMIP3Q5VZ66 844 aa21.68■■□□□ 1.06
NECAB1-201ENST00000417640 C16orf71Q8IYS4 520 aaPredicted RBP21.68■■□□□ 1.06
NECAB1-201ENST00000417640 PIBF1Q8WXW3 757 aa21.68■■□□□ 1.06
NECAB1-201ENST00000417640 BIN1O00499 593 aa21.67■■□□□ 1.06
NECAB1-201ENST00000417640 SLC12A7Q9Y666 1083 aa21.67■■□□□ 1.06
NECAB1-201ENST00000417640 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
NECAB1-201ENST00000417640 SNW1Q13573 536 aaKnown RBP21.67■■□□□ 1.06
NECAB1-201ENST00000417640 FAM200AQ8TCP9 573 aa21.67■■□□□ 1.06
NECAB1-201ENST00000417640 USP8P40818 1118 aa21.67■■□□□ 1.06
NECAB1-201ENST00000417640 IFIT5Q13325 482 aaKnown RBP21.67■■□□□ 1.06
NECAB1-201ENST00000417640 MAP9Q49MG5 647 aa21.67■■□□□ 1.06
NECAB1-201ENST00000417640 CEP135Q66GS9 1140 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 USP16Q9Y5T5 823 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 ARHGEF12Q9NZN5 1544 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 KDM5BQ9UGL1 1544 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 SPA17Q15506 151 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 NECAB1Q8N987 351 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 TAF4BQ92750 862 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 ZNF830Q96NB3 372 aaPredicted RBP21.66■■□□□ 1.06
NECAB1-201ENST00000417640 FANCAO15360 1455 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 ATP8B2P98198 1209 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 PHF8Q9UPP1 1060 aa21.66■■□□□ 1.06
NECAB1-201ENST00000417640 RNF123Q5XPI4 1314 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 GOLGA8AA7E2F4 631 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 GOLIM4O00461 696 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 VAMP4O75379 141 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 MAP3K12Q12852 859 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 RAPGEF6Q8TEU7 1601 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 DUOX2Q9NRD8 1548 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 CCDC150Q8NCX0 1101 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 ORC3Q9UBD5 711 aaPredicted RBP21.65■■□□□ 1.06
NECAB1-201ENST00000417640 AMOTL2Q9Y2J4 779 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 GOLGA6L9A6NEM1 432 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 MINDY4BA8MYZ0 360 aa21.65■■□□□ 1.06
NECAB1-201ENST00000417640 SSRP1Q08945 709 aaKnown RBP21.65■■□□□ 1.06
NECAB1-201ENST00000417640 PUS7Q96PZ0 661 aaKnown RBP21.65■■□□□ 1.06
NECAB1-201ENST00000417640 CALCOCO1Q9P1Z2 691 aa21.64■■□□□ 1.06
NECAB1-201ENST00000417640 MCM3P25205 808 aa21.64■■□□□ 1.06
NECAB1-201ENST00000417640 PAF1Q8N7H5 531 aa21.64■■□□□ 1.06
NECAB1-201ENST00000417640 CCDC171Q6TFL3 1326 aa21.64■■□□□ 1.06
NECAB1-201ENST00000417640 KDM2BQ8NHM5 1336 aa21.64■■□□□ 1.06
NECAB1-201ENST00000417640 NUP153P49790 1475 aaKnown RBP21.64■■□□□ 1.05
NECAB1-201ENST00000417640 F13A1P00488 732 aa21.64■■□□□ 1.05
NECAB1-201ENST00000417640 EIF2AK4Q9P2K8 1649 aaKnown RBP21.63■■□□□ 1.05
NECAB1-201ENST00000417640 IFIT3O14879 490 aaKnown RBP21.63■■□□□ 1.05
NECAB1-201ENST00000417640 CARD14Q9BXL6 1004 aa21.63■■□□□ 1.05
NECAB1-201ENST00000417640 CCDC82Q8N4S0 544 aa21.63■■□□□ 1.05
NECAB1-201ENST00000417640 ITSN2Q9NZM3 1697 aa21.63■■□□□ 1.05
NECAB1-201ENST00000417640 ACEP12821 1306 aa21.63■■□□□ 1.05
NECAB1-201ENST00000417640 GOLGA6L7A0A1B0GV03 622 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 POLR3GO15318 223 aaPredicted RBP21.62■■□□□ 1.05
NECAB1-201ENST00000417640 FKBP15Q5T1M5 1219 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 CTCFLQ8NI51 663 aaPredicted RBP21.62■■□□□ 1.05
NECAB1-201ENST00000417640 BRF1Q92994 677 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 ANO6Q4KMQ2 910 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 PLEKHM2Q8IWE5 1019 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 RNF41Q9H4P4 317 aaPredicted RBP21.62■■□□□ 1.05
NECAB1-201ENST00000417640 RBM8AQ9Y5S9 174 aaKnown RBP21.62■■□□□ 1.05
NECAB1-201ENST00000417640 POLR3DP05423 398 aaPredicted RBP21.62■■□□□ 1.05
NECAB1-201ENST00000417640 CCDC186Q7Z3E2 898 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 IARSP41252 1262 aaKnown RBP21.62■■□□□ 1.05
NECAB1-201ENST00000417640 CEP85Q6P2H3 762 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 CPLX3Q8WVH0 158 aa21.62■■□□□ 1.05
NECAB1-201ENST00000417640 BMS1Q14692 1282 aaKnown RBP21.61■■□□□ 1.05
NECAB1-201ENST00000417640 UBE2Q2Q8WVN8 375 aa21.61■■□□□ 1.05
NECAB1-201ENST00000417640 CFAP43Q8NDM7 1665 aa21.61■■□□□ 1.05
NECAB1-201ENST00000417640 SPDYE4A6NLX3 237 aa21.61■■□□□ 1.05
NECAB1-201ENST00000417640 ATP10BO94823 1461 aa21.61■■□□□ 1.05
NECAB1-201ENST00000417640 INTS4Q96HW7 963 aaKnown RBP21.61■■□□□ 1.05
NECAB1-201ENST00000417640 POTEB2H3BUK9 544 aa21.6■■□□□ 1.05
NECAB1-201ENST00000417640 CCDC102BQ68D86 513 aa21.6■■□□□ 1.05
NECAB1-201ENST00000417640 NUP88Q99567 741 aaPredicted RBP21.6■■□□□ 1.05
NECAB1-201ENST00000417640 POLKQ9UBT6 870 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms