RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 VRTNQ9H8Y1 702 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 DONSONQ9NYP3 566 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 CALCOCO1Q9P1Z2 691 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 MRVI1Q9Y6F6 885 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 PIK3C2AO00443 1686 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 GNPATO15228 680 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 NRDCO43847 1150 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 MTA1Q13330 715 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 PHLDB3Q6NSJ2 640 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 KLHL42Q9P2K6 505 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 APAF1O14727 1248 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 RFC5P40937 340 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.79□□□□□ -0.68
SP140-204ENST00000417495 SUGT1Q9Y2Z0 365 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 ABCC6O95255 1503 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 CBX1P83916 185 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 GABPB1Q06547 395 aaPredicted RBP10.78□□□□□ -0.68
SP140-204ENST00000417495 ANKRD23Q86SG2 305 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 ZNF513Q8N8E2 541 aaPredicted RBP10.78□□□□□ -0.68
SP140-204ENST00000417495 ITFG2Q969R8 447 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 PRR36Q9H6K5 1346 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 DIAPH1O60610 1272 aaKnown RBP10.78□□□□□ -0.68
SP140-204ENST00000417495 CALRP27797 417 aaKnown RBP10.78□□□□□ -0.68
SP140-204ENST00000417495 SETDB1Q15047 1291 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 HDGFL1Q5TGJ6 251 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 WAPLQ7Z5K2 1190 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 CDCA7LQ96GN5 454 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
SP140-204ENST00000417495 R3HCC1Q9Y3T6 440 aaKnown RBP10.78□□□□□ -0.68
SP140-204ENST00000417495 TTC21BQ7Z4L5 1316 aa10.78□□□□□ -0.68
SP140-204ENST00000417495 GTF2A1P52655 376 aaPredicted RBP10.77□□□□□ -0.69
SP140-204ENST00000417495 PEAK1Q9H792 1746 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 RTL1A6NKG5 1358 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 ADGRL3Q9HAR2 1447 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 ZNF853P0CG23 659 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 CSPP1Q1MSJ5 1256 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 EXOC8Q8IYI6 725 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 TCP11L2Q8N4U5 519 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 MNS1Q8NEH6 495 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 BCL2L13Q9BXK5 485 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 LRRC37A3O60309 1634 aa10.77□□□□□ -0.69
SP140-204ENST00000417495 RECKO95980 971 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 POLKQ9UBT6 870 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 CAMTA1Q9Y6Y1 1673 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 PDIA6Q15084 440 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 NAALADL2Q58DX5 795 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 BORCS6Q96GS4 357 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 CDCA7Q9BWT1 371 aaPredicted RBP10.76□□□□□ -0.69
SP140-204ENST00000417495 ARHGEF10O15013 1369 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 DCCP43146 1447 aa10.76□□□□□ -0.69
SP140-204ENST00000417495 SASS6Q6UVJ0 657 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 DPH6Q7L8W6 267 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 MKL1Q969V6 931 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 BEGAINQ9BUH8 593 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 RBM27Q9P2N5 1060 aaKnown RBP10.75□□□□□ -0.69
SP140-204ENST00000417495 DLG5Q8TDM6 1919 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 FAM210AQ96ND0 272 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 RGPD8O14715 1765 aaPredicted RBP10.75□□□□□ -0.69
SP140-204ENST00000417495 MSNP26038 577 aaKnown RBP10.75□□□□□ -0.69
SP140-204ENST00000417495 IL13P35225 146 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 TNNT3P45378 269 aaPredicted RBP10.75□□□□□ -0.69
SP140-204ENST00000417495 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 UCN2Q96RP3 112 aa10.75□□□□□ -0.69
SP140-204ENST00000417495 NPHP4O75161 1426 aaPredicted RBP10.75□□□□□ -0.69
SP140-204ENST00000417495 VIRMAQ69YN4 1812 aaKnown RBP10.74□□□□□ -0.69
SP140-204ENST00000417495 KDM2BQ8NHM5 1336 aa10.74□□□□□ -0.69
SP140-204ENST00000417495 HDAC1Q13547 482 aaPredicted RBP10.74□□□□□ -0.69
SP140-204ENST00000417495 COG3Q96JB2 828 aa10.74□□□□□ -0.69
SP140-204ENST00000417495 TMPOP42166 694 aaKnown RBP10.74□□□□□ -0.69
SP140-204ENST00000417495 MDM2Q00987 491 aaPredicted RBP10.74□□□□□ -0.69
SP140-204ENST00000417495 ANKLE2Q86XL3 938 aa10.74□□□□□ -0.69
SP140-204ENST00000417495 GRPEL1Q9HAV7 217 aa10.74□□□□□ -0.69
SP140-204ENST00000417495 MED4Q9NPJ6 270 aa10.74□□□□□ -0.69
SP140-204ENST00000417495 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.74□□□□□ -0.69
SP140-204ENST00000417495 TRPM3Q9HCF6 1732 aaPredicted RBP10.74□□□□□ -0.69
SP140-204ENST00000417495 SLIT3O75094 1523 aa10.73□□□□□ -0.69
SP140-204ENST00000417495 NOP2P46087 812 aaKnown RBP10.73□□□□□ -0.69
SP140-204ENST00000417495 TSPAN18Q96SJ8 248 aa10.73□□□□□ -0.69
SP140-204ENST00000417495 TDO2P48775 406 aa10.73□□□□□ -0.69
SP140-204ENST00000417495 HS1BP3Q53T59 392 aa10.73□□□□□ -0.69
SP140-204ENST00000417495 EVI5LQ96CN4 794 aa10.73□□□□□ -0.69
SP140-204ENST00000417495 NBPF3Q9H094 633 aa10.73□□□□□ -0.69
SP140-204ENST00000417495 GGNBP2Q9H3C7 697 aa10.73□□□□□ -0.69
SP140-204ENST00000417495 SBNO1A3KN83 1393 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 KDRP35968 1356 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 RAD50Q92878 1312 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 GPR37L1O60883 481 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 ALDH1L2Q3SY69 923 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 CENPQQ7L2Z9 268 aaPredicted RBP10.72□□□□□ -0.69
SP140-204ENST00000417495 ARMCX6Q7L4S7 300 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 SLC26A8Q96RN1 970 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 FEZ2Q9UHY8 353 aaPredicted RBP10.72□□□□□ -0.69
SP140-204ENST00000417495 NCAPD2Q15021 1401 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 PEX14O75381 377 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 FAM161AQ3B820 660 aa10.72□□□□□ -0.69
SP140-204ENST00000417495 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
SP140-204ENST00000417495 ICE2Q659A1 982 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms