RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 VEGFAP15692 232 aaPredicted RBP19.72■□□□□ 0.75
RPS28-201ENST00000417088 ST5P78524 1137 aa19.72■□□□□ 0.75
RPS28-201ENST00000417088 TAF7Q15545 349 aaPredicted RBP19.72■□□□□ 0.75
RPS28-201ENST00000417088 STYK1Q6J9G0 422 aa19.72■□□□□ 0.75
RPS28-201ENST00000417088 BCORQ6W2J9 1755 aa19.72■□□□□ 0.75
RPS28-201ENST00000417088 SMC1BQ8NDV3 1235 aa19.71■□□□□ 0.75
RPS28-201ENST00000417088 CNKSR1Q969H4 720 aa19.71■□□□□ 0.75
RPS28-201ENST00000417088 CCDC88AQ3V6T2 1871 aa19.71■□□□□ 0.75
RPS28-201ENST00000417088 WDR90Q96KV7 1748 aa19.71■□□□□ 0.75
RPS28-201ENST00000417088 MIS18AQ9NYP9 233 aa19.7■□□□□ 0.74
RPS28-201ENST00000417088 ZNF652Q9Y2D9 606 aa19.7■□□□□ 0.74
RPS28-201ENST00000417088 PRPF40BQ6NWY9 871 aaKnown RBP19.69■□□□□ 0.74
RPS28-201ENST00000417088 NBPF5PQ86XG9 351 aaPredicted RBP19.69■□□□□ 0.74
RPS28-201ENST00000417088 MASTLQ96GX5 879 aa19.69■□□□□ 0.74
RPS28-201ENST00000417088 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
RPS28-201ENST00000417088 TIAM2Q8IVF5 1701 aa19.68■□□□□ 0.74
RPS28-201ENST00000417088 POTECB2RU33 542 aa19.68■□□□□ 0.74
RPS28-201ENST00000417088 RGL2O15211 777 aa19.68■□□□□ 0.74
RPS28-201ENST00000417088 ERFEQ4G0M1 354 aa19.68■□□□□ 0.74
RPS28-201ENST00000417088 DPY19L2Q6NUT2 758 aa19.68■□□□□ 0.74
RPS28-201ENST00000417088 FER1L6Q2WGJ9 1857 aa19.68■□□□□ 0.74
RPS28-201ENST00000417088 SLX4Q8IY92 1834 aa19.67■□□□□ 0.74
RPS28-201ENST00000417088 KLRG1Q96E93 195 aa19.67■□□□□ 0.74
RPS28-201ENST00000417088 PLEKHF1Q96S99 279 aa19.67■□□□□ 0.74
RPS28-201ENST00000417088 TAOK3Q9H2K8 898 aa19.67■□□□□ 0.74
RPS28-201ENST00000417088 NIP7Q9Y221 180 aaKnown RBP eCLIP19.67■□□□□ 0.74
RPS28-201ENST00000417088 NEFMP07197 916 aa19.66■□□□□ 0.74
RPS28-201ENST00000417088 HLFQ16534 295 aa19.66■□□□□ 0.74
RPS28-201ENST00000417088 TPTE2Q6XPS3 522 aa19.66■□□□□ 0.74
RPS28-201ENST00000417088 C7orf43Q8WVR3 580 aa19.66■□□□□ 0.74
RPS28-201ENST00000417088 KLRG2A4D1S0 409 aaPredicted RBP19.65■□□□□ 0.74
RPS28-201ENST00000417088 SOGA3Q5TF21 947 aa19.65■□□□□ 0.74
RPS28-201ENST00000417088 PNISRQ8TF01 805 aaKnown RBP19.65■□□□□ 0.74
RPS28-201ENST00000417088 NPR1P16066 1061 aa19.64■□□□□ 0.73
RPS28-201ENST00000417088 JMYQ8N9B5 988 aa19.64■□□□□ 0.73
RPS28-201ENST00000417088 DICER1Q9UPY3 1922 aaKnown RBP19.64■□□□□ 0.73
RPS28-201ENST00000417088 FAM177BA6PVY3 158 aa19.63■□□□□ 0.73
RPS28-201ENST00000417088 NFE2L2Q16236 605 aa19.63■□□□□ 0.73
RPS28-201ENST00000417088 EIF4A1P60842 406 aaKnown RBP19.62■□□□□ 0.73
RPS28-201ENST00000417088 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
RPS28-201ENST00000417088 DLG5Q8TDM6 1919 aa19.62■□□□□ 0.73
RPS28-201ENST00000417088 ARFGEF2Q9Y6D5 1785 aa19.62■□□□□ 0.73
RPS28-201ENST00000417088 CACNA1SQ13698 1873 aa19.61■□□□□ 0.73
RPS28-201ENST00000417088 DDNO94850 711 aaPredicted RBP19.61■□□□□ 0.73
RPS28-201ENST00000417088 CCDC93Q567U6 631 aa19.61■□□□□ 0.73
RPS28-201ENST00000417088 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
RPS28-201ENST00000417088 KDM3BQ7LBC6 1761 aa19.6■□□□□ 0.73
RPS28-201ENST00000417088 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
RPS28-201ENST00000417088 ERVV-1B6SEH8 477 aa19.59■□□□□ 0.73
RPS28-201ENST00000417088 TTLL7Q6ZT98 887 aa19.59■□□□□ 0.73
RPS28-201ENST00000417088 PNNQ9H307 717 aaKnown RBP19.59■□□□□ 0.73
RPS28-201ENST00000417088 RRP7AQ9Y3A4 280 aaKnown RBP19.59■□□□□ 0.73
RPS28-201ENST00000417088 MAP3K15Q6ZN16 1313 aa19.58■□□□□ 0.73
RPS28-201ENST00000417088 GTF2E1P29083 439 aaPredicted RBP19.58■□□□□ 0.72
RPS28-201ENST00000417088 FKBP4Q02790 459 aaKnown RBP eCLIP19.58■□□□□ 0.72
RPS28-201ENST00000417088 OLFM4Q6UX06 510 aa19.58■□□□□ 0.72
RPS28-201ENST00000417088 MAPK8IP3Q9UPT6 1336 aa19.57■□□□□ 0.72
RPS28-201ENST00000417088 MYL6BP14649 208 aa19.57■□□□□ 0.72
RPS28-201ENST00000417088 ALDH1B1P30837 517 aa19.56■□□□□ 0.72
RPS28-201ENST00000417088 NUTM1Q86Y26 1132 aa19.56■□□□□ 0.72
RPS28-201ENST00000417088 NYXQ9GZU5 481 aa19.56■□□□□ 0.72
RPS28-201ENST00000417088 ZNF277Q9NRM2 450 aaPredicted RBP19.56■□□□□ 0.72
RPS28-201ENST00000417088 ABCC12Q96J65 1359 aa19.56■□□□□ 0.72
RPS28-201ENST00000417088 POTEIP0CG38 1075 aa19.55■□□□□ 0.72
RPS28-201ENST00000417088 POTEJP0CG39 1038 aa19.55■□□□□ 0.72
RPS28-201ENST00000417088 CRY2Q49AN0 593 aa19.55■□□□□ 0.72
RPS28-201ENST00000417088 CHADLQ6NUI6 762 aa19.55■□□□□ 0.72
RPS28-201ENST00000417088 KIF6Q6ZMV9 814 aa19.55■□□□□ 0.72
RPS28-201ENST00000417088 RTKN2Q8IZC4 609 aa19.55■□□□□ 0.72
RPS28-201ENST00000417088 GPTP24298 496 aa19.54■□□□□ 0.72
RPS28-201ENST00000417088 L3MBTL3Q96JM7 780 aaPredicted RBP19.54■□□□□ 0.72
RPS28-201ENST00000417088 ZBTB3Q9H5J0 574 aa19.54■□□□□ 0.72
RPS28-201ENST00000417088 PCNTO95613 3336 aa19.54■□□□□ 0.72
RPS28-201ENST00000417088 UBN2Q6ZU65 1347 aa19.53■□□□□ 0.72
RPS28-201ENST00000417088 SUSD4Q5VX71 490 aa19.53■□□□□ 0.72
RPS28-201ENST00000417088 TSPYL4Q9UJ04 414 aa19.53■□□□□ 0.72
RPS28-201ENST00000417088 NUP98P52948 1817 aa19.53■□□□□ 0.72
RPS28-201ENST00000417088 ERBB4Q15303 1308 aa19.52■□□□□ 0.72
RPS28-201ENST00000417088 ZNF541Q9H0D2 1346 aa19.52■□□□□ 0.72
RPS28-201ENST00000417088 IQCA1LA6NCM1 817 aa19.52■□□□□ 0.72
RPS28-201ENST00000417088 RIPK4P57078 832 aa19.52■□□□□ 0.72
RPS28-201ENST00000417088 RALBP1Q15311 655 aa19.52■□□□□ 0.72
RPS28-201ENST00000417088 ZNF34Q8IZ26 560 aa19.52■□□□□ 0.72
RPS28-201ENST00000417088 SYNE4Q8N205 404 aa19.52■□□□□ 0.72
RPS28-201ENST00000417088 IARSP41252 1262 aaKnown RBP19.51■□□□□ 0.71
RPS28-201ENST00000417088 PDIA6Q15084 440 aa19.51■□□□□ 0.71
RPS28-201ENST00000417088 GIGYF2Q6Y7W6 1299 aaKnown RBP19.51■□□□□ 0.71
RPS28-201ENST00000417088 LRP10Q7Z4F1 713 aa19.51■□□□□ 0.71
RPS28-201ENST00000417088 TAF1DQ9H5J8 278 aaPredicted RBP19.51■□□□□ 0.71
RPS28-201ENST00000417088 IBTKQ9P2D0 1353 aaPredicted RBP19.51■□□□□ 0.71
RPS28-201ENST00000417088 SNED1Q8TER0 1413 aa19.51■□□□□ 0.71
RPS28-201ENST00000417088 HOXA10P31260 410 aaPredicted RBP19.5■□□□□ 0.71
RPS28-201ENST00000417088 COL13A1Q5TAT6 717 aaPredicted RBP19.5■□□□□ 0.71
RPS28-201ENST00000417088 RIC1Q4ADV7 1423 aa19.5■□□□□ 0.71
RPS28-201ENST00000417088 NTSR2O95665 410 aa19.49■□□□□ 0.71
RPS28-201ENST00000417088 EIF2S2P20042 333 aaKnown RBP19.49■□□□□ 0.71
RPS28-201ENST00000417088 TMPOP42166 694 aaKnown RBP19.49■□□□□ 0.71
RPS28-201ENST00000417088 LDHDQ86WU2 507 aa19.49■□□□□ 0.71
RPS28-201ENST00000417088 PSMD1Q99460 953 aa19.49■□□□□ 0.71
RPS28-201ENST00000417088 FZD9O00144 591 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms