RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 PCDHB15Q9Y5E8 787 aa16.29■□□□□ 0.2
HNF4A-204ENST00000415691 HOXB7P09629 217 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 CCDC30Q5VVM6 783 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
HNF4A-204ENST00000415691 SBF2Q86WG5 1849 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 SIK1P57059 783 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 G2E3Q7L622 706 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 SPRYD3Q8NCJ5 442 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 ANP32BQ92688 251 aaKnown RBP16.28■□□□□ 0.2
HNF4A-204ENST00000415691 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
HNF4A-204ENST00000415691 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
HNF4A-204ENST00000415691 NHSQ6T4R5 1651 aa16.27■□□□□ 0.2
HNF4A-204ENST00000415691 PROSER3Q2NL68 480 aa16.27■□□□□ 0.2
HNF4A-204ENST00000415691 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.2
HNF4A-204ENST00000415691 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
HNF4A-204ENST00000415691 A1BGP04217 495 aa16.27■□□□□ 0.19
HNF4A-204ENST00000415691 MSNP26038 577 aaKnown RBP16.27■□□□□ 0.19
HNF4A-204ENST00000415691 ITPK1Q13572 414 aa16.27■□□□□ 0.19
HNF4A-204ENST00000415691 UBR2Q8IWV8 1755 aa16.26■□□□□ 0.19
HNF4A-204ENST00000415691 SOS1Q07889 1333 aaPredicted RBP16.26■□□□□ 0.19
HNF4A-204ENST00000415691 RBM25P49756 843 aaKnown RBP16.26■□□□□ 0.19
HNF4A-204ENST00000415691 PDIA6Q15084 440 aa16.26■□□□□ 0.19
HNF4A-204ENST00000415691 C5P01031 1676 aa16.25■□□□□ 0.19
HNF4A-204ENST00000415691 NASPP49321 788 aaPredicted RBP16.25■□□□□ 0.19
HNF4A-204ENST00000415691 CLEC17AQ6ZS10 378 aa16.25■□□□□ 0.19
HNF4A-204ENST00000415691 PHAXQ9H814 394 aaKnown RBP16.25■□□□□ 0.19
HNF4A-204ENST00000415691 BTAF1O14981 1849 aa16.25■□□□□ 0.19
HNF4A-204ENST00000415691 ZNF500O60304 480 aaPredicted RBP16.25■□□□□ 0.19
HNF4A-204ENST00000415691 MYL6BP14649 208 aa16.25■□□□□ 0.19
HNF4A-204ENST00000415691 STK31Q9BXU1 1019 aa16.25■□□□□ 0.19
HNF4A-204ENST00000415691 APBA3O96018 575 aa16.24■□□□□ 0.19
HNF4A-204ENST00000415691 NBPF26B4DH59 902 aa16.24■□□□□ 0.19
HNF4A-204ENST00000415691 CYP19A1P11511 503 aaPredicted RBP16.24■□□□□ 0.19
HNF4A-204ENST00000415691 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
HNF4A-204ENST00000415691 NBPF10Q6P3W6 841 aaKnown RBP16.24■□□□□ 0.19
HNF4A-204ENST00000415691 NBPF15Q8N660 670 aa16.24■□□□□ 0.19
HNF4A-204ENST00000415691 BRPF1P55201 1214 aaPredicted RBP16.23■□□□□ 0.19
HNF4A-204ENST00000415691 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
HNF4A-204ENST00000415691 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
HNF4A-204ENST00000415691 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
HNF4A-204ENST00000415691 RBM10P98175 930 aaKnown RBP16.22■□□□□ 0.19
HNF4A-204ENST00000415691 PROM2Q8N271 834 aa16.22■□□□□ 0.19
HNF4A-204ENST00000415691 LRRC4BQ9NT99 713 aa16.22■□□□□ 0.19
HNF4A-204ENST00000415691 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
HNF4A-204ENST00000415691 DYNC1I1O14576 645 aa16.22■□□□□ 0.19
HNF4A-204ENST00000415691 STARD3NLO95772 234 aa16.22■□□□□ 0.19
HNF4A-204ENST00000415691 LINC00116Q8NCU8 138 aa16.22■□□□□ 0.19
HNF4A-204ENST00000415691 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
HNF4A-204ENST00000415691 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
HNF4A-204ENST00000415691 LRP10Q7Z4F1 713 aa16.21■□□□□ 0.19
HNF4A-204ENST00000415691 MCM5P33992 734 aa16.2■□□□□ 0.18
HNF4A-204ENST00000415691 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
HNF4A-204ENST00000415691 KLHL40Q2TBA0 621 aa16.2■□□□□ 0.18
HNF4A-204ENST00000415691 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
HNF4A-204ENST00000415691 TRIM27P14373 513 aa16.2■□□□□ 0.18
HNF4A-204ENST00000415691 FLIIQ13045 1269 aa16.2■□□□□ 0.18
HNF4A-204ENST00000415691 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
HNF4A-204ENST00000415691 UTP14CQ5TAP6 766 aaKnown RBP16.2■□□□□ 0.18
HNF4A-204ENST00000415691 INTS5Q6P9B9 1019 aaKnown RBP16.2■□□□□ 0.18
HNF4A-204ENST00000415691 GOLGA6L22H0YM25 854 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 RLBP1P12271 317 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 ZNF445P59923 1031 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 HDAC1Q13547 482 aaPredicted RBP16.19■□□□□ 0.18
HNF4A-204ENST00000415691 CHMP4AQ9BY43 222 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 CRKLP46109 303 aaKnown RBP16.19■□□□□ 0.18
HNF4A-204ENST00000415691 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 SMIM5Q71RC9 77 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
HNF4A-204ENST00000415691 ZNF330Q9Y3S2 320 aaPredicted RBP16.19■□□□□ 0.18
HNF4A-204ENST00000415691 F6X3S4 739 aa16.18■□□□□ 0.18
HNF4A-204ENST00000415691 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
HNF4A-204ENST00000415691 XAGE3Q8WTP9 111 aa16.18■□□□□ 0.18
HNF4A-204ENST00000415691 PDLIM2Q96JY6 352 aa16.18■□□□□ 0.18
HNF4A-204ENST00000415691 TJP1Q07157 1748 aa16.18■□□□□ 0.18
HNF4A-204ENST00000415691 PLSCR1O15162 318 aa16.18■□□□□ 0.18
HNF4A-204ENST00000415691 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
HNF4A-204ENST00000415691 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
HNF4A-204ENST00000415691 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
HNF4A-204ENST00000415691 FKBP5Q13451 457 aaPredicted RBP16.17■□□□□ 0.18
HNF4A-204ENST00000415691 FAM13BQ9NYF5 915 aa16.17■□□□□ 0.18
HNF4A-204ENST00000415691 ARHGAP45Q92619 1136 aa16.17■□□□□ 0.18
HNF4A-204ENST00000415691 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
HNF4A-204ENST00000415691 EN1Q05925 392 aaPredicted RBP16.16■□□□□ 0.18
HNF4A-204ENST00000415691 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
HNF4A-204ENST00000415691 R3HCC1Q9Y3T6 440 aaKnown RBP16.16■□□□□ 0.18
HNF4A-204ENST00000415691 DZIP1LQ8IYY4 767 aaKnown RBP16.16■□□□□ 0.18
HNF4A-204ENST00000415691 PTPRCP08575 1304 aa16.15■□□□□ 0.18
HNF4A-204ENST00000415691 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
HNF4A-204ENST00000415691 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
HNF4A-204ENST00000415691 EZH2Q15910 746 aaKnown RBP16.15■□□□□ 0.18
HNF4A-204ENST00000415691 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
HNF4A-204ENST00000415691 UQCRHLA0A096LP55 91 aa16.14■□□□□ 0.18
HNF4A-204ENST00000415691 UQCRHP07919 91 aa16.14■□□□□ 0.18
HNF4A-204ENST00000415691 DEFB132Q7Z7B7 95 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms