RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 ZNF496Q96IT1 587 aaPredicted RBP21.68■■□□□ 1.06
PMS2P4-201ENST00000412466 ZBED9Q6R2W3 1325 aa21.68■■□□□ 1.06
PMS2P4-201ENST00000412466 ZC3H4Q9UPT8 1303 aaKnown RBP21.67■■□□□ 1.06
PMS2P4-201ENST00000412466 STARD3NLO95772 234 aa21.67■■□□□ 1.06
PMS2P4-201ENST00000412466 SBF1O95248 1867 aa21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 HEG1Q9ULI3 1381 aa21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 A0A087WZG4 1122 aa21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 NFIXQ14938 502 aa21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 CHMP4AQ9BY43 222 aa21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 MBIPQ9NS73 344 aa21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
PMS2P4-201ENST00000412466 SNRPA1P09661 255 aaKnown RBP21.65■■□□□ 1.06
PMS2P4-201ENST00000412466 KCNQ3O43525 872 aa21.64■■□□□ 1.05
PMS2P4-201ENST00000412466 SERPINB2P05120 415 aa21.64■■□□□ 1.05
PMS2P4-201ENST00000412466 CANXP27824 592 aaKnown RBP21.64■■□□□ 1.05
PMS2P4-201ENST00000412466 FSTL1Q12841 308 aa21.64■■□□□ 1.05
PMS2P4-201ENST00000412466 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
PMS2P4-201ENST00000412466 SLFN5Q08AF3 891 aa21.63■■□□□ 1.05
PMS2P4-201ENST00000412466 HOXB7P09629 217 aa21.62■■□□□ 1.05
PMS2P4-201ENST00000412466 NPM2Q86SE8 214 aaKnown RBP21.61■■□□□ 1.05
PMS2P4-201ENST00000412466 TTLL6Q8N841 843 aa21.61■■□□□ 1.05
PMS2P4-201ENST00000412466 FANCIQ9NVI1 1328 aa21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 H0YIN7 160 aa21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 LMNB1P20700 586 aa21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 RASSF7Q02833 373 aa21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 C2CD5Q86YS7 1000 aa21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 TRMT2AQ8IZ69 625 aaKnown RBP21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 BCL2L12Q9HB09 334 aa21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 SPINK5Q9NQ38 1064 aaPredicted RBP21.6■■□□□ 1.05
PMS2P4-201ENST00000412466 BICDL1Q6ZP65 573 aa21.59■■□□□ 1.05
PMS2P4-201ENST00000412466 TSR2Q969E8 191 aaKnown RBP21.59■■□□□ 1.05
PMS2P4-201ENST00000412466 RRAGCQ9HB90 399 aa21.59■■□□□ 1.05
PMS2P4-201ENST00000412466 PDZRN3Q9UPQ7 1066 aa21.59■■□□□ 1.05
PMS2P4-201ENST00000412466 EIF5P55010 431 aaKnown RBP21.58■■□□□ 1.05
PMS2P4-201ENST00000412466 ZNF330Q9Y3S2 320 aaPredicted RBP21.58■■□□□ 1.05
PMS2P4-201ENST00000412466 CARMIL3Q8ND23 1372 aa21.58■■□□□ 1.04
PMS2P4-201ENST00000412466 SMC1BQ8NDV3 1235 aa21.57■■□□□ 1.04
PMS2P4-201ENST00000412466 LAMB4A4D0S4 1761 aa21.56■■□□□ 1.04
PMS2P4-201ENST00000412466 DUSP27Q5VZP5 1158 aa21.56■■□□□ 1.04
PMS2P4-201ENST00000412466 CDCA7LQ96GN5 454 aa21.56■■□□□ 1.04
PMS2P4-201ENST00000412466 ANKRD31Q8N7Z5 1873 aa21.56■■□□□ 1.04
PMS2P4-201ENST00000412466 NPHP1O15259 732 aa21.55■■□□□ 1.04
PMS2P4-201ENST00000412466 PDE6BP35913 854 aa21.55■■□□□ 1.04
PMS2P4-201ENST00000412466 IL6STP40189 918 aaPredicted RBP21.55■■□□□ 1.04
PMS2P4-201ENST00000412466 DNAJC5GQ8N7S2 189 aa21.55■■□□□ 1.04
PMS2P4-201ENST00000412466 BCORQ6W2J9 1755 aa21.55■■□□□ 1.04
PMS2P4-201ENST00000412466 COL11A2P13942 1736 aaPredicted RBP21.55■■□□□ 1.04
PMS2P4-201ENST00000412466 CCDC88AQ3V6T2 1871 aa21.54■■□□□ 1.04
PMS2P4-201ENST00000412466 CT47B1P0C2W7 299 aaPredicted RBP21.54■■□□□ 1.04
PMS2P4-201ENST00000412466 EXOSC9Q06265 439 aaKnown RBP21.54■■□□□ 1.04
PMS2P4-201ENST00000412466 C8orf58Q8NAV2 365 aa21.54■■□□□ 1.04
PMS2P4-201ENST00000412466 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
PMS2P4-201ENST00000412466 ERBB4Q15303 1308 aa21.54■■□□□ 1.04
PMS2P4-201ENST00000412466 GLTPD2A6NH11 291 aa21.53■■□□□ 1.04
PMS2P4-201ENST00000412466 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
PMS2P4-201ENST00000412466 TBC1D9BQ66K14 1250 aa21.53■■□□□ 1.04
PMS2P4-201ENST00000412466 ZNF622Q969S3 477 aaKnown RBP eCLIP21.53■■□□□ 1.04
PMS2P4-201ENST00000412466 KLRG1Q96E93 195 aa21.53■■□□□ 1.04
PMS2P4-201ENST00000412466 YTHDC1Q96MU7 727 aaKnown RBP21.53■■□□□ 1.04
PMS2P4-201ENST00000412466 BRIP1Q9BX63 1249 aa21.53■■□□□ 1.04
PMS2P4-201ENST00000412466 VEGFAP15692 232 aaPredicted RBP21.52■■□□□ 1.04
PMS2P4-201ENST00000412466 ZNF428Q96B54 188 aa21.52■■□□□ 1.04
PMS2P4-201ENST00000412466 CACNA1FO60840 1977 aa21.51■■□□□ 1.03
PMS2P4-201ENST00000412466 ST5P78524 1137 aa21.51■■□□□ 1.03
PMS2P4-201ENST00000412466 KRT24Q2M2I5 525 aa21.51■■□□□ 1.03
PMS2P4-201ENST00000412466 PRR5LQ6MZQ0 368 aa21.51■■□□□ 1.03
PMS2P4-201ENST00000412466 CNBD1Q8NA66 436 aa21.51■■□□□ 1.03
PMS2P4-201ENST00000412466 TBC1D2BQ9UPU7 963 aa21.51■■□□□ 1.03
PMS2P4-201ENST00000412466 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 NFKBIEO00221 500 aa21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 ELL2O00472 640 aaPredicted RBP21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 HDGFL1Q5TGJ6 251 aa21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 CCDC30Q5VVM6 783 aa21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 SETDB2Q96T68 719 aa21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 DICER1Q9UPY3 1922 aaKnown RBP21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 ARFGEF2Q9Y6D5 1785 aa21.5■■□□□ 1.03
PMS2P4-201ENST00000412466 VAMP4O75379 141 aa21.49■■□□□ 1.03
PMS2P4-201ENST00000412466 DPY19L2Q6NUT2 758 aa21.49■■□□□ 1.03
PMS2P4-201ENST00000412466 TSPYL6Q8N831 410 aa21.49■■□□□ 1.03
PMS2P4-201ENST00000412466 CACNA1SQ13698 1873 aa21.49■■□□□ 1.03
PMS2P4-201ENST00000412466 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
PMS2P4-201ENST00000412466 A1BGP04217 495 aa21.48■■□□□ 1.03
PMS2P4-201ENST00000412466 HTRA3P83110 453 aa21.48■■□□□ 1.03
PMS2P4-201ENST00000412466 DBF4Q9UBU7 674 aaPredicted RBP21.48■■□□□ 1.03
PMS2P4-201ENST00000412466 CAMTA2O94983 1202 aa21.47■■□□□ 1.03
PMS2P4-201ENST00000412466 SOGA3Q5TF21 947 aa21.47■■□□□ 1.03
PMS2P4-201ENST00000412466 DZIP3Q86Y13 1208 aaKnown RBP21.47■■□□□ 1.03
PMS2P4-201ENST00000412466 JMYQ8N9B5 988 aa21.47■■□□□ 1.03
PMS2P4-201ENST00000412466 CNKSR1Q969H4 720 aa21.47■■□□□ 1.03
PMS2P4-201ENST00000412466 ZNF652Q9Y2D9 606 aa21.47■■□□□ 1.03
PMS2P4-201ENST00000412466 C21orf2O43822 256 aa21.46■■□□□ 1.03
PMS2P4-201ENST00000412466 PRELPP51888 382 aa21.46■■□□□ 1.03
PMS2P4-201ENST00000412466 STK31Q9BXU1 1019 aa21.46■■□□□ 1.03
PMS2P4-201ENST00000412466 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.03
PMS2P4-201ENST00000412466 ZNF219Q9P2Y4 722 aaPredicted RBP21.46■■□□□ 1.03
PMS2P4-201ENST00000412466 STYK1Q6J9G0 422 aa21.45■■□□□ 1.02
PMS2P4-201ENST00000412466 TAOK3Q9H2K8 898 aa21.45■■□□□ 1.02
PMS2P4-201ENST00000412466 HYPKQ9NX55 129 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms