RNA–Protein interactions for RNA: ENST00000410411.1

RN7SKP139-201, Transcript of RNA, 7SK small nuclear pseudogene 139, humanhuman

BASIC

Gene RN7SKP139, Length 293 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP139-201ENST00000410411 NCLP19338 710 aaKnown RBP10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 CSPP1Q1MSJ5 1256 aa10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 SYAP1Q96A49 352 aaPredicted RBP10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 CHMP4CQ96CF2 233 aa10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 TMX3Q96JJ7 454 aa10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 RBM42Q9BTD8 480 aaKnown RBP10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 METTL22Q9BUU2 404 aaPredicted RBP10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 AXIN2Q9Y2T1 843 aa10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 DDX49Q9Y6V7 483 aaKnown RBP10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 WDR33Q9C0J8 1336 aaKnown RBP10.28□□□□□ -0.76
RN7SKP139-201ENST00000410411 RFX7Q2KHR2 1363 aa10.27□□□□□ -0.76
RN7SKP139-201ENST00000410411 PHF14O94880 888 aa10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 ZKSCAN1P17029 563 aaPredicted RBP10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 PSMA5P28066 241 aa10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 ZNF445P59923 1031 aa10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 ANKRD1Q15327 319 aa10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 ANKRD13DQ6ZTN6 518 aa10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 GRPEL1Q9HAV7 217 aa10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 SH2B1Q9NRF2 756 aaPredicted RBP10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
RN7SKP139-201ENST00000410411 LAMB4A4D0S4 1761 aa10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 PXDNQ92626 1479 aa10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 CSB-PGBD3P0DP91 1061 aa10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 KCNB2Q92953 911 aa10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 TEX13AQ9BXU3 409 aaPredicted RBP10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 ALDH8A1Q9H2A2 487 aaPredicted RBP10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 IL1RAPL2Q9NP60 686 aa10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 COPRSQ9NQ92 184 aa10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 LIMCH1Q9UPQ0 1083 aa10.26□□□□□ -0.77
RN7SKP139-201ENST00000410411 KCNQ3O43525 872 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 LETM1O95202 739 aaPredicted RBP10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 XRCC6P12956 609 aaKnown RBP eCLIP10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 SSFA2P28290 1259 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 CABP4P57796 275 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 ZC3H6P61129 1189 aaKnown RBP10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 GCKRQ14397 625 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 PDIA6Q15084 440 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 VPS53Q5VIR6 699 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 PLBD2Q8NHP8 589 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 GPR108Q9NPR9 543 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 ATG3Q9NT62 314 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 HMG20BQ9P0W2 317 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 FBXO3Q9UK99 471 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
RN7SKP139-201ENST00000410411 NEURL1BA8MQ27 555 aa10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 BRD1O95696 1058 aa10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 KRT32Q14532 448 aa10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 LRRFIP1Q32MZ4 808 aaKnown RBP10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 NFATC2IPQ8NCF5 419 aa10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 LSG1Q9H089 658 aaKnown RBP10.24□□□□□ -0.77
RN7SKP139-201ENST00000410411 PDCP20941 246 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 XPCQ01831 940 aaPredicted RBP10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 CCDC173Q0VFZ6 552 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 TSGA10IPQ3SY00 556 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 RABL6Q3YEC7 729 aaPredicted RBP10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 HS1BP3Q53T59 392 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 MCTP1Q6DN14 999 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 TRIM44Q96DX7 344 aaPredicted RBP10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 RBM33Q96EV2 1170 aaKnown RBP10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 LMBRD1Q9NUN5 540 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 CYP46A1Q9Y6A2 500 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 WDR17Q8IZU2 1322 aa10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 AFDNP55196 1824 aaKnown RBP10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 KDM6AO15550 1401 aaPredicted RBP10.23□□□□□ -0.77
RN7SKP139-201ENST00000410411 ATP5JP18859 108 aa10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 COPS6Q7L5N1 327 aa10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 AACSQ86V21 672 aa10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 ZCRB1Q8TBF4 217 aaKnown RBP10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 CARD10Q9BWT7 1032 aa10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 GZF1Q9H116 711 aaPredicted RBP10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 BICC1Q9H694 974 aaKnown RBP10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 BRPF3Q9ULD4 1205 aa10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 SNX14Q9Y5W7 946 aa10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 C5P01031 1676 aa10.22□□□□□ -0.77
RN7SKP139-201ENST00000410411 STRCP1A6NGW2 1772 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 IGKV5-2P06315 115 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 CCDC191Q8NCU4 936 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 MAP4K1Q92918 833 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 SUCLG2Q96I99 432 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 ZNF496Q96IT1 587 aaPredicted RBP10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 TTC14Q96N46 770 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 FOXD4L1Q9NU39 408 aa10.21□□□□□ -0.77
RN7SKP139-201ENST00000410411 SOS2Q07890 1332 aaPredicted RBP10.21□□□□□ -0.78
RN7SKP139-201ENST00000410411 UBR2Q8IWV8 1755 aa10.21□□□□□ -0.78
RN7SKP139-201ENST00000410411 ARFGEF2Q9Y6D5 1785 aa10.21□□□□□ -0.78
RN7SKP139-201ENST00000410411 CYP27B1O15528 508 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 MEGF6O75095 1541 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 KCNJ4P48050 445 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 AIMP1Q12904 312 aaKnown RBP10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 NECTIN1Q15223 517 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 PROSER3Q2NL68 480 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 CWF19L2Q2TBE0 894 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms