RNA–Protein interactions for RNA: ENST00000410411.1

RN7SKP139-201, Transcript of RNA, 7SK small nuclear pseudogene 139, humanhuman

BASIC

Gene RN7SKP139, Length 293 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP139-201ENST00000410411 NISCHQ9Y2I1 1504 aa18.07■□□□□ 0.48
RN7SKP139-201ENST00000410411 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
RN7SKP139-201ENST00000410411 ZCCHC6Q5VYS8 1495 aaKnown RBP15.25■□□□□ 0.03
RN7SKP139-201ENST00000410411 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0.01
RN7SKP139-201ENST00000410411 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
RN7SKP139-201ENST00000410411 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
RN7SKP139-201ENST00000410411 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
RN7SKP139-201ENST00000410411 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
RN7SKP139-201ENST00000410411 NACADO15069 1562 aa14.49□□□□□ -0.09
RN7SKP139-201ENST00000410411 ABCC9O60706 1549 aa14.34□□□□□ -0.11
RN7SKP139-201ENST00000410411 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
RN7SKP139-201ENST00000410411 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
RN7SKP139-201ENST00000410411 CHIC1Q5VXU3 224 aa14.23□□□□□ -0.13
RN7SKP139-201ENST00000410411 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
RN7SKP139-201ENST00000410411 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP139-201ENST00000410411 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
RN7SKP139-201ENST00000410411 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
RN7SKP139-201ENST00000410411 UNC13AQ9UPW8 1703 aa13.85□□□□□ -0.19
RN7SKP139-201ENST00000410411 WIZO95785 1651 aa13.79□□□□□ -0.2
RN7SKP139-201ENST00000410411 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
RN7SKP139-201ENST00000410411 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
RN7SKP139-201ENST00000410411 TOP2AP11388 1531 aaKnown RBP13.75□□□□□ -0.21
RN7SKP139-201ENST00000410411 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
RN7SKP139-201ENST00000410411 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
RN7SKP139-201ENST00000410411 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
RN7SKP139-201ENST00000410411 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
RN7SKP139-201ENST00000410411 LOC105371045A0A1W2PR82 267 aa13.59□□□□□ -0.23
RN7SKP139-201ENST00000410411 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
RN7SKP139-201ENST00000410411 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
RN7SKP139-201ENST00000410411 HRCP23327 699 aa13.54□□□□□ -0.24
RN7SKP139-201ENST00000410411 EEA1Q15075 1411 aa13.54□□□□□ -0.24
RN7SKP139-201ENST00000410411 PCGF6Q9BYE7 350 aa13.49□□□□□ -0.25
RN7SKP139-201ENST00000410411 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
RN7SKP139-201ENST00000410411 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
RN7SKP139-201ENST00000410411 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
RN7SKP139-201ENST00000410411 ZEB1P37275 1124 aaPredicted RBP13.4□□□□□ -0.26
RN7SKP139-201ENST00000410411 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
RN7SKP139-201ENST00000410411 HMGXB3Q12766 1538 aa13.36□□□□□ -0.27
RN7SKP139-201ENST00000410411 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
RN7SKP139-201ENST00000410411 WRNQ14191 1432 aaPredicted RBP eCLIP13.33□□□□□ -0.28
RN7SKP139-201ENST00000410411 NCAPD3P42695 1498 aa13.33□□□□□ -0.28
RN7SKP139-201ENST00000410411 ABCC8Q09428 1581 aa13.32□□□□□ -0.28
RN7SKP139-201ENST00000410411 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
RN7SKP139-201ENST00000410411 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
RN7SKP139-201ENST00000410411 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
RN7SKP139-201ENST00000410411 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
RN7SKP139-201ENST00000410411 KIF21BO75037 1637 aa13.22□□□□□ -0.29
RN7SKP139-201ENST00000410411 TOP2BQ02880 1626 aa13.2□□□□□ -0.3
RN7SKP139-201ENST00000410411 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
RN7SKP139-201ENST00000410411 SOGA1O94964 1423 aa13.19□□□□□ -0.3
RN7SKP139-201ENST00000410411 CEP162Q5TB80 1403 aa13.17□□□□□ -0.3
RN7SKP139-201ENST00000410411 SYNJ1O43426 1573 aa13.16□□□□□ -0.3
RN7SKP139-201ENST00000410411 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
RN7SKP139-201ENST00000410411 CFTRP13569 1480 aa13.12□□□□□ -0.31
RN7SKP139-201ENST00000410411 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
RN7SKP139-201ENST00000410411 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
RN7SKP139-201ENST00000410411 RUSC2Q8N2Y8 1516 aa13.06□□□□□ -0.32
RN7SKP139-201ENST00000410411 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
RN7SKP139-201ENST00000410411 KIF27Q86VH2 1401 aa13.02□□□□□ -0.33
RN7SKP139-201ENST00000410411 CLIP1P30622 1438 aa13.01□□□□□ -0.33
RN7SKP139-201ENST00000410411 CADPSQ9ULU8 1353 aa12.99□□□□□ -0.33
RN7SKP139-201ENST00000410411 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
RN7SKP139-201ENST00000410411 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
RN7SKP139-201ENST00000410411 APLP2Q06481 763 aa12.97□□□□□ -0.33
RN7SKP139-201ENST00000410411 CUX1P39880 1505 aa12.97□□□□□ -0.33
RN7SKP139-201ENST00000410411 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
RN7SKP139-201ENST00000410411 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
RN7SKP139-201ENST00000410411 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
RN7SKP139-201ENST00000410411 CCER1Q8TC90 406 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP139-201ENST00000410411 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
RN7SKP139-201ENST00000410411 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
RN7SKP139-201ENST00000410411 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
RN7SKP139-201ENST00000410411 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
RN7SKP139-201ENST00000410411 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
RN7SKP139-201ENST00000410411 IGF1RP08069 1367 aa12.79□□□□□ -0.36
RN7SKP139-201ENST00000410411 CUX2O14529 1486 aa12.78□□□□□ -0.36
RN7SKP139-201ENST00000410411 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
RN7SKP139-201ENST00000410411 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
RN7SKP139-201ENST00000410411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 CUL7Q14999 1698 aa12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 ABCA10Q8WWZ4 1543 aa12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
RN7SKP139-201ENST00000410411 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
RN7SKP139-201ENST00000410411 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
RN7SKP139-201ENST00000410411 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
RN7SKP139-201ENST00000410411 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
RN7SKP139-201ENST00000410411 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
RN7SKP139-201ENST00000410411 RRBP1Q9P2E9 1410 aaKnown RBP12.67□□□□□ -0.38
RN7SKP139-201ENST00000410411 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP139-201ENST00000410411 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
RN7SKP139-201ENST00000410411 WDR97A6NE52 1622 aa12.63□□□□□ -0.39
RN7SKP139-201ENST00000410411 CTTNBP2Q8WZ74 1663 aa12.63□□□□□ -0.39
RN7SKP139-201ENST00000410411 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
RN7SKP139-201ENST00000410411 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP139-201ENST00000410411 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
RN7SKP139-201ENST00000410411 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
RN7SKP139-201ENST00000410411 CCNB3Q8WWL7 1395 aa12.58□□□□□ -0.4
RN7SKP139-201ENST00000410411 ZNF316A6NFI3 1004 aaPredicted RBP12.58□□□□□ -0.4
RN7SKP139-201ENST00000410411 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
RN7SKP139-201ENST00000410411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms