RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.54
SSFA2-202ENST00000409001 ANAPC15P60006 121 aa18.39■□□□□ 0.53
SSFA2-202ENST00000409001 HAND2P61296 217 aa18.39■□□□□ 0.53
SSFA2-202ENST00000409001 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
SSFA2-202ENST00000409001 COL17A1Q9UMD9 1497 aaPredicted RBP18.39■□□□□ 0.53
SSFA2-202ENST00000409001 UVSSAQ2YD98 709 aa18.39■□□□□ 0.53
SSFA2-202ENST00000409001 SOGA3Q5TF21 947 aa18.39■□□□□ 0.53
SSFA2-202ENST00000409001 BRF1Q92994 677 aa18.39■□□□□ 0.53
SSFA2-202ENST00000409001 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
SSFA2-202ENST00000409001 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
SSFA2-202ENST00000409001 POLR3DP05423 398 aaPredicted RBP18.38■□□□□ 0.53
SSFA2-202ENST00000409001 TOP1P11387 765 aaKnown RBP18.38■□□□□ 0.53
SSFA2-202ENST00000409001 ZFYVE27Q5T4F4 411 aa18.38■□□□□ 0.53
SSFA2-202ENST00000409001 RAB11FIP4Q86YS3 637 aa18.38■□□□□ 0.53
SSFA2-202ENST00000409001 IGHMBP2P38935 993 aaKnown RBP18.38■□□□□ 0.53
SSFA2-202ENST00000409001 TEX14Q8IWB6 1497 aa18.38■□□□□ 0.53
SSFA2-202ENST00000409001 SSBP05455 408 aaKnown RBP eCLIP18.38■□□□□ 0.53
SSFA2-202ENST00000409001 TMCO3Q6UWJ1 677 aa18.38■□□□□ 0.53
SSFA2-202ENST00000409001 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
SSFA2-202ENST00000409001 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
SSFA2-202ENST00000409001 CCDC181Q5TID7 509 aa18.37■□□□□ 0.53
SSFA2-202ENST00000409001 ZBTB7BO15156 539 aaPredicted RBP18.37■□□□□ 0.53
SSFA2-202ENST00000409001 RBM8AQ9Y5S9 174 aaKnown RBP18.37■□□□□ 0.53
SSFA2-202ENST00000409001 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
SSFA2-202ENST00000409001 EIF5P55010 431 aaKnown RBP18.37■□□□□ 0.53
SSFA2-202ENST00000409001 BICDL1Q6ZP65 573 aa18.36■□□□□ 0.53
SSFA2-202ENST00000409001 EIF3JO75822 258 aaKnown RBP18.36■□□□□ 0.53
SSFA2-202ENST00000409001 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
SSFA2-202ENST00000409001 ORC3Q9UBD5 711 aaPredicted RBP18.36■□□□□ 0.53
SSFA2-202ENST00000409001 CEP131Q9UPN4 1083 aa18.36■□□□□ 0.53
SSFA2-202ENST00000409001 POGZQ7Z3K3 1410 aa18.36■□□□□ 0.53
SSFA2-202ENST00000409001 DNM1Q05193 864 aaKnown RBP18.36■□□□□ 0.53
SSFA2-202ENST00000409001 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
SSFA2-202ENST00000409001 ISM2Q6H9L7 571 aa18.36■□□□□ 0.53
SSFA2-202ENST00000409001 ITSN2Q9NZM3 1697 aa18.36■□□□□ 0.53
SSFA2-202ENST00000409001 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 ODF2Q5BJF6 829 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 CNNM3Q8NE01 707 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 ZSCAN12O43309 604 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 TTC12Q9H892 705 aaPredicted RBP18.35■□□□□ 0.53
SSFA2-202ENST00000409001 HMG20BQ9P0W2 317 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 A0A1W2PP64 1363 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 STX1AQ16623 288 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 CCDC102AQ96A19 550 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 TSPYL1Q9H0U9 437 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
SSFA2-202ENST00000409001 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
SSFA2-202ENST00000409001 TMC6Q7Z403 805 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 SLC12A7Q9Y666 1083 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 IFIT3O14879 490 aaKnown RBP18.34■□□□□ 0.53
SSFA2-202ENST00000409001 PUS7Q96PZ0 661 aaKnown RBP18.34■□□□□ 0.53
SSFA2-202ENST00000409001 WDR62O43379 1518 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 FAM193AP78312 1265 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 OTUD7AQ8TE49 926 aaPredicted RBP18.34■□□□□ 0.53
SSFA2-202ENST00000409001 PA2G4Q9UQ80 394 aaKnown RBP18.34■□□□□ 0.53
SSFA2-202ENST00000409001 ZKSCAN5Q9Y2L8 839 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 CCDC196A0A1B0GTZ2 297 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 GPTP24298 496 aa18.34■□□□□ 0.53
SSFA2-202ENST00000409001 LUC7LQ9NQ29 371 aaKnown RBP18.34■□□□□ 0.53
SSFA2-202ENST00000409001 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.53
SSFA2-202ENST00000409001 DACT1Q9NYF0 836 aa18.33■□□□□ 0.53
SSFA2-202ENST00000409001 MAP3K12Q12852 859 aa18.33■□□□□ 0.53
SSFA2-202ENST00000409001 ANKRD13DQ6ZTN6 518 aa18.33■□□□□ 0.53
SSFA2-202ENST00000409001 CPLX3Q8WVH0 158 aa18.33■□□□□ 0.53
SSFA2-202ENST00000409001 PRM3Q9NNZ6 103 aa18.33■□□□□ 0.53
SSFA2-202ENST00000409001 GOLGA8AA7E2F4 631 aa18.33■□□□□ 0.52
SSFA2-202ENST00000409001 TRMT112Q9UI30 125 aaKnown RBP18.33■□□□□ 0.52
SSFA2-202ENST00000409001 A2MP01023 1474 aa18.33■□□□□ 0.52
SSFA2-202ENST00000409001 DYNC1I1O14576 645 aa18.33■□□□□ 0.52
SSFA2-202ENST00000409001 F13A1P00488 732 aa18.33■□□□□ 0.52
SSFA2-202ENST00000409001 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.52
SSFA2-202ENST00000409001 MICU3Q86XE3 530 aa18.33■□□□□ 0.52
SSFA2-202ENST00000409001 NEMFO60524 1076 aa18.32■□□□□ 0.52
SSFA2-202ENST00000409001 KIAA1328Q86T90 577 aa18.32■□□□□ 0.52
SSFA2-202ENST00000409001 CTTNBP2Q8WZ74 1663 aa18.32■□□□□ 0.52
SSFA2-202ENST00000409001 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
SSFA2-202ENST00000409001 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
SSFA2-202ENST00000409001 LDHAL6AQ6ZMR3 332 aa18.32■□□□□ 0.52
SSFA2-202ENST00000409001 CCDC186Q7Z3E2 898 aa18.32■□□□□ 0.52
SSFA2-202ENST00000409001 RANBP6O60518 1105 aaKnown RBP18.31■□□□□ 0.52
SSFA2-202ENST00000409001 PPP4R3BQ5MIZ7 849 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 ANO6Q4KMQ2 910 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 AK2P54819 239 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 GSDMDP57764 484 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 FAM200AQ8TCP9 573 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 TMX1Q9H3N1 280 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 NUTM2BA6NNL0 878 aaPredicted RBP18.31■□□□□ 0.52
SSFA2-202ENST00000409001 NUTM2EB1AL46 878 aaPredicted RBP18.31■□□□□ 0.52
SSFA2-202ENST00000409001 NUTM2AQ8IVF1 878 aaPredicted RBP18.31■□□□□ 0.52
SSFA2-202ENST00000409001 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
SSFA2-202ENST00000409001 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
SSFA2-202ENST00000409001 SPDYE4A6NLX3 237 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 GRM8O00222 908 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
SSFA2-202ENST00000409001 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
SSFA2-202ENST00000409001 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms