RNA–Protein interactions for RNA: ENST00000407847.4

PRDM6-201, Transcript of PR/SET domain 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRDM6, Length 9,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-201ENST00000407847 VCX3BQ9H321 246 aa17.24■□□□□ 0.35
PRDM6-201ENST00000407847 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
PRDM6-201ENST00000407847 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
PRDM6-201ENST00000407847 VIMP08670 466 aaKnown RBP17.23■□□□□ 0.35
PRDM6-201ENST00000407847 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
PRDM6-201ENST00000407847 RNF187Q5TA31 235 aaPredicted RBP17.23■□□□□ 0.35
PRDM6-201ENST00000407847 BCAP29Q9UHQ4 241 aa17.23■□□□□ 0.35
PRDM6-201ENST00000407847 CYLC1P35663 651 aaPredicted RBP17.23■□□□□ 0.35
PRDM6-201ENST00000407847 PPFIA3O75145 1194 aa17.23■□□□□ 0.35
PRDM6-201ENST00000407847 KIAA0753Q2KHM9 967 aa17.23■□□□□ 0.35
PRDM6-201ENST00000407847 ARHGAP24Q8N264 748 aa17.23■□□□□ 0.35
PRDM6-201ENST00000407847 SARNPP82979 210 aaKnown RBP17.23■□□□□ 0.35
PRDM6-201ENST00000407847 LRPPRCP42704 1394 aaKnown RBP17.22■□□□□ 0.35
PRDM6-201ENST00000407847 TTF1Q15361 905 aaPredicted RBP17.22■□□□□ 0.35
PRDM6-201ENST00000407847 GOLGA1Q92805 767 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 PDZRN3Q9UPQ7 1066 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
PRDM6-201ENST00000407847 CACNA2D3Q8IZS8 1091 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 CTNNA2P26232 953 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 LACTBP83111 547 aaPredicted RBP17.22■□□□□ 0.35
PRDM6-201ENST00000407847 CACNA1FO60840 1977 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 KRT83P78385 493 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 RAB3IL1Q8TBN0 382 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
PRDM6-201ENST00000407847 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
PRDM6-201ENST00000407847 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 FCHSD2O94868 740 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 PPP1R14CQ8TAE6 165 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 TSNAXIP1Q2TAA8 658 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 SLU7O95391 586 aaKnown RBP17.21■□□□□ 0.35
PRDM6-201ENST00000407847 VAV2P52735 878 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 ATP11AP98196 1134 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 MSANTD4Q8NCY6 345 aa17.21■□□□□ 0.35
PRDM6-201ENST00000407847 RNF168Q8IYW5 571 aaPredicted RBP17.2■□□□□ 0.34
PRDM6-201ENST00000407847 PHLDB2Q86SQ0 1253 aa17.2■□□□□ 0.34
PRDM6-201ENST00000407847 C8orf76Q96K31 380 aa17.2■□□□□ 0.34
PRDM6-201ENST00000407847 GBP1P32455 592 aa17.2■□□□□ 0.34
PRDM6-201ENST00000407847 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
PRDM6-201ENST00000407847 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
PRDM6-201ENST00000407847 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
PRDM6-201ENST00000407847 HLTFQ14527 1009 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRDM6-201ENST00000407847 TCP11L1Q9NUJ3 509 aa17.2■□□□□ 0.34
PRDM6-201ENST00000407847 HAUS2Q9NVX0 235 aa17.2■□□□□ 0.34
PRDM6-201ENST00000407847 GBP6Q6ZN66 633 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 BUB1BO60566 1050 aaPredicted RBP17.19■□□□□ 0.34
PRDM6-201ENST00000407847 STMN1P16949 149 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 ERMNQ8TAM6 284 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 KRT86O43790 486 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 EIF3DO15371 548 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRDM6-201ENST00000407847 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
PRDM6-201ENST00000407847 SAMD15Q9P1V8 674 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 A0A1W2PRG0 241 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 BMP2KLQ5H9B9 411 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
PRDM6-201ENST00000407847 CNNM1Q9NRU3 951 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 TRIM7Q9C029 511 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
PRDM6-201ENST00000407847 TDO2P48775 406 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 GABPB1Q06547 395 aaPredicted RBP17.18■□□□□ 0.34
PRDM6-201ENST00000407847 MAP3K21Q5TCX8 1036 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 LMNTD2Q8IXW0 634 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 CCDC113Q9H0I3 377 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 GMNNO75496 209 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 RBM26Q5T8P6 1007 aaKnown RBP17.18■□□□□ 0.34
PRDM6-201ENST00000407847 TCP11L2Q8N4U5 519 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 MPHOSPH8Q99549 860 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 LMAN1P49257 510 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 MLECQ14165 292 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 TRPC3Q13507 836 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 HDXQ7Z353 690 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 RASSF2P50749 326 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 KIF5AQ12840 1032 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 CFAP157Q5JU67 520 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 PPFIA1Q13136 1202 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 RASSF4Q9H2L5 321 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 USP5P45974 858 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 CUL5Q93034 780 aa17.18■□□□□ 0.34
PRDM6-201ENST00000407847 BAG4O95429 457 aaKnown RBP17.17■□□□□ 0.34
PRDM6-201ENST00000407847 IQCA1Q86XH1 822 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 TRIM14Q14142 442 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 AFAP1L2Q8N4X5 818 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 CSRNP2Q9H175 543 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 A0A1B0GUL7 405 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
PRDM6-201ENST00000407847 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 RABGAP1Q9Y3P9 1069 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 ATF3P18847 181 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 CCDC174Q6PII3 467 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
PRDM6-201ENST00000407847 GIGYF1O75420 1035 aaPredicted RBP17.16■□□□□ 0.34
PRDM6-201ENST00000407847 IL16Q14005 1332 aa17.16■□□□□ 0.34
PRDM6-201ENST00000407847 BICDL2A1A5D9 508 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms