RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ZNF335Q9H4Z2 1342 aaPredicted RBP6.96□□□□□ -1.29
HDAC9-203ENST00000406072 H3BQV1 296 aa6.96□□□□□ -1.3
HDAC9-203ENST00000406072 ATF3P18847 181 aa6.96□□□□□ -1.3
HDAC9-203ENST00000406072 LMAN1P49257 510 aa6.96□□□□□ -1.3
HDAC9-203ENST00000406072 MTHFSP49914 203 aa6.96□□□□□ -1.3
HDAC9-203ENST00000406072 AXDND1Q5T1B0 1012 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-203ENST00000406072 IFFO2Q5TF58 517 aa6.96□□□□□ -1.3
HDAC9-203ENST00000406072 FAM177A1Q8N128 213 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-203ENST00000406072 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
HDAC9-203ENST00000406072 TDO2P48775 406 aa6.96□□□□□ -1.3
HDAC9-203ENST00000406072 GABPB1Q06547 395 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-203ENST00000406072 IP6K1Q92551 441 aa6.96□□□□□ -1.3
HDAC9-203ENST00000406072 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDAC9-203ENST00000406072 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDAC9-203ENST00000406072 V9GYY5 206 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-203ENST00000406072 FSD2A1L4K1 749 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 RNF20Q5VTR2 975 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 LRSAM1Q6UWE0 723 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 CENPHQ9H3R5 247 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC9Q9Y3X0 531 aaKnown RBP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 CACNA1FO60840 1977 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 DIAPH1O60610 1272 aaKnown RBP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 BRPF1P55201 1214 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 SAFB2Q14151 953 aaKnown RBP eCLIP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 ARHGEF25Q86VW2 580 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 TXLNBQ8N3L3 684 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 DNAAF4Q8WXU2 420 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 FMNL2Q96PY5 1086 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 RSPH14Q9UHP6 348 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 DISP2A7MBM2 1401 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 CDR1P51861 262 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 SLC4A10Q6U841 1118 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 BANK1Q8NDB2 785 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC102AQ96A19 550 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 TRMT1Q9NXH9 659 aaKnown RBP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 COL5A2P05997 1499 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 KIAA0754O94854 1291 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC191Q8NCU4 936 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 ERCC4Q92889 916 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-203ENST00000406072 PLCD4Q9BRC7 762 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 RBSNQ9H1K0 784 aa6.95□□□□□ -1.3
HDAC9-203ENST00000406072 ZBTB22O15209 634 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 EIF3JO75822 258 aaKnown RBP6.94□□□□□ -1.3
HDAC9-203ENST00000406072 HSPA2P54652 639 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC70Q6NSX1 233 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 GAS2L3Q86XJ1 694 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 GGNBP2Q9H3C7 697 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 HCLS1P14317 486 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-203ENST00000406072 HOXC9P31274 260 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 RIPK4P57078 832 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 RUFY1Q96T51 708 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 MAP3K19Q56UN5 1328 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 SMC2O95347 1197 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 MCM2P49736 904 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 NGDNQ8NEJ9 315 aaKnown RBP6.94□□□□□ -1.3
HDAC9-203ENST00000406072 WDR33Q9C0J8 1336 aaKnown RBP6.94□□□□□ -1.3
HDAC9-203ENST00000406072 BCL2L12Q9HB09 334 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 PAXBP1Q9Y5B6 917 aa6.94□□□□□ -1.3
HDAC9-203ENST00000406072 ERBB4Q15303 1308 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 FAM193AP78312 1265 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 KRT28Q7Z3Y7 464 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 C17orf53Q8N3J3 647 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-203ENST00000406072 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 SLAIN2Q9P270 581 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 SLIT2O94813 1529 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 BCL9O00512 1426 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 CRB1P82279 1406 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 CEMIPQ8WUJ3 1361 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 ZNF500O60304 480 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-203ENST00000406072 ZNF428Q96B54 188 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 SDF4Q9BRK5 362 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 TNMDQ9H2S6 317 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.93□□□□□ -1.3
HDAC9-203ENST00000406072 RIOK3O14730 519 aaKnown RBP6.93□□□□□ -1.3
HDAC9-203ENST00000406072 TTC31Q49AM3 519 aaPredicted RBP6.93□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC73Q6ZRK6 1079 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 PDILTQ8N807 584 aa6.93□□□□□ -1.3
HDAC9-203ENST00000406072 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-203ENST00000406072 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 TOGARAM1Q9Y4F4 1720 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 KIAA0232Q92628 1395 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 ZNF853P0CG23 659 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 GTF2E1P29083 439 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-203ENST00000406072 SLFN5Q08AF3 891 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 RAB3GAP1Q15042 981 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 CEP135Q66GS9 1140 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 PPP1R9BQ96SB3 815 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 ERLIN1O75477 346 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 URI1O94763 535 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-203ENST00000406072 EIF4A2Q14240 407 aaKnown RBP6.92□□□□□ -1.3
HDAC9-203ENST00000406072 CCDC183Q5T5S1 534 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 ZBTB9Q96C00 473 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 KIF2AO00139 706 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-203ENST00000406072 UVSSAQ2YD98 709 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 ESCO1Q5FWF5 840 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 CHD1LQ86WJ1 897 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 GTF3C6Q969F1 213 aa6.92□□□□□ -1.3
HDAC9-203ENST00000406072 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms