RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 CNKSR1Q969H4 720 aa25.85■■□□□ 1.73
HDAC11-205ENST00000404548 SRGNP10124 158 aa25.84■■□□□ 1.73
HDAC11-205ENST00000404548 SOGA3Q5TF21 947 aa25.84■■□□□ 1.73
HDAC11-205ENST00000404548 KLRG1Q96E93 195 aa25.84■■□□□ 1.73
HDAC11-205ENST00000404548 ARFGEF2Q9Y6D5 1785 aa25.83■■□□□ 1.73
HDAC11-205ENST00000404548 C21orf2O43822 256 aa25.83■■□□□ 1.73
HDAC11-205ENST00000404548 PRAMEF22A3QJZ6 481 aa25.82■■□□□ 1.72
HDAC11-205ENST00000404548 NPHP1O15259 732 aa25.82■■□□□ 1.72
HDAC11-205ENST00000404548 JMYQ8N9B5 988 aa25.82■■□□□ 1.72
HDAC11-205ENST00000404548 MASTLQ96GX5 879 aa25.82■■□□□ 1.72
HDAC11-205ENST00000404548 TAF7Q15545 349 aaPredicted RBP25.81■■□□□ 1.72
HDAC11-205ENST00000404548 DPY19L2Q6NUT2 758 aa25.81■■□□□ 1.72
HDAC11-205ENST00000404548 CCDC24Q8N4L8 307 aa25.81■■□□□ 1.72
HDAC11-205ENST00000404548 TAOK3Q9H2K8 898 aa25.81■■□□□ 1.72
HDAC11-205ENST00000404548 CCDC88AQ3V6T2 1871 aa25.81■■□□□ 1.72
HDAC11-205ENST00000404548 DICER1Q9UPY3 1922 aaKnown RBP25.8■■□□□ 1.72
HDAC11-205ENST00000404548 KLRG2A4D1S0 409 aaPredicted RBP25.8■■□□□ 1.72
HDAC11-205ENST00000404548 PRPF40BQ6NWY9 871 aaKnown RBP25.8■■□□□ 1.72
HDAC11-205ENST00000404548 NBPF5PQ86XG9 351 aaPredicted RBP25.8■■□□□ 1.72
HDAC11-205ENST00000404548 ERFEQ4G0M1 354 aa25.79■■□□□ 1.72
HDAC11-205ENST00000404548 LAMB4A4D0S4 1761 aa25.78■■□□□ 1.72
HDAC11-205ENST00000404548 NBPF26B4DH59 902 aa25.78■■□□□ 1.72
HDAC11-205ENST00000404548 PIP4K2AP48426 406 aaPredicted RBP25.78■■□□□ 1.72
HDAC11-205ENST00000404548 DCTN1Q14203 1278 aa25.78■■□□□ 1.72
HDAC11-205ENST00000404548 NBPF10Q6P3W6 841 aaKnown RBP25.78■■□□□ 1.72
HDAC11-205ENST00000404548 NBPF15Q8N660 670 aa25.78■■□□□ 1.72
HDAC11-205ENST00000404548 SLX4Q8IY92 1834 aa25.77■■□□□ 1.72
HDAC11-205ENST00000404548 PNISRQ8TF01 805 aaKnown RBP25.77■■□□□ 1.72
HDAC11-205ENST00000404548 POTECB2RU33 542 aa25.76■■□□□ 1.71
HDAC11-205ENST00000404548 NEFMP07197 916 aa25.76■■□□□ 1.71
HDAC11-205ENST00000404548 HTRA3P83110 453 aa25.76■■□□□ 1.71
HDAC11-205ENST00000404548 TPTE2Q6XPS3 522 aa25.76■■□□□ 1.71
HDAC11-205ENST00000404548 NPR1P16066 1061 aa25.75■■□□□ 1.71
HDAC11-205ENST00000404548 C7orf43Q8WVR3 580 aa25.75■■□□□ 1.71
HDAC11-205ENST00000404548 ZNF219Q9P2Y4 722 aaPredicted RBP25.75■■□□□ 1.71
HDAC11-205ENST00000404548 NIP7Q9Y221 180 aaKnown RBP eCLIP25.74■■□□□ 1.71
HDAC11-205ENST00000404548 KDM3BQ7LBC6 1761 aa25.73■■□□□ 1.71
HDAC11-205ENST00000404548 CCDC93Q567U6 631 aa25.72■■□□□ 1.71
HDAC11-205ENST00000404548 PLEKHF1Q96S99 279 aa25.72■■□□□ 1.71
HDAC11-205ENST00000404548 ERVV-1B6SEH8 477 aa25.7■■□□□ 1.7
HDAC11-205ENST00000404548 PNNQ9H307 717 aaKnown RBP25.7■■□□□ 1.7
HDAC11-205ENST00000404548 CACNA1SQ13698 1873 aa25.69■■□□□ 1.7
HDAC11-205ENST00000404548 NFE2L2Q16236 605 aa25.69■■□□□ 1.7
HDAC11-205ENST00000404548 DLG5Q8TDM6 1919 aa25.69■■□□□ 1.7
HDAC11-205ENST00000404548 HLFQ16534 295 aa25.68■■□□□ 1.7
HDAC11-205ENST00000404548 MIS18AQ9NYP9 233 aa25.68■■□□□ 1.7
HDAC11-205ENST00000404548 RIC1Q4ADV7 1423 aa25.68■■□□□ 1.7
HDAC11-205ENST00000404548 IBTKQ9P2D0 1353 aaPredicted RBP25.68■■□□□ 1.7
HDAC11-205ENST00000404548 EIF4A1P60842 406 aaKnown RBP25.67■■□□□ 1.7
HDAC11-205ENST00000404548 FKBP4Q02790 459 aaKnown RBP eCLIP25.67■■□□□ 1.7
HDAC11-205ENST00000404548 L3MBTL3Q96JM7 780 aaPredicted RBP25.67■■□□□ 1.7
HDAC11-205ENST00000404548 NYXQ9GZU5 481 aa25.67■■□□□ 1.7
HDAC11-205ENST00000404548 IQCA1LA6NCM1 817 aa25.66■■□□□ 1.7
HDAC11-205ENST00000404548 ALDH1B1P30837 517 aa25.66■■□□□ 1.7
HDAC11-205ENST00000404548 CRY2Q49AN0 593 aa25.66■■□□□ 1.7
HDAC11-205ENST00000404548 RTKN2Q8IZC4 609 aa25.66■■□□□ 1.7
HDAC11-205ENST00000404548 ERBB4Q15303 1308 aa25.65■■□□□ 1.7
HDAC11-205ENST00000404548 MAP3K15Q6ZN16 1313 aa25.65■■□□□ 1.7
HDAC11-205ENST00000404548 DDNO94850 711 aaPredicted RBP25.65■■□□□ 1.7
HDAC11-205ENST00000404548 CHADLQ6NUI6 762 aa25.64■■□□□ 1.7
HDAC11-205ENST00000404548 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
HDAC11-205ENST00000404548 SCN4AP35499 1836 aa25.63■■□□□ 1.69
HDAC11-205ENST00000404548 SNED1Q8TER0 1413 aa25.63■■□□□ 1.69
HDAC11-205ENST00000404548 GTF2E1P29083 439 aaPredicted RBP25.62■■□□□ 1.69
HDAC11-205ENST00000404548 KIF6Q6ZMV9 814 aa25.62■■□□□ 1.69
HDAC11-205ENST00000404548 ABCC12Q96J65 1359 aa25.61■■□□□ 1.69
HDAC11-205ENST00000404548 CC2D2BQ6DHV5 1058 aa25.6■■□□□ 1.69
HDAC11-205ENST00000404548 PSMD1Q99460 953 aa25.6■■□□□ 1.69
HDAC11-205ENST00000404548 CREBZFQ9NS37 354 aa25.6■■□□□ 1.69
HDAC11-205ENST00000404548 NUP98P52948 1817 aa25.6■■□□□ 1.69
HDAC11-205ENST00000404548 FAM177BA6PVY3 158 aa25.59■■□□□ 1.69
HDAC11-205ENST00000404548 LDHDQ86WU2 507 aa25.59■■□□□ 1.69
HDAC11-205ENST00000404548 THUMPD2Q9BTF0 503 aaKnown RBP25.59■■□□□ 1.69
HDAC11-205ENST00000404548 ZNF277Q9NRM2 450 aaPredicted RBP25.59■■□□□ 1.69
HDAC11-205ENST00000404548 BABAM1Q9NWV8 329 aa25.59■■□□□ 1.69
HDAC11-205ENST00000404548 HOXA10P31260 410 aaPredicted RBP25.58■■□□□ 1.69
HDAC11-205ENST00000404548 GRIPAP1Q4V328 841 aa25.58■■□□□ 1.69
HDAC11-205ENST00000404548 TTLL7Q6ZT98 887 aa25.58■■□□□ 1.69
HDAC11-205ENST00000404548 TAF1DQ9H5J8 278 aaPredicted RBP25.58■■□□□ 1.69
HDAC11-205ENST00000404548 RRP7AQ9Y3A4 280 aaKnown RBP25.58■■□□□ 1.69
HDAC11-205ENST00000404548 IARSP41252 1262 aaKnown RBP25.57■■□□□ 1.68
HDAC11-205ENST00000404548 UBN2Q6ZU65 1347 aa25.57■■□□□ 1.68
HDAC11-205ENST00000404548 FZD9O00144 591 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 POTEIP0CG38 1075 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 POTEJP0CG39 1038 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 RALBP1Q15311 655 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 OLFM4Q6UX06 510 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 GIGYF2Q6Y7W6 1299 aaKnown RBP25.56■■□□□ 1.68
HDAC11-205ENST00000404548 ZNF34Q8IZ26 560 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 NGEFQ8N5V2 710 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 ZNF541Q9H0D2 1346 aa25.56■■□□□ 1.68
HDAC11-205ENST00000404548 MYL6BP14649 208 aa25.55■■□□□ 1.68
HDAC11-205ENST00000404548 NUTM1Q86Y26 1132 aa25.55■■□□□ 1.68
HDAC11-205ENST00000404548 PASKQ96RG2 1323 aa25.55■■□□□ 1.68
HDAC11-205ENST00000404548 COL13A1Q5TAT6 717 aaPredicted RBP25.54■■□□□ 1.68
HDAC11-205ENST00000404548 LRP10Q7Z4F1 713 aa25.54■■□□□ 1.68
HDAC11-205ENST00000404548 SYNE4Q8N205 404 aa25.54■■□□□ 1.68
HDAC11-205ENST00000404548 ZBTB3Q9H5J0 574 aa25.54■■□□□ 1.68
HDAC11-205ENST00000404548 TSPYL4Q9UJ04 414 aa25.54■■□□□ 1.68
HDAC11-205ENST00000404548 NTSR2O95665 410 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms