RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 MAP3K2Q9Y2U5 619 aa18.93■□□□□ 0.62
TOM1-203ENST00000404284 GIGYF1O75420 1035 aaPredicted RBP18.93■□□□□ 0.62
TOM1-203ENST00000404284 GLRX3O76003 335 aaKnown RBP18.93■□□□□ 0.62
TOM1-203ENST00000404284 ALDH1L1O75891 902 aa18.92■□□□□ 0.62
TOM1-203ENST00000404284 CWC27Q6UX04 472 aaKnown RBP18.92■□□□□ 0.62
TOM1-203ENST00000404284 FAM13BQ9NYF5 915 aa18.92■□□□□ 0.62
TOM1-203ENST00000404284 WDR33Q9C0J8 1336 aaKnown RBP18.92■□□□□ 0.62
TOM1-203ENST00000404284 GCP02774 474 aa18.92■□□□□ 0.62
TOM1-203ENST00000404284 OS9Q13438 667 aaPredicted RBP18.91■□□□□ 0.62
TOM1-203ENST00000404284 C1orf141Q5JVX7 400 aa18.91■□□□□ 0.62
TOM1-203ENST00000404284 AK2P54819 239 aa18.91■□□□□ 0.62
TOM1-203ENST00000404284 HS1BP3Q53T59 392 aa18.91■□□□□ 0.62
TOM1-203ENST00000404284 KSR2Q6VAB6 950 aa18.91■□□□□ 0.62
TOM1-203ENST00000404284 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
TOM1-203ENST00000404284 ADAMTS7Q9UKP4 1686 aa18.91■□□□□ 0.62
TOM1-203ENST00000404284 PRAMEF22A3QJZ6 481 aa18.9■□□□□ 0.62
TOM1-203ENST00000404284 CLASRPQ8N2M8 674 aaKnown RBP18.9■□□□□ 0.62
TOM1-203ENST00000404284 ARID3AQ99856 593 aa18.9■□□□□ 0.62
TOM1-203ENST00000404284 TCHHQ07283 1943 aa18.9■□□□□ 0.62
TOM1-203ENST00000404284 RUFY3Q7L099 469 aa18.9■□□□□ 0.62
TOM1-203ENST00000404284 CWF19L2Q2TBE0 894 aaKnown RBP18.89■□□□□ 0.62
TOM1-203ENST00000404284 GDPD2Q9HCC8 539 aa18.89■□□□□ 0.62
TOM1-203ENST00000404284 C9orf78Q9NZ63 289 aaPredicted RBP18.89■□□□□ 0.62
TOM1-203ENST00000404284 PA2G4Q9UQ80 394 aaKnown RBP18.89■□□□□ 0.62
TOM1-203ENST00000404284 LMTK3Q96Q04 1460 aa18.89■□□□□ 0.62
TOM1-203ENST00000404284 ANKRD24Q8TF21 1146 aa18.89■□□□□ 0.61
TOM1-203ENST00000404284 ECHDC1Q9NTX5 307 aa18.89■□□□□ 0.61
TOM1-203ENST00000404284 GADD45BO75293 160 aaPredicted RBP18.88■□□□□ 0.61
TOM1-203ENST00000404284 XPCQ01831 940 aaPredicted RBP18.88■□□□□ 0.61
TOM1-203ENST00000404284 FOXD4L6Q3SYB3 417 aaPredicted RBP18.88■□□□□ 0.61
TOM1-203ENST00000404284 FOXD4L3Q6VB84 417 aaPredicted RBP18.88■□□□□ 0.61
TOM1-203ENST00000404284 ORAI2Q96SN7 254 aa18.88■□□□□ 0.61
TOM1-203ENST00000404284 TRPM3Q9HCF6 1732 aaPredicted RBP18.88■□□□□ 0.61
TOM1-203ENST00000404284 DIAPH3Q9NSV4 1193 aa18.88■□□□□ 0.61
TOM1-203ENST00000404284 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
TOM1-203ENST00000404284 LIMCH1Q9UPQ0 1083 aa18.88■□□□□ 0.61
TOM1-203ENST00000404284 USP48Q86UV5 1035 aa18.87■□□□□ 0.61
TOM1-203ENST00000404284 TMEM87AQ8NBN3 555 aa18.87■□□□□ 0.61
TOM1-203ENST00000404284 PTH1RQ03431 593 aa18.87■□□□□ 0.61
TOM1-203ENST00000404284 ERC1Q8IUD2 1116 aa18.87■□□□□ 0.61
TOM1-203ENST00000404284 KAZALD1Q96I82 304 aa18.87■□□□□ 0.61
TOM1-203ENST00000404284 LARP6Q9BRS8 491 aaKnown RBP18.87■□□□□ 0.61
TOM1-203ENST00000404284 UTYO14607 1347 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 CPA1P15085 419 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 MSNP26038 577 aaKnown RBP18.86■□□□□ 0.61
TOM1-203ENST00000404284 RUFY2Q8WXA3 655 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 HYPKQ9NX55 129 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 AXIN2Q9Y2T1 843 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 LARGE1O95461 756 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 CASTP20810 708 aaKnown RBP18.86■□□□□ 0.61
TOM1-203ENST00000404284 LINS1Q8NG48 757 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 KCNB2Q92953 911 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 SYAP1Q96A49 352 aaPredicted RBP18.86■□□□□ 0.61
TOM1-203ENST00000404284 SUCLG2Q96I99 432 aa18.86■□□□□ 0.61
TOM1-203ENST00000404284 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.86■□□□□ 0.61
TOM1-203ENST00000404284 NOL7Q9UMY1 257 aaKnown RBP18.86■□□□□ 0.61
TOM1-203ENST00000404284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.86■□□□□ 0.61
TOM1-203ENST00000404284 GRM8O00222 908 aa18.85■□□□□ 0.61
TOM1-203ENST00000404284 IFIT2P09913 472 aaKnown RBP18.85■□□□□ 0.61
TOM1-203ENST00000404284 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
TOM1-203ENST00000404284 RGPD5Q99666 1765 aa18.85■□□□□ 0.61
TOM1-203ENST00000404284 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
TOM1-203ENST00000404284 HDAC5Q9UQL6 1122 aa18.85■□□□□ 0.61
TOM1-203ENST00000404284 SYT1P21579 422 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 ADCK5Q3MIX3 580 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 AACSQ86V21 672 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 RNF214Q8ND24 703 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 TSPY26PQ9H489 355 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 SASH1O94885 1247 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 PDIA6Q15084 440 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 PRDM10Q9NQV6 1147 aa18.84■□□□□ 0.61
TOM1-203ENST00000404284 DDX21Q9NR30 783 aaKnown RBP eCLIP18.84■□□□□ 0.61
TOM1-203ENST00000404284 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.84■□□□□ 0.61
TOM1-203ENST00000404284 C5P01031 1676 aa18.83■□□□□ 0.61
TOM1-203ENST00000404284 STX6O43752 255 aa18.83■□□□□ 0.61
TOM1-203ENST00000404284 PRPF40BQ6NWY9 871 aaKnown RBP18.83■□□□□ 0.61
TOM1-203ENST00000404284 BICC1Q9H694 974 aaKnown RBP18.83■□□□□ 0.61
TOM1-203ENST00000404284 CNPY2Q9Y2B0 182 aa18.83■□□□□ 0.6
TOM1-203ENST00000404284 CCDC171Q6TFL3 1326 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 OFD1O75665 1012 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 VPS53Q5VIR6 699 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 JAKMIP1Q96N16 626 aaKnown RBP18.82■□□□□ 0.6
TOM1-203ENST00000404284 MAP7D2Q96T17 732 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 TM6SF1Q9BZW5 370 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 ZSWIM6Q9HCJ5 1215 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 NECTIN1Q15223 517 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 SMAP1Q8IYB5 467 aaPredicted RBP18.82■□□□□ 0.6
TOM1-203ENST00000404284 EAF2Q96CJ1 260 aaPredicted RBP18.82■□□□□ 0.6
TOM1-203ENST00000404284 SMC3Q9UQE7 1217 aa18.82■□□□□ 0.6
TOM1-203ENST00000404284 NPHP4O75161 1426 aaPredicted RBP18.81■□□□□ 0.6
TOM1-203ENST00000404284 F13A1P00488 732 aa18.81■□□□□ 0.6
TOM1-203ENST00000404284 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
TOM1-203ENST00000404284 ERBB3P21860 1342 aa18.81■□□□□ 0.6
TOM1-203ENST00000404284 ZNF500O60304 480 aaPredicted RBP18.81■□□□□ 0.6
TOM1-203ENST00000404284 PHF14O94880 888 aa18.81■□□□□ 0.6
TOM1-203ENST00000404284 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
TOM1-203ENST00000404284 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
TOM1-203ENST00000404284 PDRG1Q9NUG6 133 aa18.81■□□□□ 0.6
TOM1-203ENST00000404284 R3HCC1Q9Y3T6 440 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms