RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 CHRNA2Q15822 529 aa20.76■□□□□ 0.91
SNED1-204ENST00000401884 NEK1Q96PY6 1258 aa20.76■□□□□ 0.91
SNED1-204ENST00000401884 PRIM1P49642 420 aaKnown RBP20.75■□□□□ 0.91
SNED1-204ENST00000401884 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
SNED1-204ENST00000401884 SNRKQ9NRH2 765 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 KCNA6P17658 529 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 C8orf76Q96K31 380 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 HOXC9P31274 260 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 BRPF1P55201 1214 aaPredicted RBP20.74■□□□□ 0.91
SNED1-204ENST00000401884 CCDC70Q6NSX1 233 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 DDX46Q7L014 1031 aaKnown RBP20.74■□□□□ 0.91
SNED1-204ENST00000401884 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 LRP2BPQ9P2M1 347 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
SNED1-204ENST00000401884 GIMAP6Q6P9H5 292 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 DDX19AQ9NUU7 478 aaKnown RBP20.74■□□□□ 0.91
SNED1-204ENST00000401884 HMG20BQ9P0W2 317 aa20.74■□□□□ 0.91
SNED1-204ENST00000401884 ADCY5O95622 1261 aa20.73■□□□□ 0.91
SNED1-204ENST00000401884 UBAC1Q9BSL1 405 aa20.73■□□□□ 0.91
SNED1-204ENST00000401884 FILIP1LQ4L180 1135 aa20.73■□□□□ 0.91
SNED1-204ENST00000401884 CNPY2Q9Y2B0 182 aa20.73■□□□□ 0.91
SNED1-204ENST00000401884 TBX22Q9Y458 520 aa20.73■□□□□ 0.91
SNED1-204ENST00000401884 MAP3K5Q99683 1374 aa20.73■□□□□ 0.91
SNED1-204ENST00000401884 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
SNED1-204ENST00000401884 PPFIA3O75145 1194 aa20.72■□□□□ 0.91
SNED1-204ENST00000401884 KDM5AP29375 1690 aaKnown RBP20.72■□□□□ 0.91
SNED1-204ENST00000401884 SLC3A2P08195 630 aaKnown RBP20.72■□□□□ 0.91
SNED1-204ENST00000401884 ABCF2Q9UG63 623 aa20.72■□□□□ 0.91
SNED1-204ENST00000401884 MYO5CQ9NQX4 1742 aa20.72■□□□□ 0.91
SNED1-204ENST00000401884 TEX35Q5T0J7 233 aa20.72■□□□□ 0.91
SNED1-204ENST00000401884 BRF1Q92994 677 aa20.71■□□□□ 0.91
SNED1-204ENST00000401884 KDM5DQ9BY66 1539 aa20.71■□□□□ 0.91
SNED1-204ENST00000401884 TTLL5Q6EMB2 1281 aa20.71■□□□□ 0.91
SNED1-204ENST00000401884 ANO10Q9NW15 660 aa20.71■□□□□ 0.91
SNED1-204ENST00000401884 CWC25Q9NXE8 425 aaPredicted RBP20.71■□□□□ 0.91
SNED1-204ENST00000401884 ZNF213O14771 459 aa20.71■□□□□ 0.91
SNED1-204ENST00000401884 CCP110O43303 1012 aa20.71■□□□□ 0.91
SNED1-204ENST00000401884 INTS4Q96HW7 963 aaKnown RBP20.71■□□□□ 0.91
SNED1-204ENST00000401884 UGGT1Q9NYU2 1555 aa20.71■□□□□ 0.91
SNED1-204ENST00000401884 MCM5P33992 734 aa20.7■□□□□ 0.9
SNED1-204ENST00000401884 TXLNAP40222 546 aa20.7■□□□□ 0.9
SNED1-204ENST00000401884 DHX8Q14562 1220 aaKnown RBP20.7■□□□□ 0.9
SNED1-204ENST00000401884 ZNF165P49910 485 aa20.7■□□□□ 0.9
SNED1-204ENST00000401884 RAI14Q9P0K7 980 aa20.7■□□□□ 0.9
SNED1-204ENST00000401884 AK2P54819 239 aa20.7■□□□□ 0.9
SNED1-204ENST00000401884 TRIM34Q9BYJ4 488 aa20.7■□□□□ 0.9
SNED1-204ENST00000401884 TTC41PQ6P2S7 1318 aa20.7■□□□□ 0.9
SNED1-204ENST00000401884 TTC37Q6PGP7 1564 aa20.69■□□□□ 0.9
SNED1-204ENST00000401884 GCP02774 474 aa20.69■□□□□ 0.9
SNED1-204ENST00000401884 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
SNED1-204ENST00000401884 BCORL1Q5H9F3 1711 aa20.69■□□□□ 0.9
SNED1-204ENST00000401884 PRDM15P57071 1507 aaPredicted RBP20.69■□□□□ 0.9
SNED1-204ENST00000401884 GPTP24298 496 aa20.69■□□□□ 0.9
SNED1-204ENST00000401884 LMBR1LQ6UX01 489 aa20.69■□□□□ 0.9
SNED1-204ENST00000401884 TRPM2O94759 1503 aa20.69■□□□□ 0.9
SNED1-204ENST00000401884 HAND2P61296 217 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 UVSSAQ2YD98 709 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 ABCC4O15439 1325 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 LRRC2Q9BYS8 371 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 NAPBQ9H115 298 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 PNMA6EA0A0J9YXQ4 647 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 DNM1Q05193 864 aaKnown RBP20.68■□□□□ 0.9
SNED1-204ENST00000401884 TRMT112Q9UI30 125 aaKnown RBP20.68■□□□□ 0.9
SNED1-204ENST00000401884 IGHMBP2P38935 993 aaKnown RBP20.68■□□□□ 0.9
SNED1-204ENST00000401884 FAM177A1Q8N128 213 aaPredicted RBP20.68■□□□□ 0.9
SNED1-204ENST00000401884 IP6K1Q92551 441 aa20.68■□□□□ 0.9
SNED1-204ENST00000401884 F13A1P00488 732 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 FSIP1Q8NA03 581 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 GOLGA8BA8MQT2 603 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 SMTNL1A8MU46 457 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 CTAGE5O15320 804 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 DACH1Q9UI36 760 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 SYNMO15061 1565 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 CFAP100Q494V2 611 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 CCDC82Q8N4S0 544 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
SNED1-204ENST00000401884 NMIQ13287 307 aaPredicted RBP20.66■□□□□ 0.9
SNED1-204ENST00000401884 WASF1Q92558 559 aa20.66■□□□□ 0.9
SNED1-204ENST00000401884 SBNO1A3KN83 1393 aa20.66■□□□□ 0.9
SNED1-204ENST00000401884 CBFA2T2O43439 604 aa20.66■□□□□ 0.9
SNED1-204ENST00000401884 USP16Q9Y5T5 823 aa20.66■□□□□ 0.9
SNED1-204ENST00000401884 CLIP2Q9UDT6 1046 aa20.65■□□□□ 0.9
SNED1-204ENST00000401884 PLEKHG3A1L390 1219 aa20.65■□□□□ 0.9
SNED1-204ENST00000401884 SFPQP23246 707 aaKnown RBP eCLIP20.65■□□□□ 0.9
SNED1-204ENST00000401884 PLXNC1O60486 1568 aa20.65■□□□□ 0.9
SNED1-204ENST00000401884 PPFIBP1Q86W92 1011 aa20.65■□□□□ 0.9
SNED1-204ENST00000401884 SMARCE1Q969G3 411 aa20.65■□□□□ 0.9
SNED1-204ENST00000401884 CEP89Q96ST8 783 aa20.65■□□□□ 0.9
SNED1-204ENST00000401884 ORC3Q9UBD5 711 aaPredicted RBP20.65■□□□□ 0.9
SNED1-204ENST00000401884 CPA1P15085 419 aa20.64■□□□□ 0.9
SNED1-204ENST00000401884 PDE4CQ08493 712 aa20.64■□□□□ 0.9
SNED1-204ENST00000401884 NOL7Q9UMY1 257 aaKnown RBP20.64■□□□□ 0.9
SNED1-204ENST00000401884 MINDY4BA8MYZ0 360 aa20.64■□□□□ 0.89
SNED1-204ENST00000401884 GSPT1P15170 499 aaKnown RBP20.64■□□□□ 0.89
SNED1-204ENST00000401884 MYOM2P54296 1465 aa20.64■□□□□ 0.89
SNED1-204ENST00000401884 PREX2Q70Z35 1606 aa20.64■□□□□ 0.89
SNED1-204ENST00000401884 MAP3K12Q12852 859 aa20.64■□□□□ 0.89
SNED1-204ENST00000401884 ANKRD18BA2A2Z9 1011 aa20.63■□□□□ 0.89
SNED1-204ENST00000401884 CADPS2Q86UW7 1296 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms