RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 IGHDP01880 384 aa24.5■■□□□ 1.51
AC008060.1-201ENST00000401499 LINC00116Q8NCU8 138 aa24.5■■□□□ 1.51
AC008060.1-201ENST00000401499 PLBD2Q8NHP8 589 aa24.5■■□□□ 1.51
AC008060.1-201ENST00000401499 CCDC87Q9NVE4 849 aa24.5■■□□□ 1.51
AC008060.1-201ENST00000401499 METTL22Q9BUU2 404 aaPredicted RBP24.49■■□□□ 1.51
AC008060.1-201ENST00000401499 ZNF330Q9Y3S2 320 aaPredicted RBP24.48■■□□□ 1.51
AC008060.1-201ENST00000401499 IGKV5-2P06315 115 aa24.47■■□□□ 1.51
AC008060.1-201ENST00000401499 IL6STP40189 918 aaPredicted RBP24.47■■□□□ 1.51
AC008060.1-201ENST00000401499 CWF19L2Q2TBE0 894 aaKnown RBP24.47■■□□□ 1.51
AC008060.1-201ENST00000401499 LINS1Q8NG48 757 aa24.47■■□□□ 1.51
AC008060.1-201ENST00000401499 USP44Q9H0E7 712 aa24.47■■□□□ 1.51
AC008060.1-201ENST00000401499 ALDH1L1O75891 902 aa24.46■■□□□ 1.51
AC008060.1-201ENST00000401499 TNS1Q9HBL0 1735 aaKnown RBP24.46■■□□□ 1.51
AC008060.1-201ENST00000401499 MYD88Q99836 296 aa24.46■■□□□ 1.51
AC008060.1-201ENST00000401499 ZBTB3Q9H5J0 574 aa24.46■■□□□ 1.51
AC008060.1-201ENST00000401499 CCNL1Q9UK58 526 aaPredicted RBP24.46■■□□□ 1.51
AC008060.1-201ENST00000401499 EIF5P55010 431 aaKnown RBP24.45■■□□□ 1.5
AC008060.1-201ENST00000401499 ILDR1Q86SU0 546 aaPredicted RBP24.45■■□□□ 1.5
AC008060.1-201ENST00000401499 IBTKQ9P2D0 1353 aaPredicted RBP24.44■■□□□ 1.5
AC008060.1-201ENST00000401499 CENPQQ7L2Z9 268 aaPredicted RBP24.44■■□□□ 1.5
AC008060.1-201ENST00000401499 CNTNAP4Q9C0A0 1308 aa24.44■■□□□ 1.5
AC008060.1-201ENST00000401499 ANKRD36CQ5JPF3 1778 aa24.43■■□□□ 1.5
AC008060.1-201ENST00000401499 NEURL1BA8MQ27 555 aa24.43■■□□□ 1.5
AC008060.1-201ENST00000401499 GNAI3P08754 354 aa24.43■■□□□ 1.5
AC008060.1-201ENST00000401499 NEXNQ0ZGT2 675 aa24.43■■□□□ 1.5
AC008060.1-201ENST00000401499 C4BP0C0L5 1744 aa24.43■■□□□ 1.5
AC008060.1-201ENST00000401499 NUP98P52948 1817 aa24.43■■□□□ 1.5
AC008060.1-201ENST00000401499 HDAC1Q13547 482 aaPredicted RBP24.42■■□□□ 1.5
AC008060.1-201ENST00000401499 SIRT2Q8IXJ6 389 aa24.42■■□□□ 1.5
AC008060.1-201ENST00000401499 MAP3K15Q6ZN16 1313 aa24.42■■□□□ 1.5
AC008060.1-201ENST00000401499 NBPF7P0C2Y1 421 aaPredicted RBP24.42■■□□□ 1.5
AC008060.1-201ENST00000401499 KIF6Q6ZMV9 814 aa24.42■■□□□ 1.5
AC008060.1-201ENST00000401499 RWDD1Q9H446 243 aaPredicted RBP24.41■■□□□ 1.5
AC008060.1-201ENST00000401499 LRRC4BQ9NT99 713 aa24.41■■□□□ 1.5
AC008060.1-201ENST00000401499 BCORQ6W2J9 1755 aa24.41■■□□□ 1.5
AC008060.1-201ENST00000401499 ATP5J2-PTCD1G3V325 749 aa24.4■■□□□ 1.5
AC008060.1-201ENST00000401499 GNAI2P04899 355 aa24.4■■□□□ 1.5
AC008060.1-201ENST00000401499 CEP85Q6P2H3 762 aa24.4■■□□□ 1.5
AC008060.1-201ENST00000401499 UBTFL1P0CB47 393 aaPredicted RBP24.39■■□□□ 1.5
AC008060.1-201ENST00000401499 DZIP3Q86Y13 1208 aaKnown RBP24.39■■□□□ 1.5
AC008060.1-201ENST00000401499 UTYO14607 1347 aa24.39■■□□□ 1.49
AC008060.1-201ENST00000401499 COL15A1P39059 1388 aa24.39■■□□□ 1.49
AC008060.1-201ENST00000401499 GCKRQ14397 625 aa24.38■■□□□ 1.49
AC008060.1-201ENST00000401499 RC3H1Q5TC82 1133 aaKnown RBP24.38■■□□□ 1.49
AC008060.1-201ENST00000401499 ANKRD44Q8N8A2 993 aa24.38■■□□□ 1.49
AC008060.1-201ENST00000401499 TBC1D2BQ9UPU7 963 aa24.38■■□□□ 1.49
AC008060.1-201ENST00000401499 LRRFIP2Q9Y608 721 aaKnown RBP24.38■■□□□ 1.49
AC008060.1-201ENST00000401499 GRM8O00222 908 aa24.37■■□□□ 1.49
AC008060.1-201ENST00000401499 HLFQ16534 295 aa24.37■■□□□ 1.49
AC008060.1-201ENST00000401499 ARXQ96QS3 562 aa24.37■■□□□ 1.49
AC008060.1-201ENST00000401499 GIGYF2Q6Y7W6 1299 aaKnown RBP24.37■■□□□ 1.49
AC008060.1-201ENST00000401499 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
AC008060.1-201ENST00000401499 RGPD3A6NKT7 1758 aaPredicted RBP24.36■■□□□ 1.49
AC008060.1-201ENST00000401499 TCIRG1Q13488 830 aa24.36■■□□□ 1.49
AC008060.1-201ENST00000401499 RGPD4Q7Z3J3 1758 aa24.36■■□□□ 1.49
AC008060.1-201ENST00000401499 RPAP2Q8IXW5 612 aaPredicted RBP24.36■■□□□ 1.49
AC008060.1-201ENST00000401499 ISCA1Q9BUE6 129 aa24.36■■□□□ 1.49
AC008060.1-201ENST00000401499 SCN7AQ01118 1682 aa24.35■■□□□ 1.49
AC008060.1-201ENST00000401499 NPM2Q86SE8 214 aaKnown RBP24.35■■□□□ 1.49
AC008060.1-201ENST00000401499 ERVV-1B6SEH8 477 aa24.34■■□□□ 1.49
AC008060.1-201ENST00000401499 SLC27A3Q5K4L6 730 aa24.34■■□□□ 1.49
AC008060.1-201ENST00000401499 PROM2Q8N271 834 aa24.34■■□□□ 1.49
AC008060.1-201ENST00000401499 UBR3Q6ZT12 1888 aa24.34■■□□□ 1.49
AC008060.1-201ENST00000401499 C4AP0C0L4 1744 aa24.34■■□□□ 1.49
AC008060.1-201ENST00000401499 RPS6KA4O75676 772 aa24.33■■□□□ 1.49
AC008060.1-201ENST00000401499 SMIM5Q71RC9 77 aa24.33■■□□□ 1.49
AC008060.1-201ENST00000401499 PLSCR1O15162 318 aa24.33■■□□□ 1.48
AC008060.1-201ENST00000401499 GNPATO15228 680 aa24.33■■□□□ 1.48
AC008060.1-201ENST00000401499 CAMTA2O94983 1202 aa24.33■■□□□ 1.48
AC008060.1-201ENST00000401499 APBA3O96018 575 aa24.33■■□□□ 1.48
AC008060.1-201ENST00000401499 AMIGO3Q86WK7 504 aa24.33■■□□□ 1.48
AC008060.1-201ENST00000401499 TXNRD1Q16881 649 aa24.32■■□□□ 1.48
AC008060.1-201ENST00000401499 SKAP1Q86WV1 359 aa24.32■■□□□ 1.48
AC008060.1-201ENST00000401499 SMC5Q8IY18 1101 aa24.32■■□□□ 1.48
AC008060.1-201ENST00000401499 CCDC191Q8NCU4 936 aa24.32■■□□□ 1.48
AC008060.1-201ENST00000401499 KAZALD1Q96I82 304 aa24.32■■□□□ 1.48
AC008060.1-201ENST00000401499 SUCLG2Q96I99 432 aa24.32■■□□□ 1.48
AC008060.1-201ENST00000401499 CWC25Q9NXE8 425 aaPredicted RBP24.32■■□□□ 1.48
AC008060.1-201ENST00000401499 CASP7P55210 303 aa24.31■■□□□ 1.48
AC008060.1-201ENST00000401499 TRIM28Q13263 835 aaKnown RBP24.31■■□□□ 1.48
AC008060.1-201ENST00000401499 A0A087WZG4 1122 aa24.3■■□□□ 1.48
AC008060.1-201ENST00000401499 PNMA6EA0A0J9YXQ4 647 aa24.3■■□□□ 1.48
AC008060.1-201ENST00000401499 ATP8B2P98198 1209 aa24.3■■□□□ 1.48
AC008060.1-201ENST00000401499 HSP90AB3PQ58FF7 597 aa24.3■■□□□ 1.48
AC008060.1-201ENST00000401499 JARID2Q92833 1246 aaPredicted RBP24.3■■□□□ 1.48
AC008060.1-201ENST00000401499 H7C1W4 665 aa24.29■■□□□ 1.48
AC008060.1-201ENST00000401499 UBE3BQ7Z3V4 1068 aa24.29■■□□□ 1.48
AC008060.1-201ENST00000401499 GPTP24298 496 aa24.28■■□□□ 1.48
AC008060.1-201ENST00000401499 RTCBQ9Y3I0 505 aaKnown RBP24.28■■□□□ 1.48
AC008060.1-201ENST00000401499 UBN2Q6ZU65 1347 aa24.27■■□□□ 1.48
AC008060.1-201ENST00000401499 NLRP10Q86W26 655 aa24.27■■□□□ 1.48
AC008060.1-201ENST00000401499 ZNF34Q8IZ26 560 aa24.27■■□□□ 1.48
AC008060.1-201ENST00000401499 AK7Q96M32 723 aa24.27■■□□□ 1.48
AC008060.1-201ENST00000401499 MTX1Q13505 466 aa24.26■■□□□ 1.47
AC008060.1-201ENST00000401499 EPHA10Q5JZY3 1008 aa24.26■■□□□ 1.47
AC008060.1-201ENST00000401499 PPP1R42Q7Z4L9 355 aa24.26■■□□□ 1.47
AC008060.1-201ENST00000401499 BICC1Q9H694 974 aaKnown RBP24.26■■□□□ 1.47
AC008060.1-201ENST00000401499 DCTPP1Q9H773 170 aa24.26■■□□□ 1.47
AC008060.1-201ENST00000401499 PDZRN3Q9UPQ7 1066 aa24.26■■□□□ 1.47
AC008060.1-201ENST00000401499 HMMRO75330 724 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms