RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 IL6STP40189 918 aaPredicted RBP20.56■□□□□ 0.88
TNRC18-202ENST00000399434 EIF5P55010 431 aaKnown RBP20.56■□□□□ 0.88
TNRC18-202ENST00000399434 PROM2Q8N271 834 aa20.56■□□□□ 0.88
TNRC18-202ENST00000399434 DDX19BQ9UMR2 479 aa20.56■□□□□ 0.88
TNRC18-202ENST00000399434 BEND3Q5T5X7 828 aa20.55■□□□□ 0.88
TNRC18-202ENST00000399434 DDX58O95786 925 aaKnown RBP20.54■□□□□ 0.88
TNRC18-202ENST00000399434 CCT4P50991 539 aaKnown RBP20.54■□□□□ 0.88
TNRC18-202ENST00000399434 ANKRD13DQ6ZTN6 518 aa20.54■□□□□ 0.88
TNRC18-202ENST00000399434 PLBD2Q8NHP8 589 aa20.54■□□□□ 0.88
TNRC18-202ENST00000399434 ZBTB7BO15156 539 aaPredicted RBP20.53■□□□□ 0.88
TNRC18-202ENST00000399434 PLSCR1O15162 318 aa20.53■□□□□ 0.88
TNRC18-202ENST00000399434 AMIGO3Q86WK7 504 aa20.53■□□□□ 0.88
TNRC18-202ENST00000399434 ZBTB40Q9NUA8 1239 aa20.53■□□□□ 0.88
TNRC18-202ENST00000399434 PPP4R2Q9NY27 417 aa20.53■□□□□ 0.88
TNRC18-202ENST00000399434 ZNF330Q9Y3S2 320 aaPredicted RBP20.53■□□□□ 0.88
TNRC18-202ENST00000399434 COL15A1P39059 1388 aa20.53■□□□□ 0.88
TNRC18-202ENST00000399434 APBA3O96018 575 aa20.52■□□□□ 0.88
TNRC18-202ENST00000399434 IGKV5-2P06315 115 aa20.52■□□□□ 0.88
TNRC18-202ENST00000399434 TXNRD1Q16881 649 aa20.52■□□□□ 0.88
TNRC18-202ENST00000399434 RC3H1Q5TC82 1133 aaKnown RBP20.52■□□□□ 0.88
TNRC18-202ENST00000399434 METTL22Q9BUU2 404 aaPredicted RBP20.52■□□□□ 0.88
TNRC18-202ENST00000399434 SLC27A3Q5K4L6 730 aa20.51■□□□□ 0.87
TNRC18-202ENST00000399434 RIC3Q7Z5B4 369 aa20.51■□□□□ 0.87
TNRC18-202ENST00000399434 MEIS3Q99687 375 aa20.51■□□□□ 0.87
TNRC18-202ENST00000399434 ZBTB3Q9H5J0 574 aa20.51■□□□□ 0.87
TNRC18-202ENST00000399434 SMIM5Q71RC9 77 aa20.5■□□□□ 0.87
TNRC18-202ENST00000399434 SRCIN1Q9C0H9 1055 aa20.5■□□□□ 0.87
TNRC18-202ENST00000399434 MAP3K15Q6ZN16 1313 aa20.5■□□□□ 0.87
TNRC18-202ENST00000399434 IBTKQ9P2D0 1353 aaPredicted RBP20.5■□□□□ 0.87
TNRC18-202ENST00000399434 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
TNRC18-202ENST00000399434 LINS1Q8NG48 757 aa20.49■□□□□ 0.87
TNRC18-202ENST00000399434 MYD88Q99836 296 aa20.49■□□□□ 0.87
TNRC18-202ENST00000399434 PCDHB15Q9Y5E8 787 aa20.49■□□□□ 0.87
TNRC18-202ENST00000399434 GNPATO15228 680 aa20.48■□□□□ 0.87
TNRC18-202ENST00000399434 ALDH1L1O75891 902 aa20.48■□□□□ 0.87
TNRC18-202ENST00000399434 B4GALNT3Q6L9W6 998 aa20.48■□□□□ 0.87
TNRC18-202ENST00000399434 KIF6Q6ZMV9 814 aa20.48■□□□□ 0.87
TNRC18-202ENST00000399434 TBC1D2BQ9UPU7 963 aa20.48■□□□□ 0.87
TNRC18-202ENST00000399434 NEURL1BA8MQ27 555 aa20.47■□□□□ 0.87
TNRC18-202ENST00000399434 RPS6KA4O75676 772 aa20.47■□□□□ 0.87
TNRC18-202ENST00000399434 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
TNRC18-202ENST00000399434 HLFQ16534 295 aa20.47■□□□□ 0.87
TNRC18-202ENST00000399434 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
TNRC18-202ENST00000399434 USP44Q9H0E7 712 aa20.47■□□□□ 0.87
TNRC18-202ENST00000399434 C1orf115Q9H7X2 142 aa20.47■□□□□ 0.87
TNRC18-202ENST00000399434 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
TNRC18-202ENST00000399434 AAMPQ13685 434 aa20.46■□□□□ 0.87
TNRC18-202ENST00000399434 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
TNRC18-202ENST00000399434 ISCA1Q9BUE6 129 aa20.45■□□□□ 0.86
TNRC18-202ENST00000399434 QSER1Q2KHR3 1735 aa20.45■□□□□ 0.86
TNRC18-202ENST00000399434 ERVV-1B6SEH8 477 aa20.44■□□□□ 0.86
TNRC18-202ENST00000399434 ZNF827Q17R98 1081 aa20.44■□□□□ 0.86
TNRC18-202ENST00000399434 GIGYF2Q6Y7W6 1299 aaKnown RBP20.44■□□□□ 0.86
TNRC18-202ENST00000399434 CAMKK2Q96RR4 588 aa20.44■□□□□ 0.86
TNRC18-202ENST00000399434 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
TNRC18-202ENST00000399434 UTYO14607 1347 aa20.43■□□□□ 0.86
TNRC18-202ENST00000399434 NBPF7P0C2Y1 421 aaPredicted RBP20.43■□□□□ 0.86
TNRC18-202ENST00000399434 EN1Q05925 392 aaPredicted RBP20.43■□□□□ 0.86
TNRC18-202ENST00000399434 TCIRG1Q13488 830 aa20.43■□□□□ 0.86
TNRC18-202ENST00000399434 GCKRQ14397 625 aa20.43■□□□□ 0.86
TNRC18-202ENST00000399434 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
TNRC18-202ENST00000399434 AK7Q96M32 723 aa20.43■□□□□ 0.86
TNRC18-202ENST00000399434 CCDC125Q86Z20 511 aa20.42■□□□□ 0.86
TNRC18-202ENST00000399434 AKT1S1Q96B36 256 aa20.42■□□□□ 0.86
TNRC18-202ENST00000399434 CCDC136Q96JN2 1154 aa20.42■□□□□ 0.86
TNRC18-202ENST00000399434 ARXQ96QS3 562 aa20.42■□□□□ 0.86
TNRC18-202ENST00000399434 RTCBQ9Y3I0 505 aaKnown RBP20.42■□□□□ 0.86
TNRC18-202ENST00000399434 LAMB2P55268 1798 aa20.42■□□□□ 0.86
TNRC18-202ENST00000399434 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
TNRC18-202ENST00000399434 CASZ1Q86V15 1759 aa20.41■□□□□ 0.86
TNRC18-202ENST00000399434 A0A087WZG4 1122 aa20.41■□□□□ 0.86
TNRC18-202ENST00000399434 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
TNRC18-202ENST00000399434 BCL2L12Q9HB09 334 aa20.41■□□□□ 0.86
TNRC18-202ENST00000399434 SRP68Q9UHB9 627 aaKnown RBP20.41■□□□□ 0.86
TNRC18-202ENST00000399434 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
TNRC18-202ENST00000399434 GRM8O00222 908 aa20.4■□□□□ 0.86
TNRC18-202ENST00000399434 GNAI3P08754 354 aa20.4■□□□□ 0.86
TNRC18-202ENST00000399434 CASP7P55210 303 aa20.4■□□□□ 0.86
TNRC18-202ENST00000399434 SIRT2Q8IXJ6 389 aa20.4■□□□□ 0.86
TNRC18-202ENST00000399434 ARHGEF1Q92888 912 aaKnown RBP20.4■□□□□ 0.86
TNRC18-202ENST00000399434 UPF1Q92900 1129 aaKnown RBP eCLIP20.4■□□□□ 0.86
TNRC18-202ENST00000399434 DDX60Q8IY21 1712 aaKnown RBP20.39■□□□□ 0.86
TNRC18-202ENST00000399434 IGHDP01880 384 aa20.39■□□□□ 0.85
TNRC18-202ENST00000399434 TRIM28Q13263 835 aaKnown RBP20.39■□□□□ 0.85
TNRC18-202ENST00000399434 DEFB132Q7Z7B7 95 aa20.39■□□□□ 0.85
TNRC18-202ENST00000399434 ZNF34Q8IZ26 560 aa20.39■□□□□ 0.85
TNRC18-202ENST00000399434 LRRFIP2Q9Y608 721 aaKnown RBP20.39■□□□□ 0.85
TNRC18-202ENST00000399434 PHF14O94880 888 aa20.38■□□□□ 0.85
TNRC18-202ENST00000399434 UBTFL1P0CB47 393 aaPredicted RBP20.38■□□□□ 0.85
TNRC18-202ENST00000399434 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
TNRC18-202ENST00000399434 KAZALD1Q96I82 304 aa20.38■□□□□ 0.85
TNRC18-202ENST00000399434 ANO8Q9HCE9 1232 aaPredicted RBP20.38■□□□□ 0.85
TNRC18-202ENST00000399434 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
TNRC18-202ENST00000399434 USP42Q9H9J4 1324 aaKnown RBP20.38■□□□□ 0.85
TNRC18-202ENST00000399434 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.37■□□□□ 0.85
TNRC18-202ENST00000399434 GNAI2P04899 355 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 ADRA2BP18089 450 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 GPTP24298 496 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
TNRC18-202ENST00000399434 CEP85Q6P2H3 762 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms