RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 LAMB4A4D0S4 1761 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
BRCC3-205ENST00000399026 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
BRCC3-205ENST00000399026 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-205ENST00000399026 ITPK1Q13572 414 aa11.04□□□□□ -0.64
BRCC3-205ENST00000399026 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
BRCC3-205ENST00000399026 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
BRCC3-205ENST00000399026 RTF1Q92541 710 aaKnown RBP11.04□□□□□ -0.64
BRCC3-205ENST00000399026 SLC4A9Q96Q91 983 aa11.04□□□□□ -0.64
BRCC3-205ENST00000399026 PDGFDQ9GZP0 370 aaPredicted RBP11.04□□□□□ -0.64
BRCC3-205ENST00000399026 PNNQ9H307 717 aaKnown RBP11.04□□□□□ -0.64
BRCC3-205ENST00000399026 ATP6V1AP38606 617 aa11.03□□□□□ -0.64
BRCC3-205ENST00000399026 NEUROD2Q15784 382 aa11.03□□□□□ -0.64
BRCC3-205ENST00000399026 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
BRCC3-205ENST00000399026 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
BRCC3-205ENST00000399026 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
BRCC3-205ENST00000399026 PNPLA7Q6ZV29 1317 aa11.02□□□□□ -0.65
BRCC3-205ENST00000399026 C2orf72A6NCS6 295 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 KIF3CO14782 793 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 KCNQ3O43525 872 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 TMPOP42166 694 aaKnown RBP11.01□□□□□ -0.65
BRCC3-205ENST00000399026 RIPK4P57078 832 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 AK7Q96M32 723 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 HS3ST6Q96QI5 342 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 TFCP2L1Q9NZI6 479 aa11.01□□□□□ -0.65
BRCC3-205ENST00000399026 BTBD11A6QL63 1104 aa11□□□□□ -0.65
BRCC3-205ENST00000399026 RIMBP2O15034 1052 aa11□□□□□ -0.65
BRCC3-205ENST00000399026 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
BRCC3-205ENST00000399026 PHF14O94880 888 aa11□□□□□ -0.65
BRCC3-205ENST00000399026 ZBTB7AO95365 584 aa11□□□□□ -0.65
BRCC3-205ENST00000399026 PNISRQ8TF01 805 aaKnown RBP11□□□□□ -0.65
BRCC3-205ENST00000399026 COL24A1Q17RW2 1714 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 APAF1O14727 1248 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 GNPATO15228 680 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
BRCC3-205ENST00000399026 ZNF790Q6PG37 636 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 DNAJC10Q8IXB1 793 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 FAM9BQ8IZU0 186 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 ZNF496Q96IT1 587 aaPredicted RBP10.99□□□□□ -0.65
BRCC3-205ENST00000399026 MIS18AQ9NYP9 233 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 HEG1Q9ULI3 1381 aa10.99□□□□□ -0.65
BRCC3-205ENST00000399026 SCN7AQ01118 1682 aa10.98□□□□□ -0.65
BRCC3-205ENST00000399026 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
BRCC3-205ENST00000399026 GPR153Q6NV75 609 aa10.98□□□□□ -0.65
BRCC3-205ENST00000399026 ZSWIM6Q9HCJ5 1215 aa10.98□□□□□ -0.65
BRCC3-205ENST00000399026 CNTNAP4Q9C0A0 1308 aa10.98□□□□□ -0.65
BRCC3-205ENST00000399026 SRCAPQ6ZRS2 3230 aa10.97□□□□□ -0.65
BRCC3-205ENST00000399026 PRAMEF22A3QJZ6 481 aa10.97□□□□□ -0.65
BRCC3-205ENST00000399026 CRKLP46109 303 aaKnown RBP10.97□□□□□ -0.65
BRCC3-205ENST00000399026 BCORQ6W2J9 1755 aa10.96□□□□□ -0.65
BRCC3-205ENST00000399026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
BRCC3-205ENST00000399026 TAF7Q15545 349 aaPredicted RBP10.96□□□□□ -0.65
BRCC3-205ENST00000399026 MSL1Q68DK7 614 aa10.96□□□□□ -0.65
BRCC3-205ENST00000399026 COL23A1Q86Y22 540 aaPredicted RBP10.96□□□□□ -0.65
BRCC3-205ENST00000399026 FMNL2Q96PY5 1086 aa10.96□□□□□ -0.65
BRCC3-205ENST00000399026 TSPYL4Q9UJ04 414 aa10.95□□□□□ -0.66
BRCC3-205ENST00000399026 ZBTB1Q9Y2K1 713 aa10.95□□□□□ -0.66
BRCC3-205ENST00000399026 LAS1LQ9Y4W2 734 aaKnown RBP10.95□□□□□ -0.66
BRCC3-205ENST00000399026 COL15A1P39059 1388 aa10.94□□□□□ -0.66
BRCC3-205ENST00000399026 CYP19A1P11511 503 aaPredicted RBP10.94□□□□□ -0.66
BRCC3-205ENST00000399026 SSFA2P28290 1259 aa10.94□□□□□ -0.66
BRCC3-205ENST00000399026 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
BRCC3-205ENST00000399026 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
BRCC3-205ENST00000399026 MTFR1LQ9H019 292 aa10.94□□□□□ -0.66
BRCC3-205ENST00000399026 CCDC87Q9NVE4 849 aa10.94□□□□□ -0.66
BRCC3-205ENST00000399026 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
BRCC3-205ENST00000399026 SOS1Q07889 1333 aaPredicted RBP10.93□□□□□ -0.66
BRCC3-205ENST00000399026 PIP4K2AP48426 406 aaPredicted RBP10.93□□□□□ -0.66
BRCC3-205ENST00000399026 ARSIQ5FYB1 569 aa10.93□□□□□ -0.66
BRCC3-205ENST00000399026 INTS5Q6P9B9 1019 aaKnown RBP10.93□□□□□ -0.66
BRCC3-205ENST00000399026 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
BRCC3-205ENST00000399026 RTCBQ9Y3I0 505 aaKnown RBP10.93□□□□□ -0.66
BRCC3-205ENST00000399026 CCER2I3L3R5 266 aa10.92□□□□□ -0.66
BRCC3-205ENST00000399026 RPS6KA4O75676 772 aa10.92□□□□□ -0.66
BRCC3-205ENST00000399026 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
BRCC3-205ENST00000399026 PTGER2P43116 358 aa10.92□□□□□ -0.66
BRCC3-205ENST00000399026 EIF4A1P60842 406 aaKnown RBP10.92□□□□□ -0.66
BRCC3-205ENST00000399026 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
BRCC3-205ENST00000399026 ZNF330Q9Y3S2 320 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-205ENST00000399026 SNRPA1P09661 255 aaKnown RBP10.91□□□□□ -0.66
BRCC3-205ENST00000399026 HMGB2P26583 209 aaKnown RBP10.91□□□□□ -0.66
BRCC3-205ENST00000399026 KRT24Q2M2I5 525 aa10.91□□□□□ -0.66
BRCC3-205ENST00000399026 SRP68Q9UHB9 627 aaKnown RBP10.91□□□□□ -0.66
BRCC3-205ENST00000399026 USP16Q9Y5T5 823 aa10.91□□□□□ -0.66
BRCC3-205ENST00000399026 STARD3NLO95772 234 aa10.9□□□□□ -0.66
BRCC3-205ENST00000399026 A1BGP04217 495 aa10.9□□□□□ -0.66
BRCC3-205ENST00000399026 TRAPPC3LQ5T215 181 aa10.9□□□□□ -0.66
BRCC3-205ENST00000399026 FLAD1Q8NFF5 587 aa10.9□□□□□ -0.66
BRCC3-205ENST00000399026 ARHGEF1Q92888 912 aaKnown RBP10.9□□□□□ -0.66
BRCC3-205ENST00000399026 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
BRCC3-205ENST00000399026 KRTAP3-2Q9BYR7 98 aa10.9□□□□□ -0.66
BRCC3-205ENST00000399026 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
BRCC3-205ENST00000399026 PPP1R1BQ9UD71 204 aaPredicted RBP10.9□□□□□ -0.66
BRCC3-205ENST00000399026 USP42Q9H9J4 1324 aaKnown RBP10.89□□□□□ -0.67
BRCC3-205ENST00000399026 CHL1O00533 1208 aa10.89□□□□□ -0.67
BRCC3-205ENST00000399026 GIGYF1O75420 1035 aaPredicted RBP10.89□□□□□ -0.67
BRCC3-205ENST00000399026 RFC4P35249 363 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms