RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DDX58O95786 925 aaKnown RBP30.09■■■□□ 2.41
TSPAN4-203ENST00000397397 FLAD1Q8NFF5 587 aa30.09■■■□□ 2.41
TSPAN4-203ENST00000397397 PTPRCP08575 1304 aa30.08■■■□□ 2.41
TSPAN4-203ENST00000397397 RFC4P35249 363 aa30.08■■■□□ 2.41
TSPAN4-203ENST00000397397 PNPLA7Q6ZV29 1317 aa30.07■■■□□ 2.4
TSPAN4-203ENST00000397397 IPO8O15397 1037 aaKnown RBP30.07■■■□□ 2.4
TSPAN4-203ENST00000397397 ANKRD13DQ6ZTN6 518 aa30.07■■■□□ 2.4
TSPAN4-203ENST00000397397 ZBTB3Q9H5J0 574 aa30.07■■■□□ 2.4
TSPAN4-203ENST00000397397 MAP3K15Q6ZN16 1313 aa30.07■■■□□ 2.4
TSPAN4-203ENST00000397397 MSH5O43196 834 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 ZKSCAN2Q63HK3 967 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 RIC3Q7Z5B4 369 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 COL23A1Q86Y22 540 aaPredicted RBP30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 PLBD2Q8NHP8 589 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 NARFQ9UHQ1 456 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 PI4KAP2A4QPH2 592 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 ZPR1O75312 459 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 KSR2Q6VAB6 950 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 PI4KAP1Q8N8J0 262 aa30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 SRP68Q9UHB9 627 aaKnown RBP30.05■■■□□ 2.4
TSPAN4-203ENST00000397397 CAMTA2O94983 1202 aa30.04■■■□□ 2.4
TSPAN4-203ENST00000397397 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.04■■■□□ 2.4
TSPAN4-203ENST00000397397 ARHGAP45Q92619 1136 aa30.04■■■□□ 2.4
TSPAN4-203ENST00000397397 API5Q9BZZ5 524 aaKnown RBP30.04■■■□□ 2.4
TSPAN4-203ENST00000397397 ADCY9O60503 1353 aa30.03■■■□□ 2.4
TSPAN4-203ENST00000397397 BCORQ6W2J9 1755 aa30.03■■■□□ 2.4
TSPAN4-203ENST00000397397 ERVV-1B6SEH8 477 aa30.03■■■□□ 2.4
TSPAN4-203ENST00000397397 MAP3K2Q9Y2U5 619 aa30.03■■■□□ 2.4
TSPAN4-203ENST00000397397 ARFGEF2Q9Y6D5 1785 aa30.03■■■□□ 2.4
TSPAN4-203ENST00000397397 USP42Q9H9J4 1324 aaKnown RBP30.02■■■□□ 2.4
TSPAN4-203ENST00000397397 PLIN1O60240 522 aa30.02■■■□□ 2.4
TSPAN4-203ENST00000397397 USPL1Q5W0Q7 1092 aa30.02■■■□□ 2.4
TSPAN4-203ENST00000397397 SUPT16HQ9Y5B9 1047 aaKnown RBP30.02■■■□□ 2.4
TSPAN4-203ENST00000397397 SCN7AQ01118 1682 aa30.01■■■□□ 2.4
TSPAN4-203ENST00000397397 F6X3S4 739 aa30.01■■■□□ 2.39
TSPAN4-203ENST00000397397 ATF7IPQ6VMQ6 1270 aa30.01■■■□□ 2.39
TSPAN4-203ENST00000397397 RRP1P56182 461 aaKnown RBP30■■■□□ 2.39
TSPAN4-203ENST00000397397 HLFQ16534 295 aa30■■■□□ 2.39
TSPAN4-203ENST00000397397 DNAAF4Q8WXU2 420 aa30■■■□□ 2.39
TSPAN4-203ENST00000397397 NUP98P52948 1817 aa30■■■□□ 2.39
TSPAN4-203ENST00000397397 TRIM27P14373 513 aa29.99■■■□□ 2.39
TSPAN4-203ENST00000397397 GIGYF2Q6Y7W6 1299 aaKnown RBP29.98■■■□□ 2.39
TSPAN4-203ENST00000397397 TNNQ9UQP3 1299 aa29.98■■■□□ 2.39
TSPAN4-203ENST00000397397 ZNF652Q9Y2D9 606 aa29.98■■■□□ 2.39
TSPAN4-203ENST00000397397 ZBTB7AO95365 584 aa29.97■■■□□ 2.39
TSPAN4-203ENST00000397397 SLC4A10Q6U841 1118 aa29.97■■■□□ 2.39
TSPAN4-203ENST00000397397 CLUAP1Q96AJ1 413 aa29.96■■■□□ 2.39
TSPAN4-203ENST00000397397 METTL22Q9BUU2 404 aaPredicted RBP29.96■■■□□ 2.39
TSPAN4-203ENST00000397397 BCL2L12Q9HB09 334 aa29.96■■■□□ 2.39
TSPAN4-203ENST00000397397 CLEC4GQ6UXB4 293 aa29.96■■■□□ 2.39
TSPAN4-203ENST00000397397 MYD88Q99836 296 aa29.96■■■□□ 2.39
TSPAN4-203ENST00000397397 SPON1Q9HCB6 807 aa29.96■■■□□ 2.39
TSPAN4-203ENST00000397397 RGL2O15211 777 aa29.95■■■□□ 2.38
TSPAN4-203ENST00000397397 GYS1P13807 737 aa29.95■■■□□ 2.38
TSPAN4-203ENST00000397397 HSP90AB3PQ58FF7 597 aa29.95■■■□□ 2.38
TSPAN4-203ENST00000397397 NEXNQ0ZGT2 675 aa29.94■■■□□ 2.38
TSPAN4-203ENST00000397397 TCIRG1Q13488 830 aa29.94■■■□□ 2.38
TSPAN4-203ENST00000397397 FTSJ3Q8IY81 847 aaKnown RBP29.94■■■□□ 2.38
TSPAN4-203ENST00000397397 DZIP1LQ8IYY4 767 aaKnown RBP29.94■■■□□ 2.38
TSPAN4-203ENST00000397397 ANKRD36CQ5JPF3 1778 aa29.94■■■□□ 2.38
TSPAN4-203ENST00000397397 RNF123Q5XPI4 1314 aa29.94■■■□□ 2.38
TSPAN4-203ENST00000397397 MS4A1P11836 297 aa29.93■■■□□ 2.38
TSPAN4-203ENST00000397397 ABCC4O15439 1325 aa29.93■■■□□ 2.38
TSPAN4-203ENST00000397397 FKBP8Q14318 412 aa29.92■■■□□ 2.38
TSPAN4-203ENST00000397397 ATF5Q9Y2D1 282 aaPredicted RBP29.92■■■□□ 2.38
TSPAN4-203ENST00000397397 PXDNLA1KZ92 1463 aa29.92■■■□□ 2.38
TSPAN4-203ENST00000397397 ATP5J2-PTCD1G3V325 749 aa29.91■■■□□ 2.38
TSPAN4-203ENST00000397397 GPTP24298 496 aa29.9■■■□□ 2.38
TSPAN4-203ENST00000397397 TBC1D9BQ66K14 1250 aa29.9■■■□□ 2.38
TSPAN4-203ENST00000397397 PANK1Q8TE04 598 aa29.9■■■□□ 2.38
TSPAN4-203ENST00000397397 BEND3Q5T5X7 828 aa29.89■■■□□ 2.38
TSPAN4-203ENST00000397397 BICDL1Q6ZP65 573 aa29.89■■■□□ 2.38
TSPAN4-203ENST00000397397 NIP7Q9Y221 180 aaKnown RBP eCLIP29.89■■■□□ 2.38
TSPAN4-203ENST00000397397 ATP10DQ9P241 1426 aa29.89■■■□□ 2.38
TSPAN4-203ENST00000397397 AFDNP55196 1824 aaKnown RBP29.89■■■□□ 2.38
TSPAN4-203ENST00000397397 RLBP1P12271 317 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 CCT4P50991 539 aaKnown RBP29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 ZNF34Q8IZ26 560 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 NLGN1Q8N2Q7 840 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 LINS1Q8NG48 757 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 SLC16A10Q8TF71 515 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 ISCA1Q9BUE6 129 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 SRCIN1Q9C0H9 1055 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 IGKV5-2P06315 115 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 PTGER2P43116 358 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 PDE3AQ14432 1141 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 CWF19L2Q2TBE0 894 aaKnown RBP29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 C20orf194Q5TEA3 1177 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 MSL1Q68DK7 614 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 TMEM57Q8N5G2 664 aa29.88■■■□□ 2.37
TSPAN4-203ENST00000397397 N4BP2Q86UW6 1770 aaPredicted RBP29.87■■■□□ 2.37
TSPAN4-203ENST00000397397 MTFR1LQ9H019 292 aa29.87■■■□□ 2.37
TSPAN4-203ENST00000397397 INTS3Q68E01 1043 aaKnown RBP29.86■■■□□ 2.37
TSPAN4-203ENST00000397397 SETDB2Q96T68 719 aa29.86■■■□□ 2.37
TSPAN4-203ENST00000397397 NEURL1BA8MQ27 555 aa29.85■■■□□ 2.37
TSPAN4-203ENST00000397397 NFIXQ14938 502 aa29.85■■■□□ 2.37
TSPAN4-203ENST00000397397 UBN2Q6ZU65 1347 aa29.84■■■□□ 2.37
TSPAN4-203ENST00000397397 ALDH1L1O75891 902 aa29.84■■■□□ 2.37
TSPAN4-203ENST00000397397 TRIM28Q13263 835 aaKnown RBP29.84■■■□□ 2.37
TSPAN4-203ENST00000397397 NLRP10Q86W26 655 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms