RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 MCM10Q7L590 875 aa21.67■■□□□ 1.06
CLTA-203ENST00000396603 COL11A2P13942 1736 aaPredicted RBP21.66■■□□□ 1.06
CLTA-203ENST00000396603 NPHP1O15259 732 aa21.66■■□□□ 1.06
CLTA-203ENST00000396603 SRGNP10124 158 aa21.66■■□□□ 1.06
CLTA-203ENST00000396603 TAF7Q15545 349 aaPredicted RBP21.66■■□□□ 1.06
CLTA-203ENST00000396603 DPY19L2Q6NUT2 758 aa21.66■■□□□ 1.06
CLTA-203ENST00000396603 MASTLQ96GX5 879 aa21.66■■□□□ 1.06
CLTA-203ENST00000396603 PNISRQ8TF01 805 aaKnown RBP21.65■■□□□ 1.06
CLTA-203ENST00000396603 ARFGEF2Q9Y6D5 1785 aa21.64■■□□□ 1.06
CLTA-203ENST00000396603 KLRG2A4D1S0 409 aaPredicted RBP21.64■■□□□ 1.05
CLTA-203ENST00000396603 KLRG1Q96E93 195 aa21.64■■□□□ 1.05
CLTA-203ENST00000396603 TAOK3Q9H2K8 898 aa21.64■■□□□ 1.05
CLTA-203ENST00000396603 FER1L6Q2WGJ9 1857 aa21.64■■□□□ 1.05
CLTA-203ENST00000396603 C21orf2O43822 256 aa21.63■■□□□ 1.05
CLTA-203ENST00000396603 NBPF5PQ86XG9 351 aaPredicted RBP21.63■■□□□ 1.05
CLTA-203ENST00000396603 JMYQ8N9B5 988 aa21.63■■□□□ 1.05
CLTA-203ENST00000396603 PNNQ9H307 717 aaKnown RBP21.63■■□□□ 1.05
CLTA-203ENST00000396603 PRPF40BQ6NWY9 871 aaKnown RBP21.62■■□□□ 1.05
CLTA-203ENST00000396603 TPTE2Q6XPS3 522 aa21.62■■□□□ 1.05
CLTA-203ENST00000396603 PRAMEF22A3QJZ6 481 aa21.61■■□□□ 1.05
CLTA-203ENST00000396603 ERFEQ4G0M1 354 aa21.61■■□□□ 1.05
CLTA-203ENST00000396603 LAMB4A4D0S4 1761 aa21.61■■□□□ 1.05
CLTA-203ENST00000396603 DICER1Q9UPY3 1922 aaKnown RBP21.61■■□□□ 1.05
CLTA-203ENST00000396603 NBPF26B4DH59 902 aa21.6■■□□□ 1.05
CLTA-203ENST00000396603 NPR1P16066 1061 aa21.6■■□□□ 1.05
CLTA-203ENST00000396603 DCTN1Q14203 1278 aa21.6■■□□□ 1.05
CLTA-203ENST00000396603 NBPF10Q6P3W6 841 aaKnown RBP21.6■■□□□ 1.05
CLTA-203ENST00000396603 NBPF15Q8N660 670 aa21.6■■□□□ 1.05
CLTA-203ENST00000396603 CCDC24Q8N4L8 307 aa21.59■■□□□ 1.05
CLTA-203ENST00000396603 ERVV-1B6SEH8 477 aa21.58■■□□□ 1.05
CLTA-203ENST00000396603 C7orf43Q8WVR3 580 aa21.58■■□□□ 1.05
CLTA-203ENST00000396603 PLEKHF1Q96S99 279 aa21.58■■□□□ 1.05
CLTA-203ENST00000396603 NIP7Q9Y221 180 aaKnown RBP eCLIP21.58■■□□□ 1.05
CLTA-203ENST00000396603 PIP4K2AP48426 406 aaPredicted RBP21.57■■□□□ 1.04
CLTA-203ENST00000396603 CCDC93Q567U6 631 aa21.57■■□□□ 1.04
CLTA-203ENST00000396603 KDM3BQ7LBC6 1761 aa21.56■■□□□ 1.04
CLTA-203ENST00000396603 CCDC88AQ3V6T2 1871 aa21.56■■□□□ 1.04
CLTA-203ENST00000396603 POTECB2RU33 542 aa21.56■■□□□ 1.04
CLTA-203ENST00000396603 NFE2L2Q16236 605 aa21.56■■□□□ 1.04
CLTA-203ENST00000396603 SLX4Q8IY92 1834 aa21.56■■□□□ 1.04
CLTA-203ENST00000396603 IBTKQ9P2D0 1353 aaPredicted RBP21.56■■□□□ 1.04
CLTA-203ENST00000396603 RIC1Q4ADV7 1423 aa21.55■■□□□ 1.04
CLTA-203ENST00000396603 ALDH1B1P30837 517 aa21.55■■□□□ 1.04
CLTA-203ENST00000396603 NYXQ9GZU5 481 aa21.55■■□□□ 1.04
CLTA-203ENST00000396603 ERBB4Q15303 1308 aa21.55■■□□□ 1.04
CLTA-203ENST00000396603 ZNF219Q9P2Y4 722 aaPredicted RBP21.54■■□□□ 1.04
CLTA-203ENST00000396603 IQCA1LA6NCM1 817 aa21.53■■□□□ 1.04
CLTA-203ENST00000396603 EIF4A1P60842 406 aaKnown RBP21.53■■□□□ 1.04
CLTA-203ENST00000396603 RTKN2Q8IZC4 609 aa21.53■■□□□ 1.04
CLTA-203ENST00000396603 MAPK8IP3Q9UPT6 1336 aa21.53■■□□□ 1.04
CLTA-203ENST00000396603 FKBP4Q02790 459 aaKnown RBP eCLIP21.52■■□□□ 1.04
CLTA-203ENST00000396603 CRY2Q49AN0 593 aa21.52■■□□□ 1.04
CLTA-203ENST00000396603 L3MBTL3Q96JM7 780 aaPredicted RBP21.52■■□□□ 1.04
CLTA-203ENST00000396603 MAP3K15Q6ZN16 1313 aa21.52■■□□□ 1.03
CLTA-203ENST00000396603 HTRA3P83110 453 aa21.51■■□□□ 1.03
CLTA-203ENST00000396603 HLFQ16534 295 aa21.51■■□□□ 1.03
CLTA-203ENST00000396603 BABAM1Q9NWV8 329 aa21.51■■□□□ 1.03
CLTA-203ENST00000396603 MIS18AQ9NYP9 233 aa21.51■■□□□ 1.03
CLTA-203ENST00000396603 DLG5Q8TDM6 1919 aa21.51■■□□□ 1.03
CLTA-203ENST00000396603 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
CLTA-203ENST00000396603 GRIPAP1Q4V328 841 aa21.5■■□□□ 1.03
CLTA-203ENST00000396603 CC2D2BQ6DHV5 1058 aa21.5■■□□□ 1.03
CLTA-203ENST00000396603 KIF6Q6ZMV9 814 aa21.5■■□□□ 1.03
CLTA-203ENST00000396603 RALBP1Q15311 655 aa21.49■■□□□ 1.03
CLTA-203ENST00000396603 CHADLQ6NUI6 762 aa21.49■■□□□ 1.03
CLTA-203ENST00000396603 CACNA1SQ13698 1873 aa21.48■■□□□ 1.03
CLTA-203ENST00000396603 DDNO94850 711 aaPredicted RBP21.48■■□□□ 1.03
CLTA-203ENST00000396603 PSMD1Q99460 953 aa21.47■■□□□ 1.03
CLTA-203ENST00000396603 SCN4AP35499 1836 aa21.47■■□□□ 1.03
CLTA-203ENST00000396603 SNED1Q8TER0 1413 aa21.46■■□□□ 1.03
CLTA-203ENST00000396603 HOXA10P31260 410 aaPredicted RBP21.46■■□□□ 1.03
CLTA-203ENST00000396603 LMOD3Q0VAK6 560 aa21.46■■□□□ 1.03
CLTA-203ENST00000396603 CREBZFQ9NS37 354 aa21.46■■□□□ 1.03
CLTA-203ENST00000396603 LDHDQ86WU2 507 aa21.45■■□□□ 1.02
CLTA-203ENST00000396603 PARP10Q53GL7 1025 aa21.44■■□□□ 1.02
CLTA-203ENST00000396603 GIGYF2Q6Y7W6 1299 aaKnown RBP21.44■■□□□ 1.02
CLTA-203ENST00000396603 ZNF34Q8IZ26 560 aa21.44■■□□□ 1.02
CLTA-203ENST00000396603 RRP7AQ9Y3A4 280 aaKnown RBP21.44■■□□□ 1.02
CLTA-203ENST00000396603 ABCC12Q96J65 1359 aa21.44■■□□□ 1.02
CLTA-203ENST00000396603 NUP98P52948 1817 aa21.43■■□□□ 1.02
CLTA-203ENST00000396603 FAM177BA6PVY3 158 aa21.43■■□□□ 1.02
CLTA-203ENST00000396603 FZD9O00144 591 aa21.43■■□□□ 1.02
CLTA-203ENST00000396603 IARSP41252 1262 aaKnown RBP21.43■■□□□ 1.02
CLTA-203ENST00000396603 TTLL7Q6ZT98 887 aa21.43■■□□□ 1.02
CLTA-203ENST00000396603 TAF1DQ9H5J8 278 aaPredicted RBP21.43■■□□□ 1.02
CLTA-203ENST00000396603 TSPYL4Q9UJ04 414 aa21.43■■□□□ 1.02
CLTA-203ENST00000396603 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
CLTA-203ENST00000396603 UBN2Q6ZU65 1347 aa21.42■■□□□ 1.02
CLTA-203ENST00000396603 PPP1R42Q7Z4L9 355 aa21.42■■□□□ 1.02
CLTA-203ENST00000396603 RPGRQ92834 1020 aaKnown RBP21.42■■□□□ 1.02
CLTA-203ENST00000396603 THUMPD2Q9BTF0 503 aaKnown RBP21.42■■□□□ 1.02
CLTA-203ENST00000396603 ZNF277Q9NRM2 450 aaPredicted RBP21.42■■□□□ 1.02
CLTA-203ENST00000396603 PCNTO95613 3336 aa21.42■■□□□ 1.02
CLTA-203ENST00000396603 MYL6BP14649 208 aa21.41■■□□□ 1.02
CLTA-203ENST00000396603 PNMA8AQ86V59 439 aaPredicted RBP21.41■■□□□ 1.02
CLTA-203ENST00000396603 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
CLTA-203ENST00000396603 NGEFQ8N5V2 710 aa21.41■■□□□ 1.02
CLTA-203ENST00000396603 CRAMP1Q96RY5 1269 aa21.41■■□□□ 1.02
CLTA-203ENST00000396603 PASKQ96RG2 1323 aa21.4■■□□□ 1.02
CLTA-203ENST00000396603 RIPK4P57078 832 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms