RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
TUBB-208ENST00000396389 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
TUBB-208ENST00000396389 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
TUBB-208ENST00000396389 PHF14O94880 888 aa12.65□□□□□ -0.39
TUBB-208ENST00000396389 TPM2P07951 284 aa12.65□□□□□ -0.39
TUBB-208ENST00000396389 NCLP19338 710 aaKnown RBP12.65□□□□□ -0.39
TUBB-208ENST00000396389 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.39
TUBB-208ENST00000396389 DEFB132Q7Z7B7 95 aa12.65□□□□□ -0.39
TUBB-208ENST00000396389 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
TUBB-208ENST00000396389 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
TUBB-208ENST00000396389 SNRPA1P09661 255 aaKnown RBP12.64□□□□□ -0.39
TUBB-208ENST00000396389 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
TUBB-208ENST00000396389 SIK1P57059 783 aa12.64□□□□□ -0.39
TUBB-208ENST00000396389 FAM196AQ6ZSG2 479 aa12.64□□□□□ -0.39
TUBB-208ENST00000396389 LNPKQ9C0E8 428 aa12.64□□□□□ -0.39
TUBB-208ENST00000396389 ITPK1Q13572 414 aa12.64□□□□□ -0.39
TUBB-208ENST00000396389 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
TUBB-208ENST00000396389 BCL9O00512 1426 aa12.64□□□□□ -0.39
TUBB-208ENST00000396389 DDIT3P35638 169 aa12.63□□□□□ -0.39
TUBB-208ENST00000396389 ITPRIPQ8IWB1 547 aa12.63□□□□□ -0.39
TUBB-208ENST00000396389 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
TUBB-208ENST00000396389 PRDM10Q9NQV6 1147 aa12.63□□□□□ -0.39
TUBB-208ENST00000396389 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
TUBB-208ENST00000396389 CCNL1Q9UK58 526 aaPredicted RBP12.62□□□□□ -0.39
TUBB-208ENST00000396389 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
TUBB-208ENST00000396389 TRIM27P14373 513 aa12.62□□□□□ -0.39
TUBB-208ENST00000396389 CCDC30Q5VVM6 783 aa12.62□□□□□ -0.39
TUBB-208ENST00000396389 JARID2Q92833 1246 aaPredicted RBP12.62□□□□□ -0.39
TUBB-208ENST00000396389 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
TUBB-208ENST00000396389 PRDM4Q9UKN5 801 aa12.62□□□□□ -0.39
TUBB-208ENST00000396389 ZBTB1Q9Y2K1 713 aa12.62□□□□□ -0.39
TUBB-208ENST00000396389 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
TUBB-208ENST00000396389 DZIP1LQ8IYY4 767 aaKnown RBP12.61□□□□□ -0.39
TUBB-208ENST00000396389 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 TBC1D2BQ9UPU7 963 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
TUBB-208ENST00000396389 FAM177BA6PVY3 158 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
TUBB-208ENST00000396389 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 TOGARAM1Q9Y4F4 1720 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 MSNP26038 577 aaKnown RBP12.61□□□□□ -0.39
TUBB-208ENST00000396389 RAB3GAP1Q15042 981 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 NBPF10Q6P3W6 841 aaKnown RBP12.61□□□□□ -0.39
TUBB-208ENST00000396389 COPS6Q7L5N1 327 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 AMIGO3Q86WK7 504 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 NBPF15Q8N660 670 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 GBP4Q96PP9 640 aa12.61□□□□□ -0.39
TUBB-208ENST00000396389 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
TUBB-208ENST00000396389 FLIIQ13045 1269 aa12.6□□□□□ -0.39
TUBB-208ENST00000396389 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
TUBB-208ENST00000396389 OFD1O75665 1012 aa12.6□□□□□ -0.39
TUBB-208ENST00000396389 TTLL7Q6ZT98 887 aa12.6□□□□□ -0.39
TUBB-208ENST00000396389 PI4KAP2A4QPH2 592 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 PI4KAP1Q8N8J0 262 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 LINC00116Q8NCU8 138 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 KIF2CQ99661 725 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 C1orf115Q9H7X2 142 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 DOT1LQ8TEK3 1739 aa12.59□□□□□ -0.39
TUBB-208ENST00000396389 CRKLP46109 303 aaKnown RBP12.58□□□□□ -0.39
TUBB-208ENST00000396389 CCDC173Q0VFZ6 552 aa12.58□□□□□ -0.39
TUBB-208ENST00000396389 SMC5Q8IY18 1101 aa12.58□□□□□ -0.39
TUBB-208ENST00000396389 MPNDQ8N594 471 aa12.58□□□□□ -0.39
TUBB-208ENST00000396389 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.39
TUBB-208ENST00000396389 STARD3NLO95772 234 aa12.58□□□□□ -0.4
TUBB-208ENST00000396389 PDIA6Q15084 440 aa12.58□□□□□ -0.4
TUBB-208ENST00000396389 EZH2Q15910 746 aaKnown RBP12.58□□□□□ -0.4
TUBB-208ENST00000396389 CAVIN1Q6NZI2 390 aaKnown RBP12.58□□□□□ -0.4
TUBB-208ENST00000396389 TMEM57Q8N5G2 664 aa12.58□□□□□ -0.4
TUBB-208ENST00000396389 GNPATO15228 680 aa12.58□□□□□ -0.4
TUBB-208ENST00000396389 ATF7IPQ6VMQ6 1270 aa12.58□□□□□ -0.4
TUBB-208ENST00000396389 MCTP1Q6DN14 999 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 BICDL1Q6ZP65 573 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 PROM2Q8N271 834 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 ZHX1Q9UKY1 873 aaPredicted RBP12.57□□□□□ -0.4
TUBB-208ENST00000396389 THSD7AQ9UPZ6 1657 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 CYP19A1P11511 503 aaPredicted RBP12.57□□□□□ -0.4
TUBB-208ENST00000396389 PKP1Q13835 747 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 CWF19L2Q2TBE0 894 aaKnown RBP12.57□□□□□ -0.4
TUBB-208ENST00000396389 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 PPP1R9BQ96SB3 815 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
TUBB-208ENST00000396389 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.57□□□□□ -0.4
TUBB-208ENST00000396389 SCN11AQ9UI33 1791 aa12.57□□□□□ -0.4
TUBB-208ENST00000396389 GPTP24298 496 aa12.56□□□□□ -0.4
TUBB-208ENST00000396389 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
TUBB-208ENST00000396389 ILDR2Q71H61 639 aa12.56□□□□□ -0.4
TUBB-208ENST00000396389 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
TUBB-208ENST00000396389 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
TUBB-208ENST00000396389 MAP3K2Q9Y2U5 619 aa12.56□□□□□ -0.4
TUBB-208ENST00000396389 UQCRHLA0A096LP55 91 aa12.56□□□□□ -0.4
TUBB-208ENST00000396389 UQCRHP07919 91 aa12.56□□□□□ -0.4
TUBB-208ENST00000396389 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
TUBB-208ENST00000396389 ISY1Q9ULR0 285 aaKnown RBP12.56□□□□□ -0.4
TUBB-208ENST00000396389 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms