RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 TRIM5Q9C035 493 aa16.52■□□□□ 0.23
PBRM1-204ENST00000394830 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
PBRM1-204ENST00000394830 ZNF396Q96N95 335 aaPredicted RBP16.51■□□□□ 0.23
PBRM1-204ENST00000394830 SSH2Q76I76 1423 aa16.51■□□□□ 0.23
PBRM1-204ENST00000394830 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
PBRM1-204ENST00000394830 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
PBRM1-204ENST00000394830 SGSM2O43147 1006 aa16.51■□□□□ 0.23
PBRM1-204ENST00000394830 CFAP45Q9UL16 551 aa16.51■□□□□ 0.23
PBRM1-204ENST00000394830 COL3A1P02461 1466 aaPredicted RBP16.5■□□□□ 0.23
PBRM1-204ENST00000394830 KINO60870 393 aaKnown RBP16.5■□□□□ 0.23
PBRM1-204ENST00000394830 AK2P54819 239 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 MPNDQ8N594 471 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 APPP05067 770 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 HMG20BQ9P0W2 317 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 RNMTO43148 476 aaKnown RBP16.5■□□□□ 0.23
PBRM1-204ENST00000394830 SYNE3Q6ZMZ3 975 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 STAP2Q9UGK3 403 aa16.5■□□□□ 0.23
PBRM1-204ENST00000394830 GCP02774 474 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 RBM8AQ9Y5S9 174 aaKnown RBP16.49■□□□□ 0.23
PBRM1-204ENST00000394830 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
PBRM1-204ENST00000394830 FMNL2Q96PY5 1086 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 PA2G4Q9UQ80 394 aaKnown RBP16.49■□□□□ 0.23
PBRM1-204ENST00000394830 RAD50Q92878 1312 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 NLRP1Q9C000 1473 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 IFNL2Q8IZJ0 200 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 SDF4Q9BRK5 362 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
PBRM1-204ENST00000394830 DHX16O60231 1041 aaKnown RBP16.49■□□□□ 0.23
PBRM1-204ENST00000394830 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 USP25Q9UHP3 1055 aa16.49■□□□□ 0.23
PBRM1-204ENST00000394830 ARHGEF28Q8N1W1 1705 aaKnown RBP16.48■□□□□ 0.23
PBRM1-204ENST00000394830 ADGRB2O60241 1585 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 GAS2L3Q86XJ1 694 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 CEP126Q9P2H0 1117 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 BRD1O95696 1058 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 F13A1P00488 732 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
PBRM1-204ENST00000394830 HSPA4P34932 840 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 TRIM29Q14134 588 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 NAT10Q9H0A0 1025 aaKnown RBP16.48■□□□□ 0.23
PBRM1-204ENST00000394830 A0A087WZG4 1122 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 SPC24Q8NBT2 197 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 RBSNQ9H1K0 784 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 CNPY2Q9Y2B0 182 aa16.48■□□□□ 0.23
PBRM1-204ENST00000394830 UQCRHLA0A096LP55 91 aa16.47■□□□□ 0.23
PBRM1-204ENST00000394830 UQCRHP07919 91 aa16.47■□□□□ 0.23
PBRM1-204ENST00000394830 CWF19L2Q2TBE0 894 aaKnown RBP16.47■□□□□ 0.23
PBRM1-204ENST00000394830 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
PBRM1-204ENST00000394830 SNRPA1P09661 255 aaKnown RBP16.47■□□□□ 0.23
PBRM1-204ENST00000394830 VPS53Q5VIR6 699 aa16.47■□□□□ 0.23
PBRM1-204ENST00000394830 NBPF6Q5VWK0 638 aa16.47■□□□□ 0.23
PBRM1-204ENST00000394830 NBPF4Q96M43 638 aa16.47■□□□□ 0.23
PBRM1-204ENST00000394830 DDX21Q9NR30 783 aaKnown RBP eCLIP16.47■□□□□ 0.23
PBRM1-204ENST00000394830 CEBPZQ03701 1054 aaKnown RBP16.46■□□□□ 0.23
PBRM1-204ENST00000394830 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 XAGE3Q8WTP9 111 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 ZKSCAN5Q9Y2L8 839 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 HMGB1P09429 215 aaKnown RBP16.46■□□□□ 0.23
PBRM1-204ENST00000394830 KIF2CQ99661 725 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 CTNNA3Q9UI47 895 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 SNX14Q9Y5W7 946 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 CD163L1Q9NR16 1453 aa16.46■□□□□ 0.23
PBRM1-204ENST00000394830 PKP1Q13835 747 aa16.46■□□□□ 0.22
PBRM1-204ENST00000394830 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.22
PBRM1-204ENST00000394830 COPS6Q7L5N1 327 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 UBE3BQ7Z3V4 1068 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.45■□□□□ 0.22
PBRM1-204ENST00000394830 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 SYT1P21579 422 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
PBRM1-204ENST00000394830 KIF6Q6ZMV9 814 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
PBRM1-204ENST00000394830 HCLS1P14317 486 aaPredicted RBP16.44■□□□□ 0.22
PBRM1-204ENST00000394830 NMIQ13287 307 aaPredicted RBP16.44■□□□□ 0.22
PBRM1-204ENST00000394830 DDX19AQ9NUU7 478 aaKnown RBP16.44■□□□□ 0.22
PBRM1-204ENST00000394830 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 PREX1Q8TCU6 1659 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 CCDC171Q6TFL3 1326 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 AGLP35573 1532 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 NPHP1O15259 732 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 ADCY5O95622 1261 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 SLC39A6Q13433 755 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 NEK1Q96PY6 1258 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
PBRM1-204ENST00000394830 STK38Q15208 465 aa16.43■□□□□ 0.22
PBRM1-204ENST00000394830 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
PBRM1-204ENST00000394830 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
PBRM1-204ENST00000394830 ME1P48163 572 aa16.43■□□□□ 0.22
PBRM1-204ENST00000394830 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
PBRM1-204ENST00000394830 CAMK4Q16566 473 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms