RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 CLEC4GQ6UXB4 293 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 TRMT2AQ8IZ69 625 aaKnown RBP8.72□□□□□ -1.01
UBBP1-201ENST00000392399 NBPF15Q8N660 670 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 HYPKQ9NX55 129 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 USP42Q9H9J4 1324 aaKnown RBP8.72□□□□□ -1.01
UBBP1-201ENST00000392399 ERVV-1B6SEH8 477 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 EXOSC9Q06265 439 aaKnown RBP8.71□□□□□ -1.02
UBBP1-201ENST00000392399 PDIA6Q15084 440 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 USPL1Q5W0Q7 1092 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 SMIM5Q71RC9 77 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 DZIP3Q86Y13 1208 aaKnown RBP8.71□□□□□ -1.02
UBBP1-201ENST00000392399 TSPYL6Q8N831 410 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 ZNF428Q96B54 188 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 SGIP1Q9BQI5 828 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 ZNF652Q9Y2D9 606 aa8.71□□□□□ -1.02
UBBP1-201ENST00000392399 ZNF330Q9Y3S2 320 aaPredicted RBP8.71□□□□□ -1.02
UBBP1-201ENST00000392399 VAMP4O75379 141 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 CT47B1P0C2W7 299 aaPredicted RBP8.7□□□□□ -1.02
UBBP1-201ENST00000392399 MYL6BP14649 208 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 PTGER2P43116 358 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 KIF6Q6ZMV9 814 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 LRP10Q7Z4F1 713 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 ARXQ96QS3 562 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 STK31Q9BXU1 1019 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 TBC1D2BQ9UPU7 963 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 ZBED9Q6R2W3 1325 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 CASZ1Q86V15 1759 aa8.7□□□□□ -1.02
UBBP1-201ENST00000392399 CAMTA2O94983 1202 aa8.69□□□□□ -1.02
UBBP1-201ENST00000392399 TM4SF1P30408 202 aa8.69□□□□□ -1.02
UBBP1-201ENST00000392399 PIP4K2AP48426 406 aaPredicted RBP8.69□□□□□ -1.02
UBBP1-201ENST00000392399 COPS6Q7L5N1 327 aa8.69□□□□□ -1.02
UBBP1-201ENST00000392399 NECTIN2Q92692 538 aa8.69□□□□□ -1.02
UBBP1-201ENST00000392399 CDCA7LQ96GN5 454 aa8.69□□□□□ -1.02
UBBP1-201ENST00000392399 CHPF2Q9P2E5 772 aa8.69□□□□□ -1.02
UBBP1-201ENST00000392399 PPP1R1BQ9UD71 204 aaPredicted RBP8.69□□□□□ -1.02
UBBP1-201ENST00000392399 SRP68Q9UHB9 627 aaKnown RBP8.69□□□□□ -1.02
UBBP1-201ENST00000392399 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 TUBGCP6Q96RT7 1819 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 MMP10P09238 476 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 FKBP8Q14318 412 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 PROSER3Q2NL68 480 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 HSP90AB3PQ58FF7 597 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 MSL1Q68DK7 614 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 ANKRD13DQ6ZTN6 518 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 SETDB2Q96T68 719 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 BCL2L12Q9HB09 334 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 MAP3K15Q6ZN16 1313 aa8.68□□□□□ -1.02
UBBP1-201ENST00000392399 DDX58O95786 925 aaKnown RBP8.67□□□□□ -1.02
UBBP1-201ENST00000392399 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
UBBP1-201ENST00000392399 TTLL7Q6ZT98 887 aa8.67□□□□□ -1.02
UBBP1-201ENST00000392399 PLBD2Q8NHP8 589 aa8.67□□□□□ -1.02
UBBP1-201ENST00000392399 SP7Q8TDD2 431 aaPredicted RBP8.67□□□□□ -1.02
UBBP1-201ENST00000392399 XAGE3Q8WTP9 111 aa8.67□□□□□ -1.02
UBBP1-201ENST00000392399 HAX1O00165 279 aa8.66□□□□□ -1.02
UBBP1-201ENST00000392399 ANXA1P04083 346 aa8.66□□□□□ -1.02
UBBP1-201ENST00000392399 PRKAR2AP13861 404 aaKnown RBP8.66□□□□□ -1.02
UBBP1-201ENST00000392399 AIMP1Q12904 312 aaKnown RBP8.66□□□□□ -1.02
UBBP1-201ENST00000392399 NFIXQ14938 502 aa8.66□□□□□ -1.02
UBBP1-201ENST00000392399 ALDH1L2Q3SY69 923 aa8.66□□□□□ -1.02
UBBP1-201ENST00000392399 TBC1D9BQ66K14 1250 aa8.66□□□□□ -1.02
UBBP1-201ENST00000392399 CD2APQ9Y5K6 639 aa8.66□□□□□ -1.02
UBBP1-201ENST00000392399 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
UBBP1-201ENST00000392399 LRP5O75197 1615 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 CARMIL3Q8ND23 1372 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 POLRMTO00411 1230 aaKnown RBP8.65□□□□□ -1.02
UBBP1-201ENST00000392399 SERPINB2P05120 415 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 TRIM28Q13263 835 aaKnown RBP8.65□□□□□ -1.02
UBBP1-201ENST00000392399 TCIRG1Q13488 830 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 HLFQ16534 295 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 PARP10Q53GL7 1025 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 TPTE2Q6XPS3 522 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 ZNF34Q8IZ26 560 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 ZBTB3Q9H5J0 574 aa8.65□□□□□ -1.02
UBBP1-201ENST00000392399 PHAXQ9H814 394 aaKnown RBP8.65□□□□□ -1.02
UBBP1-201ENST00000392399 NIP7Q9Y221 180 aaKnown RBP eCLIP8.65□□□□□ -1.02
UBBP1-201ENST00000392399 ATP10DQ9P241 1426 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 C4AP0C0L4 1744 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 BRPF1P55201 1214 aaPredicted RBP8.64□□□□□ -1.03
UBBP1-201ENST00000392399 TGFB2P61812 414 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 DDR1Q08345 913 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 FLIIQ13045 1269 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 KSR2Q6VAB6 950 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 BICDL1Q6ZP65 573 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 NYXQ9GZU5 481 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
UBBP1-201ENST00000392399 RNF123Q5XPI4 1314 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 CACNA1FO60840 1977 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 PI4KAP2A4QPH2 592 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 TCERG1O14776 1098 aaKnown RBP8.63□□□□□ -1.03
UBBP1-201ENST00000392399 PRR29P0C7W0 189 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 NEXNQ0ZGT2 675 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
UBBP1-201ENST00000392399 PPP1R42Q7Z4L9 355 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 NBPF5PQ86XG9 351 aaPredicted RBP8.63□□□□□ -1.03
UBBP1-201ENST00000392399 PI4KAP1Q8N8J0 262 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 SYT17Q9BSW7 474 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 BRIP1Q9BX63 1249 aa8.63□□□□□ -1.03
UBBP1-201ENST00000392399 FHDC1Q9C0D6 1143 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms