RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 SLKQ9H2G2 1235 aaPredicted RBP6.62□□□□□ -1.35
GEN1-202ENST00000381254 ATP7BP35670 1465 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 SSH2Q76I76 1423 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 PPIP5K2O43314 1243 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 CCT4P50991 539 aaKnown RBP6.62□□□□□ -1.35
GEN1-202ENST00000381254 SYNE3Q6ZMZ3 975 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 KLRG1Q96E93 195 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 DLC1Q96QB1 1528 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 CCDC173Q0VFZ6 552 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 JMYQ8N9B5 988 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 NLRP3Q96P20 1036 aa6.62□□□□□ -1.35
GEN1-202ENST00000381254 IP6K1Q92551 441 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 HTATIP2Q9BUP3 242 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 UBXN2AP68543 259 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 GORABQ5T7V8 394 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 CCDC102AQ96A19 550 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 ATP10DQ9P241 1426 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 EPB41L2O43491 1005 aaKnown RBP6.61□□□□□ -1.35
GEN1-202ENST00000381254 LDHDQ86WU2 507 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 LBHD1Q9BQE6 289 aaPredicted RBP6.61□□□□□ -1.35
GEN1-202ENST00000381254 ROBO2Q9HCK4 1378 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 BECN2A8MW95 431 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 CCDC174Q6PII3 467 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 C22orf23Q9BZE7 217 aa6.61□□□□□ -1.35
GEN1-202ENST00000381254 KRT32Q14532 448 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 HSP90AA2PQ14568 343 aaPredicted RBP6.6□□□□□ -1.35
GEN1-202ENST00000381254 FMNL2Q96PY5 1086 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 ARHGAP45Q92619 1136 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 BACH2Q9BYV9 841 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 TAF3Q5VWG9 929 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 ZNF142P52746 1687 aaPredicted RBP6.6□□□□□ -1.35
GEN1-202ENST00000381254 MYCNP04198 464 aaPredicted RBP6.6□□□□□ -1.35
GEN1-202ENST00000381254 DCAF5Q96JK2 942 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 LOC102724428A0A0B4J2F2 783 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 SIK1P57059 783 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 SF3A1Q15459 793 aaKnown RBP6.6□□□□□ -1.35
GEN1-202ENST00000381254 PCDH10Q9P2E7 1040 aa6.6□□□□□ -1.35
GEN1-202ENST00000381254 RRP7AQ9Y3A4 280 aaKnown RBP6.6□□□□□ -1.35
GEN1-202ENST00000381254 ZNF157P51786 506 aaPredicted RBP6.59□□□□□ -1.35
GEN1-202ENST00000381254 CCDC73Q6ZRK6 1079 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
GEN1-202ENST00000381254 GGNBP2Q9H3C7 697 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 A0A0G2JLW4 131 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 APAF1O14727 1248 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 GTPBP4Q9BZE4 634 aaKnown RBP6.59□□□□□ -1.35
GEN1-202ENST00000381254 ARHGAP23Q9P227 1491 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 RFX1P22670 979 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 PPP2R1AP30153 589 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 SETQ01105 290 aaPredicted RBP6.59□□□□□ -1.35
GEN1-202ENST00000381254 USHBP1Q8N6Y0 703 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 INO80Q9ULG1 1556 aaPredicted RBP6.59□□□□□ -1.35
GEN1-202ENST00000381254 KIDINS220Q9ULH0 1771 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 CCDC66A2RUB6 948 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 TUBB4BP68371 445 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 PALLDQ8WX93 1383 aa6.59□□□□□ -1.35
GEN1-202ENST00000381254 PPP1R12BO60237 982 aaPredicted RBP6.59□□□□□ -1.36
GEN1-202ENST00000381254 NEMFO60524 1076 aa6.59□□□□□ -1.36
GEN1-202ENST00000381254 XBP1P17861 261 aa6.59□□□□□ -1.36
GEN1-202ENST00000381254 DPP8Q6V1X1 898 aaPredicted RBP6.59□□□□□ -1.36
GEN1-202ENST00000381254 WDR33Q9C0J8 1336 aaKnown RBP6.59□□□□□ -1.36
GEN1-202ENST00000381254 TRIM29Q14134 588 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 SAFBQ15424 915 aaKnown RBP eCLIP6.58□□□□□ -1.36
GEN1-202ENST00000381254 CCDC27Q2M243 656 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 CCDC30Q5VVM6 783 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 EXOC6Q8TAG9 804 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 MBD5Q9P267 1494 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 KAT6BQ8WYB5 2073 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 APBB1O00213 710 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 IGHMBP2P38935 993 aaKnown RBP6.58□□□□□ -1.36
GEN1-202ENST00000381254 GPR101Q96P66 508 aaPredicted RBP6.58□□□□□ -1.36
GEN1-202ENST00000381254 MAP3K5Q99683 1374 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 CELF2O95319 508 aaKnown RBP6.58□□□□□ -1.36
GEN1-202ENST00000381254 ALDH1A1P00352 501 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 AKAP17AQ02040 695 aaKnown RBP6.58□□□□□ -1.36
GEN1-202ENST00000381254 TRDNQ13061 729 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 NOM1Q5C9Z4 860 aaKnown RBP6.58□□□□□ -1.36
GEN1-202ENST00000381254 PIK3C2BO00750 1634 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 PLEKHG3A1L390 1219 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 SERPINB2P05120 415 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 DPEP1P16444 411 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 G3BP1Q13283 466 aaKnown RBP eCLIP6.58□□□□□ -1.36
GEN1-202ENST00000381254 DACH1Q9UI36 760 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 MASTLQ96GX5 879 aa6.58□□□□□ -1.36
GEN1-202ENST00000381254 EIF2S2P20042 333 aaKnown RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 PLCB2Q00722 1185 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 ZNF396Q96N95 335 aaPredicted RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 LUC7LQ9NQ29 371 aaKnown RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 CWC15Q9P013 229 aaKnown RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 NIP7Q9Y221 180 aaKnown RBP eCLIP6.57□□□□□ -1.36
GEN1-202ENST00000381254 CSADQ9Y600 493 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 CLASRPQ8N2M8 674 aaKnown RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 GNL3LQ9NVN8 582 aaKnown RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 TSPYL1Q9H0U9 437 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 MYO6Q9UM54 1294 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 TRIM6-TRIM34B2RNG4 842 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 H3BQV1 296 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 RIPK4P57078 832 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 PKN2Q16513 984 aaKnown RBP6.57□□□□□ -1.36
GEN1-202ENST00000381254 RIC3Q7Z5B4 369 aa6.57□□□□□ -1.36
GEN1-202ENST00000381254 SMC3Q9UQE7 1217 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms