RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 TTC12Q9H892 705 aaPredicted RBP9.1□□□□□ -0.95
GPCPD1-201ENST00000379019 BMP2KLQ5H9B9 411 aa9.1□□□□□ -0.95
GPCPD1-201ENST00000379019 RAPGEF4Q8WZA2 1011 aa9.1□□□□□ -0.95
GPCPD1-201ENST00000379019 NBPF14Q5TI25 921 aa9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 OFD1O75665 1012 aa9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 HSP90AA1P07900 732 aaKnown RBP9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 KCNF1Q9H3M0 494 aa9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 SLC27A3Q5K4L6 730 aa9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 CFAP53Q96M91 514 aa9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 MCM10Q7L590 875 aa9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
GPCPD1-201ENST00000379019 RRP9O43818 475 aaKnown RBP9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 BECN1Q14457 450 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 NKX1-1Q15270 411 aaPredicted RBP9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 UPF3BQ9BZI7 483 aaKnown RBP9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 ABCC4O15439 1325 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 CLEC17AQ6ZS10 378 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 SMARCC1Q92922 1105 aaPredicted RBP9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 IGSF1Q8N6C5 1336 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 A0A0G2JS52 829 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 ZNF853P0CG23 659 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 SHANK3Q9BYB0 1731 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 PNMA6EA0A0J9YXQ4 647 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 KDRP35968 1356 aa9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 DDX49Q9Y6V7 483 aaKnown RBP9.08□□□□□ -0.96
GPCPD1-201ENST00000379019 A0A0U1RQG5 324 aaPredicted RBP9.07□□□□□ -0.96
GPCPD1-201ENST00000379019 FAM173BQ6P4H8 233 aa9.07□□□□□ -0.96
GPCPD1-201ENST00000379019 ZCRB1Q8TBF4 217 aaKnown RBP9.07□□□□□ -0.96
GPCPD1-201ENST00000379019 MAP4K4O95819 1239 aaPredicted RBP9.07□□□□□ -0.96
GPCPD1-201ENST00000379019 AXIN2Q9Y2T1 843 aa9.07□□□□□ -0.96
GPCPD1-201ENST00000379019 USP16Q9Y5T5 823 aa9.07□□□□□ -0.96
GPCPD1-201ENST00000379019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.06□□□□□ -0.96
GPCPD1-201ENST00000379019 SALL3Q9BXA9 1300 aa9.06□□□□□ -0.96
GPCPD1-201ENST00000379019 KLHL40Q2TBA0 621 aa9.06□□□□□ -0.96
GPCPD1-201ENST00000379019 L1TD1Q5T7N2 865 aaKnown RBP9.06□□□□□ -0.96
GPCPD1-201ENST00000379019 PLEKHO1Q53GL0 409 aaPredicted RBP9.06□□□□□ -0.96
GPCPD1-201ENST00000379019 RPAP1Q9BWH6 1393 aaPredicted RBP9.06□□□□□ -0.96
GPCPD1-201ENST00000379019 EXOC6BQ9Y2D4 811 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 ZBTB9Q96C00 473 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 ADAMTS7Q9UKP4 1686 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 PAPPAQ13219 1627 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 UQCRHLA0A096LP55 91 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 SPDYE4A6NLX3 237 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 UQCRHP07919 91 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 ZSCAN30Q86W11 494 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 HSCBQ8IWL3 235 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 RASEFQ8IZ41 740 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 NOL7Q9UMY1 257 aaKnown RBP9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 LY75O60449 1722 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 ZNF445P59923 1031 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 CAMKK2Q96RR4 588 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 PYCARDQ9ULZ3 195 aa9.05□□□□□ -0.96
GPCPD1-201ENST00000379019 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 NCLP19338 710 aaKnown RBP9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 MAP3K5Q99683 1374 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 MRC1P22897 1456 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 IL13P35225 146 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 CEP85Q6P2H3 762 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 DDX19BQ9UMR2 479 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 TTC22Q5TAA0 569 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 ERVV-2B6SEH9 535 aa9.04□□□□□ -0.96
GPCPD1-201ENST00000379019 COL24A1Q17RW2 1714 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 CDH23Q9H251 3354 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 MEGF6O75095 1541 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 LRRN4CLQ8ND94 238 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 C5P01031 1676 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 ARID5BQ14865 1188 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 IFNL2Q8IZJ0 200 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 HTATSF1O43719 755 aaKnown RBP9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
GPCPD1-201ENST00000379019 MARCH10Q8NA82 808 aaPredicted RBP9.02□□□□□ -0.96
GPCPD1-201ENST00000379019 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.96
GPCPD1-201ENST00000379019 KIF16BQ96L93 1317 aa9.02□□□□□ -0.97
GPCPD1-201ENST00000379019 SYTL4Q96C24 671 aaPredicted RBP9.02□□□□□ -0.97
GPCPD1-201ENST00000379019 TMX3Q96JJ7 454 aa9.02□□□□□ -0.97
GPCPD1-201ENST00000379019 BTAF1O14981 1849 aa9.02□□□□□ -0.97
GPCPD1-201ENST00000379019 IFIT2P09913 472 aaKnown RBP9.02□□□□□ -0.97
GPCPD1-201ENST00000379019 DCTPP1Q9H773 170 aa9.02□□□□□ -0.97
GPCPD1-201ENST00000379019 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 APBA3O96018 575 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 USP25Q9UHP3 1055 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 ADCK5Q3MIX3 580 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 NCBP3Q53F19 620 aaKnown RBP9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 FANCGO15287 622 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 ZNF500O60304 480 aaPredicted RBP9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 CBX1P83916 185 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 LRMPQ12912 555 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 EIF4A2Q14240 407 aaKnown RBP9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 DCAF5Q96JK2 942 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 CASZ1Q86V15 1759 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 SOX12O15370 315 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 PDCL3Q9H2J4 239 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 STK32BQ9NY57 414 aa9.01□□□□□ -0.97
GPCPD1-201ENST00000379019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms