RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 NAP1L5Q96NT1 182 aaPredicted RBP13.22□□□□□ -0.29
BEST1-201ENST00000378043 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.29
BEST1-201ENST00000378043 AK2P54819 239 aa13.21□□□□□ -0.29
BEST1-201ENST00000378043 FOXD4L6Q3SYB3 417 aaPredicted RBP13.21□□□□□ -0.29
BEST1-201ENST00000378043 FOXD4L3Q6VB84 417 aaPredicted RBP13.21□□□□□ -0.29
BEST1-201ENST00000378043 RUFY3Q7L099 469 aa13.21□□□□□ -0.29
BEST1-201ENST00000378043 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
BEST1-201ENST00000378043 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.29
BEST1-201ENST00000378043 C9orf78Q9NZ63 289 aaPredicted RBP13.21□□□□□ -0.29
BEST1-201ENST00000378043 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.29
BEST1-201ENST00000378043 ZSCAN30Q86W11 494 aa13.21□□□□□ -0.29
BEST1-201ENST00000378043 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
BEST1-201ENST00000378043 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.3
BEST1-201ENST00000378043 GADD45BO75293 160 aaPredicted RBP13.2□□□□□ -0.3
BEST1-201ENST00000378043 CPA1P15085 419 aa13.2□□□□□ -0.3
BEST1-201ENST00000378043 PTH1RQ03431 593 aa13.2□□□□□ -0.3
BEST1-201ENST00000378043 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
BEST1-201ENST00000378043 PDIA6Q15084 440 aa13.2□□□□□ -0.3
BEST1-201ENST00000378043 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
BEST1-201ENST00000378043 SASH1O94885 1247 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 SUCLG2Q96I99 432 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 UTYO14607 1347 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 GRM8O00222 908 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 LARGE1O95461 756 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 LMOD2Q6P5Q4 547 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 LINS1Q8NG48 757 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 LIMCH1Q9UPQ0 1083 aa13.19□□□□□ -0.3
BEST1-201ENST00000378043 DIAPH3Q9NSV4 1193 aa13.18□□□□□ -0.3
BEST1-201ENST00000378043 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
BEST1-201ENST00000378043 KCNB2Q92953 911 aa13.18□□□□□ -0.3
BEST1-201ENST00000378043 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
BEST1-201ENST00000378043 BICC1Q9H694 974 aaKnown RBP13.18□□□□□ -0.3
BEST1-201ENST00000378043 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
BEST1-201ENST00000378043 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
BEST1-201ENST00000378043 C5P01031 1676 aa13.17□□□□□ -0.3
BEST1-201ENST00000378043 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
BEST1-201ENST00000378043 IFIT2P09913 472 aaKnown RBP13.17□□□□□ -0.3
BEST1-201ENST00000378043 SYT1P21579 422 aa13.17□□□□□ -0.3
BEST1-201ENST00000378043 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
BEST1-201ENST00000378043 AACSQ86V21 672 aa13.17□□□□□ -0.3
BEST1-201ENST00000378043 ERC1Q8IUD2 1116 aa13.17□□□□□ -0.3
BEST1-201ENST00000378043 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
BEST1-201ENST00000378043 LMTK3Q96Q04 1460 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 DTNBO60941 627 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
BEST1-201ENST00000378043 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 ERBB3P21860 1342 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
BEST1-201ENST00000378043 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
BEST1-201ENST00000378043 RUFY2Q8WXA3 655 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 EVI5LQ96CN4 794 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
BEST1-201ENST00000378043 NPHP4O75161 1426 aaPredicted RBP13.15□□□□□ -0.3
BEST1-201ENST00000378043 STX6O43752 255 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 ST3GAL1Q11201 340 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
BEST1-201ENST00000378043 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
BEST1-201ENST00000378043 NOL7Q9UMY1 257 aaKnown RBP13.15□□□□□ -0.3
BEST1-201ENST00000378043 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 KDM6AO15550 1401 aaPredicted RBP13.15□□□□□ -0.3
BEST1-201ENST00000378043 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 CCDC8Q9H0W5 538 aaPredicted RBP13.15□□□□□ -0.3
BEST1-201ENST00000378043 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
BEST1-201ENST00000378043 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
BEST1-201ENST00000378043 GPATCH3Q96I76 525 aa13.14□□□□□ -0.31
BEST1-201ENST00000378043 TM6SF1Q9BZW5 370 aa13.14□□□□□ -0.31
BEST1-201ENST00000378043 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
BEST1-201ENST00000378043 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
BEST1-201ENST00000378043 DDX58O95786 925 aaKnown RBP13.14□□□□□ -0.31
BEST1-201ENST00000378043 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
BEST1-201ENST00000378043 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
BEST1-201ENST00000378043 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
BEST1-201ENST00000378043 MSNP26038 577 aaKnown RBP13.13□□□□□ -0.31
BEST1-201ENST00000378043 EPHA10Q5JZY3 1008 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 CCDC83Q8IWF9 413 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 PDRG1Q9NUG6 133 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 F13A1P00488 732 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
BEST1-201ENST00000378043 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
BEST1-201ENST00000378043 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
BEST1-201ENST00000378043 SIL1Q9H173 461 aa13.13□□□□□ -0.31
BEST1-201ENST00000378043 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
BEST1-201ENST00000378043 NEURL1BA8MQ27 555 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 MYL6BP14649 208 aa13.12□□□□□ -0.31
BEST1-201ENST00000378043 ME3Q16798 604 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms