RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 CNBD1Q8NA66 436 aa23.27■■□□□ 1.32
HLA-A-201ENST00000376802 ARFGEF2Q9Y6D5 1785 aa23.26■■□□□ 1.31
HLA-A-201ENST00000376802 NBPF26B4DH59 902 aa23.26■■□□□ 1.31
HLA-A-201ENST00000376802 HTRA3P83110 453 aa23.26■■□□□ 1.31
HLA-A-201ENST00000376802 NBPF10Q6P3W6 841 aaKnown RBP23.26■■□□□ 1.31
HLA-A-201ENST00000376802 NBPF15Q8N660 670 aa23.26■■□□□ 1.31
HLA-A-201ENST00000376802 CLEC4GQ6UXB4 293 aa23.25■■□□□ 1.31
HLA-A-201ENST00000376802 ZNF219Q9P2Y4 722 aaPredicted RBP23.25■■□□□ 1.31
HLA-A-201ENST00000376802 SRGNP10124 158 aa23.24■■□□□ 1.31
HLA-A-201ENST00000376802 VEGFAP15692 232 aaPredicted RBP23.23■■□□□ 1.31
HLA-A-201ENST00000376802 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
HLA-A-201ENST00000376802 STYK1Q6J9G0 422 aa23.23■■□□□ 1.31
HLA-A-201ENST00000376802 MIS18AQ9NYP9 233 aa23.23■■□□□ 1.31
HLA-A-201ENST00000376802 POTECB2RU33 542 aa23.22■■□□□ 1.31
HLA-A-201ENST00000376802 ST5P78524 1137 aa23.22■■□□□ 1.31
HLA-A-201ENST00000376802 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
HLA-A-201ENST00000376802 KDM3BQ7LBC6 1761 aa23.21■■□□□ 1.31
HLA-A-201ENST00000376802 SMC1BQ8NDV3 1235 aa23.21■■□□□ 1.31
HLA-A-201ENST00000376802 PLEKHF1Q96S99 279 aa23.21■■□□□ 1.31
HLA-A-201ENST00000376802 LTBP3Q9NS15 1303 aa23.2■■□□□ 1.31
HLA-A-201ENST00000376802 NPHP1O15259 732 aa23.2■■□□□ 1.3
HLA-A-201ENST00000376802 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
HLA-A-201ENST00000376802 NBPF5PQ86XG9 351 aaPredicted RBP23.2■■□□□ 1.3
HLA-A-201ENST00000376802 CNKSR1Q969H4 720 aa23.2■■□□□ 1.3
HLA-A-201ENST00000376802 MASTLQ96GX5 879 aa23.2■■□□□ 1.3
HLA-A-201ENST00000376802 ZNF652Q9Y2D9 606 aa23.19■■□□□ 1.3
HLA-A-201ENST00000376802 KLRG2A4D1S0 409 aaPredicted RBP23.18■■□□□ 1.3
HLA-A-201ENST00000376802 RGL2O15211 777 aa23.18■■□□□ 1.3
HLA-A-201ENST00000376802 ERFEQ4G0M1 354 aa23.18■■□□□ 1.3
HLA-A-201ENST00000376802 C7orf43Q8WVR3 580 aa23.18■■□□□ 1.3
HLA-A-201ENST00000376802 KLRG1Q96E93 195 aa23.18■■□□□ 1.3
HLA-A-201ENST00000376802 PCNTO95613 3336 aa23.18■■□□□ 1.3
HLA-A-201ENST00000376802 HLFQ16534 295 aa23.17■■□□□ 1.3
HLA-A-201ENST00000376802 NUP98P52948 1817 aa23.17■■□□□ 1.3
HLA-A-201ENST00000376802 DPY19L2Q6NUT2 758 aa23.16■■□□□ 1.3
HLA-A-201ENST00000376802 TAOK3Q9H2K8 898 aa23.16■■□□□ 1.3
HLA-A-201ENST00000376802 NIP7Q9Y221 180 aaKnown RBP eCLIP23.16■■□□□ 1.36e-6■□□□□ 11.1
HLA-A-201ENST00000376802 TPTE2Q6XPS3 522 aa23.15■■□□□ 1.3
HLA-A-201ENST00000376802 JMYQ8N9B5 988 aa23.15■■□□□ 1.3
HLA-A-201ENST00000376802 THUMPD2Q9BTF0 503 aaKnown RBP23.14■■□□□ 1.3
HLA-A-201ENST00000376802 NPR1P16066 1061 aa23.13■■□□□ 1.29
HLA-A-201ENST00000376802 EIF4A1P60842 406 aaKnown RBP23.13■■□□□ 1.29
HLA-A-201ENST00000376802 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
HLA-A-201ENST00000376802 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
HLA-A-201ENST00000376802 SOGA3Q5TF21 947 aa23.12■■□□□ 1.29
HLA-A-201ENST00000376802 FAM177BA6PVY3 158 aa23.11■■□□□ 1.29
HLA-A-201ENST00000376802 NEFMP07197 916 aa23.11■■□□□ 1.29
HLA-A-201ENST00000376802 DDNO94850 711 aaPredicted RBP23.1■■□□□ 1.29
HLA-A-201ENST00000376802 OLFM4Q6UX06 510 aa23.09■■□□□ 1.29
HLA-A-201ENST00000376802 NGEFQ8N5V2 710 aa23.09■■□□□ 1.29
HLA-A-201ENST00000376802 ERVV-1B6SEH8 477 aa23.08■■□□□ 1.29
HLA-A-201ENST00000376802 CCDC93Q567U6 631 aa23.08■■□□□ 1.29
HLA-A-201ENST00000376802 TTLL7Q6ZT98 887 aa23.08■■□□□ 1.29
HLA-A-201ENST00000376802 RRP7AQ9Y3A4 280 aaKnown RBP23.08■■□□□ 1.28
HLA-A-201ENST00000376802 MAP3K15Q6ZN16 1313 aa23.07■■□□□ 1.28
HLA-A-201ENST00000376802 CRY2Q49AN0 593 aa23.07■■□□□ 1.28
HLA-A-201ENST00000376802 ABCC12Q96J65 1359 aa23.06■■□□□ 1.28
HLA-A-201ENST00000376802 POTEIP0CG38 1075 aa23.06■■□□□ 1.28
HLA-A-201ENST00000376802 POTEJP0CG39 1038 aa23.06■■□□□ 1.28
HLA-A-201ENST00000376802 MYL6BP14649 208 aa23.06■■□□□ 1.28
HLA-A-201ENST00000376802 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
HLA-A-201ENST00000376802 SCN4AP35499 1836 aa23.05■■□□□ 1.28
HLA-A-201ENST00000376802 GTF2E1P29083 439 aaPredicted RBP23.05■■□□□ 1.28
HLA-A-201ENST00000376802 NUTM1Q86Y26 1132 aa23.05■■□□□ 1.28
HLA-A-201ENST00000376802 PNNQ9H307 717 aaKnown RBP23.05■■□□□ 1.28
HLA-A-201ENST00000376802 SNED1Q8TER0 1413 aa23.04■■□□□ 1.28
HLA-A-201ENST00000376802 UBN2Q6ZU65 1347 aa23.04■■□□□ 1.28
HLA-A-201ENST00000376802 MAPK8IP3Q9UPT6 1336 aa23.04■■□□□ 1.28
HLA-A-201ENST00000376802 ALDH1B1P30837 517 aa23.04■■□□□ 1.28
HLA-A-201ENST00000376802 ZNF277Q9NRM2 450 aaPredicted RBP23.04■■□□□ 1.28
HLA-A-201ENST00000376802 CHADLQ6NUI6 762 aa23.03■■□□□ 1.28
HLA-A-201ENST00000376802 LRP10Q7Z4F1 713 aa23.03■■□□□ 1.28
HLA-A-201ENST00000376802 RTKN2Q8IZC4 609 aa23.03■■□□□ 1.28
HLA-A-201ENST00000376802 L3MBTL3Q96JM7 780 aaPredicted RBP23.03■■□□□ 1.28
HLA-A-201ENST00000376802 NYXQ9GZU5 481 aa23.03■■□□□ 1.28
HLA-A-201ENST00000376802 ZBTB3Q9H5J0 574 aa23.03■■□□□ 1.28
HLA-A-201ENST00000376802 PDIA6Q15084 440 aa23.02■■□□□ 1.28
HLA-A-201ENST00000376802 KIF6Q6ZMV9 814 aa23.02■■□□□ 1.28
HLA-A-201ENST00000376802 ZNF34Q8IZ26 560 aa23.02■■□□□ 1.28
HLA-A-201ENST00000376802 ZNF541Q9H0D2 1346 aa23.01■■□□□ 1.27
HLA-A-201ENST00000376802 GPTP24298 496 aa23.01■■□□□ 1.27
HLA-A-201ENST00000376802 SUSD4Q5VX71 490 aa23.01■■□□□ 1.27
HLA-A-201ENST00000376802 RIC1Q4ADV7 1423 aa23.01■■□□□ 1.27
HLA-A-201ENST00000376802 IBTKQ9P2D0 1353 aaPredicted RBP23■■□□□ 1.27
HLA-A-201ENST00000376802 ERBB4Q15303 1308 aa23■■□□□ 1.27
HLA-A-201ENST00000376802 RIPK4P57078 832 aa23■■□□□ 1.27
HLA-A-201ENST00000376802 TSPYL4Q9UJ04 414 aa23■■□□□ 1.27
HLA-A-201ENST00000376802 HOXA10P31260 410 aaPredicted RBP22.99■■□□□ 1.27
HLA-A-201ENST00000376802 RALBP1Q15311 655 aa22.99■■□□□ 1.27
HLA-A-201ENST00000376802 COL13A1Q5TAT6 717 aaPredicted RBP22.99■■□□□ 1.27
HLA-A-201ENST00000376802 GIGYF2Q6Y7W6 1299 aaKnown RBP22.99■■□□□ 1.27
HLA-A-201ENST00000376802 SYNE4Q8N205 404 aa22.99■■□□□ 1.27
HLA-A-201ENST00000376802 TAF1DQ9H5J8 278 aaPredicted RBP22.99■■□□□ 1.27
HLA-A-201ENST00000376802 IQCA1LA6NCM1 817 aa22.98■■□□□ 1.27
HLA-A-201ENST00000376802 FZD9O00144 591 aa22.98■■□□□ 1.27
HLA-A-201ENST00000376802 NTSR2O95665 410 aa22.97■■□□□ 1.27
HLA-A-201ENST00000376802 IARSP41252 1262 aaKnown RBP22.97■■□□□ 1.27
HLA-A-201ENST00000376802 TMPOP42166 694 aaKnown RBP22.97■■□□□ 1.27
HLA-A-201ENST00000376802 SLC51AQ86UW1 340 aa22.97■■□□□ 1.27
HLA-A-201ENST00000376802 PSMD1Q99460 953 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms