RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 KIF3AQ9Y496 699 aa21.04■□□□□ 0.96
TRAF3IP1-201ENST00000373327 KRT85P78386 507 aa21.04■□□□□ 0.96
TRAF3IP1-201ENST00000373327 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
TRAF3IP1-201ENST00000373327 CNNM1Q9NRU3 951 aa21.04■□□□□ 0.96
TRAF3IP1-201ENST00000373327 CCDC57Q2TAC2 916 aa21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 HSP90AB3PQ58FF7 597 aa21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 GOLGA6L6A8MZA4 724 aa21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 NMIQ13287 307 aaPredicted RBP21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 TRDNQ13061 729 aa21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 ZSCAN30Q86W11 494 aa21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 SPATA32Q96LK8 384 aa21.03■□□□□ 0.96
TRAF3IP1-201ENST00000373327 EIF4A1P60842 406 aaKnown RBP21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 TTC39AQ5SRH9 613 aa21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 LMBR1LQ6UX01 489 aa21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 CHST3Q7LGC8 479 aa21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 MTMR7Q9Y216 660 aa21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 HIP1O00291 1037 aa21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 DNM1Q05193 864 aaKnown RBP21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 CEP126Q9P2H0 1117 aa21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 CCDC39Q9UFE4 941 aa21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.02■□□□□ 0.96
TRAF3IP1-201ENST00000373327 PTPRMP28827 1452 aa21.02■□□□□ 0.95
TRAF3IP1-201ENST00000373327 ADGRB1O14514 1584 aa21.01■□□□□ 0.95
TRAF3IP1-201ENST00000373327 RBSNQ9H1K0 784 aa21.01■□□□□ 0.95
TRAF3IP1-201ENST00000373327 CCDC73Q6ZRK6 1079 aa21.01■□□□□ 0.95
TRAF3IP1-201ENST00000373327 CCDC129Q6ZRS4 1044 aa21.01■□□□□ 0.95
TRAF3IP1-201ENST00000373327 EVI5LQ96CN4 794 aa21.01■□□□□ 0.95
TRAF3IP1-201ENST00000373327 TNMDQ9H2S6 317 aa21.01■□□□□ 0.95
TRAF3IP1-201ENST00000373327 ATP7BP35670 1465 aa21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 IFNL2Q8IZJ0 200 aa21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 AATKQ6ZMQ8 1374 aa21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 USP6P35125 1406 aa21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 PDCP20941 246 aa21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 IDH1O75874 414 aaKnown RBP21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 PNPLA6Q8IY17 1366 aa21■□□□□ 0.95
TRAF3IP1-201ENST00000373327 GADD45BO75293 160 aaPredicted RBP20.99■□□□□ 0.95
TRAF3IP1-201ENST00000373327 ME1P48163 572 aa20.99■□□□□ 0.95
TRAF3IP1-201ENST00000373327 ARHGAP31Q2M1Z3 1444 aa20.99■□□□□ 0.95
TRAF3IP1-201ENST00000373327 NEXMIFQ5QGS0 1516 aa20.99■□□□□ 0.95
TRAF3IP1-201ENST00000373327 SUCLG2Q96I99 432 aa20.99■□□□□ 0.95
TRAF3IP1-201ENST00000373327 CFAP74Q9C0B2 1584 aa20.99■□□□□ 0.95
TRAF3IP1-201ENST00000373327 LINS1Q8NG48 757 aa20.98■□□□□ 0.95
TRAF3IP1-201ENST00000373327 KIAA0232Q92628 1395 aa20.98■□□□□ 0.95
TRAF3IP1-201ENST00000373327 IFIT1P09914 478 aaKnown RBP20.98■□□□□ 0.95
TRAF3IP1-201ENST00000373327 CCDC82Q8N4S0 544 aa20.98■□□□□ 0.95
TRAF3IP1-201ENST00000373327 CCDC158Q5M9N0 1113 aa20.97■□□□□ 0.95
TRAF3IP1-201ENST00000373327 TIMM10P62072 90 aa20.97■□□□□ 0.95
TRAF3IP1-201ENST00000373327 BRF1Q92994 677 aa20.97■□□□□ 0.95
TRAF3IP1-201ENST00000373327 KIF6Q6ZMV9 814 aa20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 ZNF496Q96IT1 587 aaPredicted RBP20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 IQSEC2Q5JU85 1478 aa20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 TFCP2Q12800 502 aa20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 LMBRD1Q9NUN5 540 aa20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 SNX14Q9Y5W7 946 aa20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 SETBP1Q9Y6X0 1596 aa20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 SNRPA1P09661 255 aaKnown RBP20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 BRPF1P55201 1214 aaPredicted RBP20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 SYNE3Q6ZMZ3 975 aa20.96■□□□□ 0.95
TRAF3IP1-201ENST00000373327 NRDCO43847 1150 aa20.95■□□□□ 0.95
TRAF3IP1-201ENST00000373327 ZSCAN22P10073 491 aaPredicted RBP20.95■□□□□ 0.95
TRAF3IP1-201ENST00000373327 SYT1P21579 422 aa20.95■□□□□ 0.95
TRAF3IP1-201ENST00000373327 KIF2CQ99661 725 aa20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 NUP62CLQ9H1M0 184 aa20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 TMEM63CQ9P1W3 806 aa20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ARHGEF40Q8TER5 1519 aa20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ZSCAN31Q96LW9 406 aaPredicted RBP20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 USP16Q9Y5T5 823 aa20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 RASEFQ8IZ41 740 aa20.95■□□□□ 0.94
TRAF3IP1-201ENST00000373327 CCDC192P0DO97 292 aa20.94■□□□□ 0.94
TRAF3IP1-201ENST00000373327 PTH1RQ03431 593 aa20.94■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ZNF790Q6PG37 636 aa20.94■□□□□ 0.94
TRAF3IP1-201ENST00000373327 DIP2CQ9Y2E4 1556 aa20.94■□□□□ 0.94
TRAF3IP1-201ENST00000373327 CPS1P31327 1500 aa20.94■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ARHGEF10O15013 1369 aa20.94■□□□□ 0.94
TRAF3IP1-201ENST00000373327 SGSM2O43147 1006 aa20.93■□□□□ 0.94
TRAF3IP1-201ENST00000373327 VPS37DQ86XT2 251 aa20.93■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ZNF594Q96JF6 807 aaPredicted RBP20.93■□□□□ 0.94
TRAF3IP1-201ENST00000373327 LMTK2Q8IWU2 1503 aa20.93■□□□□ 0.94
TRAF3IP1-201ENST00000373327 LRSAM1Q6UWE0 723 aa20.93■□□□□ 0.94
TRAF3IP1-201ENST00000373327 CDK12Q9NYV4 1490 aaPredicted RBP20.93■□□□□ 0.94
TRAF3IP1-201ENST00000373327 CCDC144CPQ8IYA2 1237 aa20.93■□□□□ 0.94
TRAF3IP1-201ENST00000373327 KINO60870 393 aaKnown RBP20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 METTL24Q5JXM2 366 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 ANKRD1Q15327 319 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 CREB3L3Q68CJ9 461 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 PIK3C2BO00750 1634 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 STK38Q15208 465 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 FILIP1Q7Z7B0 1213 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 A1BGP04217 495 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 CCDC183Q5T5S1 534 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 CPLX2Q6PUV4 134 aaKnown RBP20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 DBNDD2Q9BQY9 259 aa20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 DDX21Q9NR30 783 aaKnown RBP eCLIP20.92■□□□□ 0.94
TRAF3IP1-201ENST00000373327 PTCH1Q13635 1447 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms