RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 NOL10Q9BSC4 688 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 NDUFB9Q9Y6M9 179 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 TTC21BQ7Z4L5 1316 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MINDY4BA8MYZ0 360 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 BIN1O00499 593 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 GLRX3O76003 335 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 PDCP20941 246 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 TSR1Q2NL82 804 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 MRPL50Q8N5N7 158 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 CWC22Q9HCG8 908 aaKnown RBP10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 METTL24Q5JXM2 366 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 CHST3Q7LGC8 479 aa10.79□□□□□ -0.68
SMARCA1-202ENST00000371122 ASXL1Q8IXJ9 1541 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 XRCC6P12956 609 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 TTC22Q5TAA0 569 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC39Q9UFE4 941 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 PDE1AP54750 535 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 HSP90AA4PQ58FG1 418 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 EYA1Q99502 592 aa10.78□□□□□ -0.68
SMARCA1-202ENST00000371122 CCDC173Q0VFZ6 552 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 COPS6Q7L5N1 327 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 TMX3Q96JJ7 454 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 ZBTB40Q9NUA8 1239 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 A0A1W2PP64 1363 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 RALGAPBQ86X10 1494 aa10.77□□□□□ -0.68
SMARCA1-202ENST00000371122 NAP1L1P55209 391 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 KRT28Q7Z3Y7 464 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 RHPN1Q8TCX5 695 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 RAI14Q9P0K7 980 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 LRP2BPQ9P2M1 347 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 IFIT1P09914 478 aaKnown RBP10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 CCDC192P0DO97 292 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 TDO2P48775 406 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 TMX1Q9H3N1 280 aa10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 DBF4Q9UBU7 674 aaPredicted RBP10.77□□□□□ -0.69
SMARCA1-202ENST00000371122 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 HCLS1P14317 486 aaPredicted RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 HSPA2P54652 639 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 ANKRD24Q8TF21 1146 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 XIRP1Q702N8 1843 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 SERPINC1P01008 464 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 DHX8Q14562 1220 aaKnown RBP10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 XAGE3Q8WTP9 111 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 NUP62CLQ9H1M0 184 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 WWC3Q9ULE0 1092 aa10.76□□□□□ -0.69
SMARCA1-202ENST00000371122 A0A0U1RQG5 324 aaPredicted RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TNNT3P45378 269 aaPredicted RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 FAM173BQ6P4H8 233 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 LARP1Q6PKG0 1096 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 MNS1Q8NEH6 495 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TPM1P09493 284 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 KCNA6P17658 529 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 PRDM10Q9NQV6 1147 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 CIZ1Q9ULV3 898 aaPredicted RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 PLEKHG1Q9ULL1 1385 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 UQCRHLA0A096LP55 91 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 UQCRHP07919 91 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 KLHL10Q6JEL2 608 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TRIM34Q9BYJ4 488 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 ECHDC1Q9NTX5 307 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 TRMT1Q9NXH9 659 aaKnown RBP10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 ADAMTS13Q76LX8 1427 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 ALKQ9UM73 1620 aa10.75□□□□□ -0.69
SMARCA1-202ENST00000371122 GJB2P29033 226 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 HDAC1Q13547 482 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 AMOTL1Q8IY63 956 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ABCC11Q96J66 1382 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ZHX3Q9H4I2 956 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 OLFM4Q6UX06 510 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 TRMT1LQ7Z2T5 733 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ANKRD44Q8N8A2 993 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 CPS1P31327 1500 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 HIP1O00291 1037 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 LGR6Q9HBX8 967 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 TRMT112Q9UI30 125 aaKnown RBP10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 CNPY2Q9Y2B0 182 aa10.74□□□□□ -0.69
SMARCA1-202ENST00000371122 ANKRD36BQ8N2N9 1353 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 SART3Q15020 963 aaKnown RBP10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 CEP85Q6P2H3 762 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 KCNH5Q8NCM2 988 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 BRF1Q92994 677 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 LIMCH1Q9UPQ0 1083 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 RIMS2Q9UQ26 1411 aa10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 IPO7O95373 1038 aaKnown RBP10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 ZBTB7BO15156 539 aaPredicted RBP10.73□□□□□ -0.69
SMARCA1-202ENST00000371122 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms