RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CDC42BPBQ9Y5S2 1711 aa5.01□□□□□ -1.61
ECHDC1-205ENST00000368295 MROH1Q8NDA8 1641 aa5.01□□□□□ -1.61
ECHDC1-205ENST00000368295 FAM177A1Q8N128 213 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-205ENST00000368295 SYCP2Q9BX26 1530 aa5.01□□□□□ -1.61
ECHDC1-205ENST00000368295 MST1RQ04912 1400 aa5.01□□□□□ -1.61
ECHDC1-205ENST00000368295 ERVK-7P63135 1459 aa5.01□□□□□ -1.61
ECHDC1-205ENST00000368295 TMEM2Q9UHN6 1383 aa5□□□□□ -1.61
ECHDC1-205ENST00000368295 GPATCH8Q9UKJ3 1502 aaKnown RBP5□□□□□ -1.61
ECHDC1-205ENST00000368295 SNRPBP14678 240 aaKnown RBP5□□□□□ -1.61
ECHDC1-205ENST00000368295 YBX3P16989 372 aaKnown RBP eCLIP5□□□□□ -1.61
ECHDC1-205ENST00000368295 MCM6Q14566 821 aa5□□□□□ -1.61
ECHDC1-205ENST00000368295 FOXD4L5Q5VV16 416 aaPredicted RBP5□□□□□ -1.61
ECHDC1-205ENST00000368295 CCDC82Q8N4S0 544 aa5□□□□□ -1.61
ECHDC1-205ENST00000368295 FOXD4L4Q8WXT5 416 aaPredicted RBP5□□□□□ -1.61
ECHDC1-205ENST00000368295 SLC6A16Q9GZN6 736 aa5□□□□□ -1.61
ECHDC1-205ENST00000368295 DXOO77932 396 aaKnown RBP5□□□□□ -1.61
ECHDC1-205ENST00000368295 CANXP27824 592 aaKnown RBP5□□□□□ -1.61
ECHDC1-205ENST00000368295 FAM160A2Q8N612 972 aaPredicted RBP5□□□□□ -1.61
ECHDC1-205ENST00000368295 MYOM2P54296 1465 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 AATKQ6ZMQ8 1374 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 PDE4DIPQ5VU43 2346 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 WDR90Q96KV7 1748 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 CLSTN1O94985 981 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 GDF11O95390 407 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 MMP16P51512 607 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 XPCQ01831 940 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 PTPRNQ16849 979 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 ZNF428Q96B54 188 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 RREB1Q92766 1687 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 SLIT2O94813 1529 aa4.99□□□□□ -1.61
ECHDC1-205ENST00000368295 CASZ1Q86V15 1759 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 RNF225M0QZC1 329 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 GSK3AP49840 483 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 ZNF326Q5BKZ1 582 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 LYPD8Q6UX82 237 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 NLGN2Q8NFZ4 835 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 ABHD8Q96I13 439 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 GZF1Q9H116 711 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 PRM3Q9NNZ6 103 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 ATP13A2Q9NQ11 1180 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 PRDM9Q9NQV7 894 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 NXF1Q9UBU9 619 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 USP19O94966 1318 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 KIAA1210Q9ULL0 1709 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 INO80Q9ULG1 1556 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 DLL1O00548 723 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 CTDSPL2Q05D32 466 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 TICAM2Q86XR7 235 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 PNMA1Q8ND90 353 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 SNRKQ9NRH2 765 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 PKD2L1Q9P0L9 805 aa4.98□□□□□ -1.61
ECHDC1-205ENST00000368295 CCDC85CA6NKD9 419 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 S1PR4O95977 384 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 VPS72Q15906 364 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 CC2D2BQ6DHV5 1058 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 CYP4X1Q8N118 509 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 MTMR14Q8NCE2 650 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 ORAI2Q96SN7 254 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 PSMD1Q99460 953 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 TOR4AQ9NXH8 423 aa4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 CFAP65Q6ZU64 1925 aaKnown RBP4.97□□□□□ -1.61
ECHDC1-205ENST00000368295 CCNYL3P0C7X3 344 aa4.96□□□□□ -1.61
ECHDC1-205ENST00000368295 RASSF7Q02833 373 aa4.96□□□□□ -1.61
ECHDC1-205ENST00000368295 NUDT12Q9BQG2 462 aa4.96□□□□□ -1.61
ECHDC1-205ENST00000368295 ADCY9O60503 1353 aa4.96□□□□□ -1.62
ECHDC1-205ENST00000368295 PPP1R15AO75807 674 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-205ENST00000368295 LRRN4Q8WUT4 740 aa4.96□□□□□ -1.62
ECHDC1-205ENST00000368295 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-205ENST00000368295 NDUFB9Q9Y6M9 179 aa4.96□□□□□ -1.62
ECHDC1-205ENST00000368295 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-205ENST00000368295 SOS2Q07890 1332 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-205ENST00000368295 CUL9Q8IWT3 2517 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 EFCAB6Q5THR3 1501 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 ADGRB2O60241 1585 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 TNRC18O15417 2968 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 PPM1GO15355 546 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 PER1O15534 1290 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 F12P00748 615 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 FOXC1Q12948 553 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 AMOTL2Q9Y2J4 779 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 PREX2Q70Z35 1606 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 A6NJR5 290 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 PATL2C9JE40 543 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 PPEF1O14829 653 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 FOXN1O15353 648 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 CTHP32929 405 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 KCNH2Q12809 1159 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 WWC1Q8IX03 1113 aa4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 HMX1Q9NP08 348 aaPredicted RBP4.95□□□□□ -1.62
ECHDC1-205ENST00000368295 DHX29Q7Z478 1369 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 PARD3Q8TEW0 1356 aa4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 PIK3C2BO00750 1634 aa4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 CHD2O14647 1828 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 TROQ12816 1431 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 CCDC24Q8N4L8 307 aa4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 ARMC2Q8NEN0 867 aa4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 ADGRL3Q9HAR2 1447 aa4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 ZC3H4Q9UPT8 1303 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 FCF1Q9Y324 198 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-205ENST00000368295 NCOA3Q9Y6Q9 1424 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms