RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
PARP1-203ENST00000366794 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
PARP1-203ENST00000366794 GOLGA6L19H0YKK7 550 aa16.89■□□□□ 0.29
PARP1-203ENST00000366794 TIMM10P62072 90 aa16.89■□□□□ 0.29
PARP1-203ENST00000366794 GIMAP6Q6P9H5 292 aa16.89■□□□□ 0.29
PARP1-203ENST00000366794 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
PARP1-203ENST00000366794 INO80Q9ULG1 1556 aaPredicted RBP16.89■□□□□ 0.29
PARP1-203ENST00000366794 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
PARP1-203ENST00000366794 TRDNQ13061 729 aa16.88■□□□□ 0.29
PARP1-203ENST00000366794 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
PARP1-203ENST00000366794 ZNF594Q96JF6 807 aaPredicted RBP16.87■□□□□ 0.29
PARP1-203ENST00000366794 SDF4Q9BRK5 362 aa16.87■□□□□ 0.29
PARP1-203ENST00000366794 ARAP3Q8WWN8 1544 aa16.87■□□□□ 0.29
PARP1-203ENST00000366794 A1BGP04217 495 aa16.87■□□□□ 0.29
PARP1-203ENST00000366794 HCLS1P14317 486 aaPredicted RBP16.87■□□□□ 0.29
PARP1-203ENST00000366794 HTATSF1O43719 755 aaKnown RBP16.87■□□□□ 0.29
PARP1-203ENST00000366794 PIBF1Q8WXW3 757 aa16.87■□□□□ 0.29
PARP1-203ENST00000366794 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
PARP1-203ENST00000366794 STX6O43752 255 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 DNM1Q05193 864 aaKnown RBP16.86■□□□□ 0.29
PARP1-203ENST00000366794 CCDC173Q0VFZ6 552 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 SASS6Q6UVJ0 657 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 ALKQ9UM73 1620 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 IFIT1P09914 478 aaKnown RBP16.86■□□□□ 0.29
PARP1-203ENST00000366794 USP48Q86UV5 1035 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 VPS37DQ86XT2 251 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 TRIM5Q9C035 493 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
PARP1-203ENST00000366794 TFCP2Q12800 502 aa16.85■□□□□ 0.29
PARP1-203ENST00000366794 CCDC144CPQ8IYA2 1237 aa16.85■□□□□ 0.29
PARP1-203ENST00000366794 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
PARP1-203ENST00000366794 USP6P35125 1406 aa16.85■□□□□ 0.29
PARP1-203ENST00000366794 LINS1Q8NG48 757 aa16.85■□□□□ 0.29
PARP1-203ENST00000366794 SPATA32Q96LK8 384 aa16.85■□□□□ 0.29
PARP1-203ENST00000366794 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
PARP1-203ENST00000366794 ME1P48163 572 aa16.84■□□□□ 0.29
PARP1-203ENST00000366794 CCDC158Q5M9N0 1113 aa16.84■□□□□ 0.29
PARP1-203ENST00000366794 ZNF790Q6PG37 636 aa16.84■□□□□ 0.29
PARP1-203ENST00000366794 BRF1Q92994 677 aa16.84■□□□□ 0.29
PARP1-203ENST00000366794 LRRC7Q96NW7 1537 aa16.84■□□□□ 0.29
PARP1-203ENST00000366794 KRT85P78386 507 aa16.84■□□□□ 0.29
PARP1-203ENST00000366794 GADD45BO75293 160 aaPredicted RBP16.84■□□□□ 0.29
PARP1-203ENST00000366794 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
PARP1-203ENST00000366794 SLC4A8Q2Y0W8 1093 aa16.83■□□□□ 0.29
PARP1-203ENST00000366794 TMOD3Q9NYL9 352 aa16.83■□□□□ 0.29
PARP1-203ENST00000366794 EVI5LQ96CN4 794 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 C19orf44Q9H6X5 657 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 PTPRMP28827 1452 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 CCDC73Q6ZRK6 1079 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 VSIG10Q8N0Z9 540 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 AXIN2Q9Y2T1 843 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 KIF3AQ9Y496 699 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
PARP1-203ENST00000366794 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 ACSBG1Q96GR2 724 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 TLR7Q9NYK1 1049 aaKnown RBP16.82■□□□□ 0.28
PARP1-203ENST00000366794 IQGAP1P46940 1657 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 PTH1RQ03431 593 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 TNMDQ9H2S6 317 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 ABCF2Q9UG63 623 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 MROH2AA6NES4 1674 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 SEC62Q99442 399 aaKnown RBP16.82■□□□□ 0.28
PARP1-203ENST00000366794 TBC1D2BQ9UPU7 963 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 DIP2CQ9Y2E4 1556 aa16.82■□□□□ 0.28
PARP1-203ENST00000366794 RBSNQ9H1K0 784 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 HIP1O00291 1037 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 RAD21O60216 631 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
PARP1-203ENST00000366794 ISM2Q6H9L7 571 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 RASSF8Q8NHQ8 419 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
PARP1-203ENST00000366794 FAM89AQ96GI7 184 aa16.81■□□□□ 0.28
PARP1-203ENST00000366794 CPS1P31327 1500 aa16.8■□□□□ 0.28
PARP1-203ENST00000366794 ADGRB1O14514 1584 aa16.8■□□□□ 0.28
PARP1-203ENST00000366794 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
PARP1-203ENST00000366794 AATKQ6ZMQ8 1374 aa16.8■□□□□ 0.28
PARP1-203ENST00000366794 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
PARP1-203ENST00000366794 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
PARP1-203ENST00000366794 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
PARP1-203ENST00000366794 PDCP20941 246 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 SYT1P21579 422 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 TRMT112Q9UI30 125 aaKnown RBP16.79■□□□□ 0.28
PARP1-203ENST00000366794 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 SLFNL1Q499Z3 407 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 CAMSAP1Q5T5Y3 1602 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 PES1O00541 588 aaKnown RBP16.79■□□□□ 0.28
PARP1-203ENST00000366794 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
PARP1-203ENST00000366794 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 NUP133Q8WUM0 1156 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 LDHAL6AQ6ZMR3 332 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
PARP1-203ENST00000366794 MPHOSPH8Q99549 860 aa16.79■□□□□ 0.28
PARP1-203ENST00000366794 ATP7BP35670 1465 aa16.78■□□□□ 0.28
PARP1-203ENST00000366794 STK38Q15208 465 aa16.78■□□□□ 0.28
PARP1-203ENST00000366794 FRMPD1Q5SYB0 1578 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms