RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PIP4K2AP48426 406 aaPredicted RBP28.28■■■□□ 2.12
CD47-202ENST00000361309 ERFEQ4G0M1 354 aa28.28■■■□□ 2.12
CD47-202ENST00000361309 ST5P78524 1137 aa28.27■■■□□ 2.12
CD47-202ENST00000361309 PRAMEF22A3QJZ6 481 aa28.26■■■□□ 2.11
CD47-202ENST00000361309 CNKSR1Q969H4 720 aa28.26■■■□□ 2.11
CD47-202ENST00000361309 LTBP3Q9NS15 1303 aa28.25■■■□□ 2.11
CD47-202ENST00000361309 SRGNP10124 158 aa28.25■■■□□ 2.11
CD47-202ENST00000361309 COL13A1Q5TAT6 717 aaPredicted RBP28.25■■■□□ 2.11
CD47-202ENST00000361309 STYK1Q6J9G0 422 aa28.25■■■□□ 2.11
CD47-202ENST00000361309 TAOK3Q9H2K8 898 aa28.25■■■□□ 2.11
CD47-202ENST00000361309 NUDCQ9Y266 331 aa28.25■■■□□ 2.11
CD47-202ENST00000361309 PRPF40BQ6NWY9 871 aaKnown RBP28.24■■■□□ 2.11
CD47-202ENST00000361309 MCM10Q7L590 875 aa28.24■■■□□ 2.11
CD47-202ENST00000361309 U2AF1L5P0DN76 240 aaPredicted RBP28.23■■■□□ 2.11
CD47-202ENST00000361309 U2AF1Q01081 240 aaKnown RBP eCLIP28.23■■■□□ 2.11
CD47-202ENST00000361309 RTF1Q92541 710 aaKnown RBP28.23■■■□□ 2.11
CD47-202ENST00000361309 MASTLQ96GX5 879 aa28.23■■■□□ 2.11
CD47-202ENST00000361309 SNRPA1P09661 255 aaKnown RBP28.21■■■□□ 2.11
CD47-202ENST00000361309 CLEC4GQ6UXB4 293 aa28.21■■■□□ 2.11
CD47-202ENST00000361309 NBPF5PQ86XG9 351 aaPredicted RBP28.2■■■□□ 2.1
CD47-202ENST00000361309 PPP2R1AP30153 589 aa28.19■■■□□ 2.1
CD47-202ENST00000361309 DCTN1Q14203 1278 aa28.19■■■□□ 2.1
CD47-202ENST00000361309 SOGA3Q5TF21 947 aa28.19■■■□□ 2.1
CD47-202ENST00000361309 ZNF652Q9Y2D9 606 aa28.19■■■□□ 2.1
CD47-202ENST00000361309 DDNO94850 711 aaPredicted RBP28.18■■■□□ 2.1
CD47-202ENST00000361309 DLG5Q8TDM6 1919 aa28.17■■■□□ 2.1
CD47-202ENST00000361309 NBPF26B4DH59 902 aa28.16■■■□□ 2.1
CD47-202ENST00000361309 NBPF10Q6P3W6 841 aaKnown RBP28.16■■■□□ 2.1
CD47-202ENST00000361309 NBPF15Q8N660 670 aa28.16■■■□□ 2.1
CD47-202ENST00000361309 LAMB4A4D0S4 1761 aa28.15■■■□□ 2.1
CD47-202ENST00000361309 C7orf43Q8WVR3 580 aa28.15■■■□□ 2.1
CD47-202ENST00000361309 SCN4AP35499 1836 aa28.15■■■□□ 2.1
CD47-202ENST00000361309 NPR1P16066 1061 aa28.14■■■□□ 2.1
CD47-202ENST00000361309 CHADLQ6NUI6 762 aa28.14■■■□□ 2.1
CD47-202ENST00000361309 NIP7Q9Y221 180 aaKnown RBP eCLIP28.14■■■□□ 2.1
CD47-202ENST00000361309 HTATSF1O43719 755 aaKnown RBP28.13■■■□□ 2.09
CD47-202ENST00000361309 POTEIP0CG38 1075 aa28.13■■■□□ 2.09
CD47-202ENST00000361309 POTEJP0CG39 1038 aa28.13■■■□□ 2.09
CD47-202ENST00000361309 HSPA1AP0DMV8 641 aaKnown RBP28.13■■■□□ 2.09
CD47-202ENST00000361309 HSPA1BP0DMV9 641 aaKnown RBP28.13■■■□□ 2.09
CD47-202ENST00000361309 CCDC93Q567U6 631 aa28.13■■■□□ 2.09
CD47-202ENST00000361309 TPTE2Q6XPS3 522 aa28.13■■■□□ 2.09
CD47-202ENST00000361309 KLRG2A4D1S0 409 aaPredicted RBP28.12■■■□□ 2.09
CD47-202ENST00000361309 FAM177BA6PVY3 158 aa28.12■■■□□ 2.09
CD47-202ENST00000361309 NUP98P52948 1817 aa28.12■■■□□ 2.09
CD47-202ENST00000361309 TAF7Q15545 349 aaPredicted RBP28.11■■■□□ 2.09
CD47-202ENST00000361309 RGL2O15211 777 aa28.1■■■□□ 2.09
CD47-202ENST00000361309 TNS4Q8IZW8 715 aa28.1■■■□□ 2.09
CD47-202ENST00000361309 MIS18AQ9NYP9 233 aa28.1■■■□□ 2.09
CD47-202ENST00000361309 HLFQ16534 295 aa28.09■■■□□ 2.09
CD47-202ENST00000361309 KDM3BQ7LBC6 1761 aa28.09■■■□□ 2.09
CD47-202ENST00000361309 FKBP4Q02790 459 aaKnown RBP eCLIP28.08■■■□□ 2.09
CD47-202ENST00000361309 OLFM4Q6UX06 510 aa28.08■■■□□ 2.09
CD47-202ENST00000361309 CREBZFQ9NS37 354 aa28.08■■■□□ 2.09
CD47-202ENST00000361309 IQCA1LA6NCM1 817 aa28.07■■■□□ 2.08
CD47-202ENST00000361309 CAPN15O75808 1086 aa28.07■■■□□ 2.08
CD47-202ENST00000361309 L3MBTL3Q96JM7 780 aaPredicted RBP28.07■■■□□ 2.08
CD47-202ENST00000361309 ZNF277Q9NRM2 450 aaPredicted RBP28.07■■■□□ 2.08
CD47-202ENST00000361309 TAF1DQ9H5J8 278 aaPredicted RBP28.05■■■□□ 2.08
CD47-202ENST00000361309 MKRN1Q9UHC7 482 aaKnown RBP28.05■■■□□ 2.08
CD47-202ENST00000361309 ZNF541Q9H0D2 1346 aa28.04■■■□□ 2.08
CD47-202ENST00000361309 GTF2E1P29083 439 aaPredicted RBP28.04■■■□□ 2.08
CD47-202ENST00000361309 LDHDQ86WU2 507 aa28.04■■■□□ 2.08
CD47-202ENST00000361309 RTKN2Q8IZC4 609 aa28.04■■■□□ 2.08
CD47-202ENST00000361309 NGEFQ8N5V2 710 aa28.04■■■□□ 2.08
CD47-202ENST00000361309 ALDH1B1P30837 517 aa28.03■■■□□ 2.08
CD47-202ENST00000361309 PASKQ96RG2 1323 aa28■■■□□ 2.07
CD47-202ENST00000361309 NEFMP07197 916 aa28■■■□□ 2.07
CD47-202ENST00000361309 SYNE4Q8N205 404 aa28■■■□□ 2.07
CD47-202ENST00000361309 ABCC12Q96J65 1359 aa27.99■■■□□ 2.07
CD47-202ENST00000361309 IARSP41252 1262 aaKnown RBP27.99■■■□□ 2.07
CD47-202ENST00000361309 EAPPQ56P03 285 aaPredicted RBP27.99■■■□□ 2.07
CD47-202ENST00000361309 NUTM1Q86Y26 1132 aa27.99■■■□□ 2.07
CD47-202ENST00000361309 PNISRQ8TF01 805 aaKnown RBP27.99■■■□□ 2.07
CD47-202ENST00000361309 NYXQ9GZU5 481 aa27.99■■■□□ 2.07
CD47-202ENST00000361309 RRP7AQ9Y3A4 280 aaKnown RBP27.99■■■□□ 2.07
CD47-202ENST00000361309 ADAMTSL1Q8N6G6 1762 aa27.99■■■□□ 2.07
CD47-202ENST00000361309 ERVV-1B6SEH8 477 aa27.98■■■□□ 2.07
CD47-202ENST00000361309 HACL1Q9UJ83 578 aa27.98■■■□□ 2.07
CD47-202ENST00000361309 MAP3K15Q6ZN16 1313 aa27.97■■■□□ 2.07
CD47-202ENST00000361309 EIF4A1P60842 406 aaKnown RBP27.97■■■□□ 2.07
CD47-202ENST00000361309 CRY2Q49AN0 593 aa27.97■■■□□ 2.07
CD47-202ENST00000361309 TTLL7Q6ZT98 887 aa27.97■■■□□ 2.07
CD47-202ENST00000361309 CNTNAP1P78357 1384 aa27.97■■■□□ 2.07
CD47-202ENST00000361309 SNED1Q8TER0 1413 aa27.96■■■□□ 2.07
CD47-202ENST00000361309 FZD9O00144 591 aa27.96■■■□□ 2.07
CD47-202ENST00000361309 PLEKHF1Q96S99 279 aa27.96■■■□□ 2.07
CD47-202ENST00000361309 THUMPD2Q9BTF0 503 aaKnown RBP27.96■■■□□ 2.07
CD47-202ENST00000361309 ITGBL1O95965 494 aaPredicted RBP27.95■■■□□ 2.06
CD47-202ENST00000361309 MYL6BP14649 208 aa27.95■■■□□ 2.06
CD47-202ENST00000361309 EPHX2P34913 555 aa27.95■■■□□ 2.06
CD47-202ENST00000361309 KIF6Q6ZMV9 814 aa27.95■■■□□ 2.06
CD47-202ENST00000361309 CLEC11AQ9Y240 323 aa27.95■■■□□ 2.06
CD47-202ENST00000361309 RNF123Q5XPI4 1314 aa27.94■■■□□ 2.06
CD47-202ENST00000361309 GPTP24298 496 aa27.94■■■□□ 2.06
CD47-202ENST00000361309 PSMD1Q99460 953 aa27.94■■■□□ 2.06
CD47-202ENST00000361309 TMEM88BA6NKF7 163 aa27.93■■■□□ 2.06
CD47-202ENST00000361309 NFE2L2Q16236 605 aa27.93■■■□□ 2.06
CD47-202ENST00000361309 ZBTB3Q9H5J0 574 aa27.93■■■□□ 2.06
CD47-202ENST00000361309 UBN2Q6ZU65 1347 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms