RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 JMYQ8N9B5 988 aa20.12■□□□□ 0.81
GDPD3-201ENST00000360688 ARFGEF2Q9Y6D5 1785 aa20.12■□□□□ 0.81
GDPD3-201ENST00000360688 PIP4K2AP48426 406 aaPredicted RBP20.11■□□□□ 0.81
GDPD3-201ENST00000360688 MCM10Q7L590 875 aa20.11■□□□□ 0.81
GDPD3-201ENST00000360688 NPHP1O15259 732 aa20.1■□□□□ 0.81
GDPD3-201ENST00000360688 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
GDPD3-201ENST00000360688 POTECB2RU33 542 aa20.09■□□□□ 0.81
GDPD3-201ENST00000360688 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
GDPD3-201ENST00000360688 SRGNP10124 158 aa20.09■□□□□ 0.81
GDPD3-201ENST00000360688 ST5P78524 1137 aa20.09■□□□□ 0.81
GDPD3-201ENST00000360688 CNKSR1Q969H4 720 aa20.09■□□□□ 0.81
GDPD3-201ENST00000360688 LTBP3Q9NS15 1303 aa20.08■□□□□ 0.81
GDPD3-201ENST00000360688 DCTN1Q14203 1278 aa20.08■□□□□ 0.81
GDPD3-201ENST00000360688 ERFEQ4G0M1 354 aa20.08■□□□□ 0.81
GDPD3-201ENST00000360688 STYK1Q6J9G0 422 aa20.08■□□□□ 0.81
GDPD3-201ENST00000360688 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.81
GDPD3-201ENST00000360688 CLEC4GQ6UXB4 293 aa20.08■□□□□ 0.81
GDPD3-201ENST00000360688 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
GDPD3-201ENST00000360688 MASTLQ96GX5 879 aa20.07■□□□□ 0.8
GDPD3-201ENST00000360688 TAOK3Q9H2K8 898 aa20.07■□□□□ 0.8
GDPD3-201ENST00000360688 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
GDPD3-201ENST00000360688 NBPF26B4DH59 902 aa20.05■□□□□ 0.8
GDPD3-201ENST00000360688 HTATSF1O43719 755 aaKnown RBP20.05■□□□□ 0.8
GDPD3-201ENST00000360688 NBPF10Q6P3W6 841 aaKnown RBP20.05■□□□□ 0.8
GDPD3-201ENST00000360688 NBPF5PQ86XG9 351 aaPredicted RBP20.05■□□□□ 0.8
GDPD3-201ENST00000360688 NBPF15Q8N660 670 aa20.05■□□□□ 0.8
GDPD3-201ENST00000360688 ZNF652Q9Y2D9 606 aa20.05■□□□□ 0.8
GDPD3-201ENST00000360688 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
GDPD3-201ENST00000360688 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
GDPD3-201ENST00000360688 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
GDPD3-201ENST00000360688 RGL2O15211 777 aa20.02■□□□□ 0.8
GDPD3-201ENST00000360688 C7orf43Q8WVR3 580 aa20.02■□□□□ 0.8
GDPD3-201ENST00000360688 KLRG2A4D1S0 409 aaPredicted RBP20.02■□□□□ 0.79
GDPD3-201ENST00000360688 NIP7Q9Y221 180 aaKnown RBP eCLIP20.02■□□□□ 0.79
GDPD3-201ENST00000360688 DDNO94850 711 aaPredicted RBP20.01■□□□□ 0.79
GDPD3-201ENST00000360688 NPR1P16066 1061 aa20.01■□□□□ 0.79
GDPD3-201ENST00000360688 TPTE2Q6XPS3 522 aa20.01■□□□□ 0.79
GDPD3-201ENST00000360688 MIS18AQ9NYP9 233 aa20.01■□□□□ 0.79
GDPD3-201ENST00000360688 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
GDPD3-201ENST00000360688 HLFQ16534 295 aa20■□□□□ 0.79
GDPD3-201ENST00000360688 COL13A1Q5TAT6 717 aaPredicted RBP20■□□□□ 0.79
GDPD3-201ENST00000360688 NUP98P52948 1817 aa19.99■□□□□ 0.79
GDPD3-201ENST00000360688 FAM177BA6PVY3 158 aa19.99■□□□□ 0.79
GDPD3-201ENST00000360688 CCDC93Q567U6 631 aa19.99■□□□□ 0.79
GDPD3-201ENST00000360688 SCN4AP35499 1836 aa19.98■□□□□ 0.79
GDPD3-201ENST00000360688 POTEIP0CG38 1075 aa19.98■□□□□ 0.79
GDPD3-201ENST00000360688 POTEJP0CG39 1038 aa19.98■□□□□ 0.79
GDPD3-201ENST00000360688 CHADLQ6NUI6 762 aa19.98■□□□□ 0.79
GDPD3-201ENST00000360688 NEFMP07197 916 aa19.96■□□□□ 0.79
GDPD3-201ENST00000360688 FKBP4Q02790 459 aaKnown RBP eCLIP19.96■□□□□ 0.79
GDPD3-201ENST00000360688 OLFM4Q6UX06 510 aa19.96■□□□□ 0.79
GDPD3-201ENST00000360688 PNISRQ8TF01 805 aaKnown RBP19.95■□□□□ 0.78
GDPD3-201ENST00000360688 L3MBTL3Q96JM7 780 aaPredicted RBP19.95■□□□□ 0.78
GDPD3-201ENST00000360688 PLEKHF1Q96S99 279 aa19.95■□□□□ 0.78
GDPD3-201ENST00000360688 EIF4A1P60842 406 aaKnown RBP19.94■□□□□ 0.78
GDPD3-201ENST00000360688 NGEFQ8N5V2 710 aa19.94■□□□□ 0.78
GDPD3-201ENST00000360688 ZNF277Q9NRM2 450 aaPredicted RBP19.94■□□□□ 0.78
GDPD3-201ENST00000360688 IQCA1LA6NCM1 817 aa19.93■□□□□ 0.78
GDPD3-201ENST00000360688 ERVV-1B6SEH8 477 aa19.93■□□□□ 0.78
GDPD3-201ENST00000360688 HSPA1AP0DMV8 641 aaKnown RBP19.93■□□□□ 0.78
GDPD3-201ENST00000360688 HSPA1BP0DMV9 641 aaKnown RBP19.93■□□□□ 0.78
GDPD3-201ENST00000360688 GTF2E1P29083 439 aaPredicted RBP19.93■□□□□ 0.78
GDPD3-201ENST00000360688 ALDH1B1P30837 517 aa19.93■□□□□ 0.78
GDPD3-201ENST00000360688 RTKN2Q8IZC4 609 aa19.93■□□□□ 0.78
GDPD3-201ENST00000360688 ABCC12Q96J65 1359 aa19.92■□□□□ 0.78
GDPD3-201ENST00000360688 NFE2L2Q16236 605 aa19.92■□□□□ 0.78
GDPD3-201ENST00000360688 THUMPD2Q9BTF0 503 aaKnown RBP19.92■□□□□ 0.78
GDPD3-201ENST00000360688 TAF1DQ9H5J8 278 aaPredicted RBP19.92■□□□□ 0.78
GDPD3-201ENST00000360688 CREBZFQ9NS37 354 aa19.92■□□□□ 0.78
GDPD3-201ENST00000360688 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
GDPD3-201ENST00000360688 MAP3K15Q6ZN16 1313 aa19.92■□□□□ 0.78
GDPD3-201ENST00000360688 ZNF541Q9H0D2 1346 aa19.92■□□□□ 0.78
GDPD3-201ENST00000360688 CRY2Q49AN0 593 aa19.91■□□□□ 0.78
GDPD3-201ENST00000360688 TTLL7Q6ZT98 887 aa19.91■□□□□ 0.78
GDPD3-201ENST00000360688 NUTM1Q86Y26 1132 aa19.91■□□□□ 0.78
GDPD3-201ENST00000360688 NYXQ9GZU5 481 aa19.91■□□□□ 0.78
GDPD3-201ENST00000360688 LDHDQ86WU2 507 aa19.9■□□□□ 0.78
GDPD3-201ENST00000360688 SNED1Q8TER0 1413 aa19.9■□□□□ 0.78
GDPD3-201ENST00000360688 MYL6BP14649 208 aa19.89■□□□□ 0.77
GDPD3-201ENST00000360688 IARSP41252 1262 aaKnown RBP19.89■□□□□ 0.77
GDPD3-201ENST00000360688 SYNE4Q8N205 404 aa19.89■□□□□ 0.77
GDPD3-201ENST00000360688 FZD9O00144 591 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 GPTP24298 496 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 KIF6Q6ZMV9 814 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 TNS4Q8IZW8 715 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 ZBTB3Q9H5J0 574 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 MKRN1Q9UHC7 482 aaKnown RBP19.88■□□□□ 0.77
GDPD3-201ENST00000360688 UBN2Q6ZU65 1347 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 PASKQ96RG2 1323 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 RIC1Q4ADV7 1423 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
GDPD3-201ENST00000360688 IBTKQ9P2D0 1353 aaPredicted RBP19.87■□□□□ 0.77
GDPD3-201ENST00000360688 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
GDPD3-201ENST00000360688 HACL1Q9UJ83 578 aa19.87■□□□□ 0.77
GDPD3-201ENST00000360688 MAPK8IP3Q9UPT6 1336 aa19.86■□□□□ 0.77
GDPD3-201ENST00000360688 PSMD1Q99460 953 aa19.86■□□□□ 0.77
GDPD3-201ENST00000360688 ITGBL1O95965 494 aaPredicted RBP19.85■□□□□ 0.77
GDPD3-201ENST00000360688 HOXA10P31260 410 aaPredicted RBP19.85■□□□□ 0.77
GDPD3-201ENST00000360688 EAPPQ56P03 285 aaPredicted RBP19.85■□□□□ 0.77
GDPD3-201ENST00000360688 SUSD4Q5VX71 490 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms