RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 DDX46Q7L014 1031 aaKnown RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 CWF19L2Q2TBE0 894 aaKnown RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 TTLL5Q6EMB2 1281 aa19.19■□□□□ 0.66
SCAF1-201ENST00000360565 SOS1Q07889 1333 aaPredicted RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 HMGB1P09429 215 aaKnown RBP19.19■□□□□ 0.66
SCAF1-201ENST00000360565 KCNA6P17658 529 aa19.19■□□□□ 0.66
SCAF1-201ENST00000360565 LRP2BPQ9P2M1 347 aa19.19■□□□□ 0.66
SCAF1-201ENST00000360565 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
SCAF1-201ENST00000360565 PIP4K2AP48426 406 aaPredicted RBP19.18■□□□□ 0.66
SCAF1-201ENST00000360565 NEK1Q96PY6 1258 aa19.18■□□□□ 0.66
SCAF1-201ENST00000360565 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
SCAF1-201ENST00000360565 GIMAP6Q6P9H5 292 aa19.18■□□□□ 0.66
SCAF1-201ENST00000360565 C8orf76Q96K31 380 aa19.18■□□□□ 0.66
SCAF1-201ENST00000360565 CNPY2Q9Y2B0 182 aa19.18■□□□□ 0.66
SCAF1-201ENST00000360565 HOXC9P31274 260 aa19.17■□□□□ 0.66
SCAF1-201ENST00000360565 USP48Q86UV5 1035 aa19.17■□□□□ 0.66
SCAF1-201ENST00000360565 LINS1Q8NG48 757 aa19.17■□□□□ 0.66
SCAF1-201ENST00000360565 UBAC1Q9BSL1 405 aa19.17■□□□□ 0.66
SCAF1-201ENST00000360565 RRP9O43818 475 aaKnown RBP19.17■□□□□ 0.66
SCAF1-201ENST00000360565 ADCY5O95622 1261 aa19.17■□□□□ 0.66
SCAF1-201ENST00000360565 UGGT1Q9NYU2 1555 aa19.17■□□□□ 0.66
SCAF1-201ENST00000360565 PDE4CQ08493 712 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 MAP3K5Q99683 1374 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 GPTP24298 496 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 CLCN1P35523 988 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 CCDC70Q6NSX1 233 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 TRIM34Q9BYJ4 488 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 FILIP1LQ4L180 1135 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 BRF1Q92994 677 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 RAI14Q9P0K7 980 aa19.16■□□□□ 0.66
SCAF1-201ENST00000360565 SLC3A2P08195 630 aaKnown RBP19.15■□□□□ 0.66
SCAF1-201ENST00000360565 HAND2P61296 217 aa19.15■□□□□ 0.66
SCAF1-201ENST00000360565 LRRC2Q9BYS8 371 aa19.15■□□□□ 0.66
SCAF1-201ENST00000360565 DDX19AQ9NUU7 478 aaKnown RBP19.15■□□□□ 0.66
SCAF1-201ENST00000360565 KDM5AP29375 1690 aaKnown RBP19.15■□□□□ 0.66
SCAF1-201ENST00000360565 FAM177A1Q8N128 213 aaPredicted RBP19.15■□□□□ 0.66
SCAF1-201ENST00000360565 PLEKHF1Q96S99 279 aa19.15■□□□□ 0.66
SCAF1-201ENST00000360565 CWC25Q9NXE8 425 aaPredicted RBP19.15■□□□□ 0.66
SCAF1-201ENST00000360565 HMG20BQ9P0W2 317 aa19.15■□□□□ 0.66
SCAF1-201ENST00000360565 ZNF213O14771 459 aa19.14■□□□□ 0.65
SCAF1-201ENST00000360565 CCDC82Q8N4S0 544 aa19.14■□□□□ 0.65
SCAF1-201ENST00000360565 MYO5CQ9NQX4 1742 aa19.14■□□□□ 0.65
SCAF1-201ENST00000360565 AK2P54819 239 aa19.14■□□□□ 0.65
SCAF1-201ENST00000360565 TEX35Q5T0J7 233 aa19.14■□□□□ 0.65
SCAF1-201ENST00000360565 LMBR1LQ6UX01 489 aa19.14■□□□□ 0.65
SCAF1-201ENST00000360565 TXLNAP40222 546 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 ANO10Q9NW15 660 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
SCAF1-201ENST00000360565 TBX22Q9Y458 520 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 TTC37Q6PGP7 1564 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 KDM5DQ9BY66 1539 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 GCP02774 474 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 PNMA6EA0A0J9YXQ4 647 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 GOLGA8BA8MQT2 603 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 ZNF165P49910 485 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 LDHAL6AQ6ZMR3 332 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 NAPBQ9H115 298 aa19.13■□□□□ 0.65
SCAF1-201ENST00000360565 IGHMBP2P38935 993 aaKnown RBP19.12■□□□□ 0.65
SCAF1-201ENST00000360565 DNM1Q05193 864 aaKnown RBP19.12■□□□□ 0.65
SCAF1-201ENST00000360565 NUTM2BA6NNL0 878 aaPredicted RBP19.12■□□□□ 0.65
SCAF1-201ENST00000360565 NUTM2EB1AL46 878 aaPredicted RBP19.12■□□□□ 0.65
SCAF1-201ENST00000360565 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
SCAF1-201ENST00000360565 FSIP1Q8NA03 581 aa19.12■□□□□ 0.65
SCAF1-201ENST00000360565 BCORL1Q5H9F3 1711 aa19.12■□□□□ 0.65
SCAF1-201ENST00000360565 NFATC2IPQ8NCF5 419 aa19.12■□□□□ 0.65
SCAF1-201ENST00000360565 CCP110O43303 1012 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 CPA1P15085 419 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 NMIQ13287 307 aaPredicted RBP19.11■□□□□ 0.65
SCAF1-201ENST00000360565 RAB11FIP4Q86YS3 637 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 TTC41PQ6P2S7 1318 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 CFAP100Q494V2 611 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 BICDL1Q6ZP65 573 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 F13A1P00488 732 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 PIBF1Q8WXW3 757 aa19.11■□□□□ 0.65
SCAF1-201ENST00000360565 INTS4Q96HW7 963 aaKnown RBP19.11■□□□□ 0.65
SCAF1-201ENST00000360565 MINDY4BA8MYZ0 360 aa19.1■□□□□ 0.65
SCAF1-201ENST00000360565 IP6K1Q92551 441 aa19.1■□□□□ 0.65
SCAF1-201ENST00000360565 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
SCAF1-201ENST00000360565 ABCC4O15439 1325 aa19.1■□□□□ 0.65
SCAF1-201ENST00000360565 PRDM15P57071 1507 aaPredicted RBP19.1■□□□□ 0.65
SCAF1-201ENST00000360565 CLIP2Q9UDT6 1046 aa19.1■□□□□ 0.65
SCAF1-201ENST00000360565 TRPM2O94759 1503 aa19.1■□□□□ 0.65
SCAF1-201ENST00000360565 SMTNL1A8MU46 457 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 MCM5P33992 734 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 NAP1L1P55209 391 aaKnown RBP19.09■□□□□ 0.65
SCAF1-201ENST00000360565 SAMD1Q6SPF0 538 aaPredicted RBP19.09■□□□□ 0.65
SCAF1-201ENST00000360565 CEP89Q96ST8 783 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 ZNF830Q96NB3 372 aaPredicted RBP19.09■□□□□ 0.65
SCAF1-201ENST00000360565 DACH1Q9UI36 760 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 ORC3Q9UBD5 711 aaPredicted RBP19.09■□□□□ 0.65
SCAF1-201ENST00000360565 KAT6BQ8WYB5 2073 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 SBNO1A3KN83 1393 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 POLR3DP05423 398 aaPredicted RBP19.09■□□□□ 0.65
SCAF1-201ENST00000360565 DHX8Q14562 1220 aaKnown RBP19.09■□□□□ 0.65
SCAF1-201ENST00000360565 UVSSAQ2YD98 709 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 PPFIBP1Q86W92 1011 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 WASF1Q92558 559 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 LGR6Q9HBX8 967 aa19.09■□□□□ 0.65
SCAF1-201ENST00000360565 CBFA2T2O43439 604 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms