RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 NPM2Q86SE8 214 aaKnown RBP27.62■■■□□ 2.01
HOXA4-201ENST00000360046 ARXQ96QS3 562 aa27.62■■■□□ 2.01
HOXA4-201ENST00000360046 LRRC4BQ9NT99 713 aa27.62■■■□□ 2.01
HOXA4-201ENST00000360046 TAF1LQ8IZX4 1826 aa27.62■■■□□ 2.01
HOXA4-201ENST00000360046 ZBTB7BO15156 539 aaPredicted RBP27.61■■■□□ 2.01
HOXA4-201ENST00000360046 IL6STP40189 918 aaPredicted RBP27.61■■■□□ 2.01
HOXA4-201ENST00000360046 PLBD2Q8NHP8 589 aa27.61■■■□□ 2.01
HOXA4-201ENST00000360046 SRCIN1Q9C0H9 1055 aa27.61■■■□□ 2.01
HOXA4-201ENST00000360046 NUP188Q5SRE5 1749 aa27.6■■■□□ 2.01
HOXA4-201ENST00000360046 TNS1Q9HBL0 1735 aaKnown RBP27.6■■■□□ 2.01
HOXA4-201ENST00000360046 ATP10DQ9P241 1426 aa27.6■■■□□ 2.01
HOXA4-201ENST00000360046 BEND3Q5T5X7 828 aa27.59■■■□□ 2.01
HOXA4-201ENST00000360046 KIF6Q6ZMV9 814 aa27.59■■■□□ 2.01
HOXA4-201ENST00000360046 PROM2Q8N271 834 aa27.59■■■□□ 2.01
HOXA4-201ENST00000360046 ZBTB40Q9NUA8 1239 aa27.59■■■□□ 2.01
HOXA4-201ENST00000360046 ZBTB3Q9H5J0 574 aa27.58■■■□□ 2.01
HOXA4-201ENST00000360046 CNTNAP4Q9C0A0 1308 aa27.58■■■□□ 2.01
HOXA4-201ENST00000360046 NEXNQ0ZGT2 675 aa27.58■■■□□ 2.01
HOXA4-201ENST00000360046 EN1Q05925 392 aaPredicted RBP27.56■■■□□ 2
HOXA4-201ENST00000360046 MYD88Q99836 296 aa27.56■■■□□ 2
HOXA4-201ENST00000360046 METTL22Q9BUU2 404 aaPredicted RBP27.56■■■□□ 2
HOXA4-201ENST00000360046 EIF5P55010 431 aaKnown RBP27.55■■■□□ 2
HOXA4-201ENST00000360046 RC3H1Q5TC82 1133 aaKnown RBP27.55■■■□□ 2
HOXA4-201ENST00000360046 MEIS3Q99687 375 aa27.55■■■□□ 2
HOXA4-201ENST00000360046 C4BP0C0L5 1744 aa27.55■■■□□ 2
HOXA4-201ENST00000360046 LINS1Q8NG48 757 aa27.55■■■□□ 2
HOXA4-201ENST00000360046 GNPATO15228 680 aa27.54■■■□□ 2
HOXA4-201ENST00000360046 AK7Q96M32 723 aa27.54■■■□□ 2
HOXA4-201ENST00000360046 AFDNP55196 1824 aaKnown RBP27.54■■■□□ 2
HOXA4-201ENST00000360046 BAG6P46379 1132 aa27.53■■■□□ 2
HOXA4-201ENST00000360046 EZH2Q15910 746 aaKnown RBP27.53■■■□□ 2
HOXA4-201ENST00000360046 CWF19L2Q2TBE0 894 aaKnown RBP27.53■■■□□ 2
HOXA4-201ENST00000360046 DZIP3Q86Y13 1208 aaKnown RBP27.53■■■□□ 2
HOXA4-201ENST00000360046 C1orf115Q9H7X2 142 aa27.53■■■□□ 2
HOXA4-201ENST00000360046 ALDH1L1O75891 902 aa27.53■■■□□ 2
HOXA4-201ENST00000360046 TBC1D2BQ9UPU7 963 aa27.53■■■□□ 2
HOXA4-201ENST00000360046 PCDHB15Q9Y5E8 787 aa27.53■■■□□ 2
HOXA4-201ENST00000360046 MAP3K15Q6ZN16 1313 aa27.52■■■□□ 2
HOXA4-201ENST00000360046 COL15A1P39059 1388 aa27.52■■■□□ 2
HOXA4-201ENST00000360046 HMGB2P26583 209 aaKnown RBP27.52■■■□□ 2
HOXA4-201ENST00000360046 RPS6KA4O75676 772 aa27.51■■□□□ 1.99
HOXA4-201ENST00000360046 IGKV5-2P06315 115 aa27.51■■□□□ 1.99
HOXA4-201ENST00000360046 RTCBQ9Y3I0 505 aaKnown RBP27.51■■□□□ 1.99
HOXA4-201ENST00000360046 GNAI3P08754 354 aa27.5■■□□□ 1.99
HOXA4-201ENST00000360046 SMIM5Q71RC9 77 aa27.5■■□□□ 1.99
HOXA4-201ENST00000360046 DEFB132Q7Z7B7 95 aa27.5■■□□□ 1.99
HOXA4-201ENST00000360046 CAMKK2Q96RR4 588 aa27.5■■□□□ 1.99
HOXA4-201ENST00000360046 NEURL1BA8MQ27 555 aa27.5■■□□□ 1.99
HOXA4-201ENST00000360046 ATP5J2-PTCD1G3V325 749 aa27.5■■□□□ 1.99
HOXA4-201ENST00000360046 USP44Q9H0E7 712 aa27.5■■□□□ 1.99
HOXA4-201ENST00000360046 CCDC125Q86Z20 511 aa27.49■■□□□ 1.99
HOXA4-201ENST00000360046 C9orf78Q9NZ63 289 aaPredicted RBP27.48■■□□□ 1.99
HOXA4-201ENST00000360046 RGPD3A6NKT7 1758 aaPredicted RBP27.48■■□□□ 1.99
HOXA4-201ENST00000360046 RGPD4Q7Z3J3 1758 aa27.48■■□□□ 1.99
HOXA4-201ENST00000360046 A0A087WZG4 1122 aa27.47■■□□□ 1.99
HOXA4-201ENST00000360046 PHF14O94880 888 aa27.47■■□□□ 1.99
HOXA4-201ENST00000360046 UBTFL1P0CB47 393 aaPredicted RBP27.47■■□□□ 1.99
HOXA4-201ENST00000360046 NUP98P52948 1817 aa27.47■■□□□ 1.99
HOXA4-201ENST00000360046 GIGYF2Q6Y7W6 1299 aaKnown RBP27.47■■□□□ 1.99
HOXA4-201ENST00000360046 ERVV-1B6SEH8 477 aa27.46■■□□□ 1.99
HOXA4-201ENST00000360046 HLFQ16534 295 aa27.46■■□□□ 1.99
HOXA4-201ENST00000360046 ANKRD36CQ5JPF3 1778 aa27.45■■□□□ 1.99
HOXA4-201ENST00000360046 GNAI2P04899 355 aa27.45■■□□□ 1.99
HOXA4-201ENST00000360046 GCKRQ14397 625 aa27.45■■□□□ 1.99
HOXA4-201ENST00000360046 NBPF7P0C2Y1 421 aaPredicted RBP27.44■■□□□ 1.98
HOXA4-201ENST00000360046 TCIRG1Q13488 830 aa27.44■■□□□ 1.98
HOXA4-201ENST00000360046 TRAPPC3LQ5T215 181 aa27.44■■□□□ 1.98
HOXA4-201ENST00000360046 BCORQ6W2J9 1755 aa27.44■■□□□ 1.98
HOXA4-201ENST00000360046 GRM8O00222 908 aa27.44■■□□□ 1.98
HOXA4-201ENST00000360046 HSP90AB3PQ58FF7 597 aa27.44■■□□□ 1.98
HOXA4-201ENST00000360046 AMIGO3Q86WK7 504 aa27.43■■□□□ 1.98
HOXA4-201ENST00000360046 UPF1Q92900 1129 aaKnown RBP eCLIP27.43■■□□□ 1.98
HOXA4-201ENST00000360046 IBTKQ9P2D0 1353 aaPredicted RBP27.42■■□□□ 1.98
HOXA4-201ENST00000360046 CAMTA2O94983 1202 aa27.42■■□□□ 1.98
HOXA4-201ENST00000360046 ARHGEF1Q92888 912 aaKnown RBP27.42■■□□□ 1.98
HOXA4-201ENST00000360046 RWDD1Q9H446 243 aaPredicted RBP27.42■■□□□ 1.98
HOXA4-201ENST00000360046 CWC25Q9NXE8 425 aaPredicted RBP27.42■■□□□ 1.98
HOXA4-201ENST00000360046 TFCP2L1Q9NZI6 479 aa27.42■■□□□ 1.98
HOXA4-201ENST00000360046 LRRFIP2Q9Y608 721 aaKnown RBP27.42■■□□□ 1.98
HOXA4-201ENST00000360046 UBR3Q6ZT12 1888 aa27.42■■□□□ 1.98
HOXA4-201ENST00000360046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.41■■□□□ 1.98
HOXA4-201ENST00000360046 IGHDP01880 384 aa27.41■■□□□ 1.98
HOXA4-201ENST00000360046 ZNF827Q17R98 1081 aa27.41■■□□□ 1.98
HOXA4-201ENST00000360046 CCDC191Q8NCU4 936 aa27.41■■□□□ 1.98
HOXA4-201ENST00000360046 ISCA1Q9BUE6 129 aa27.41■■□□□ 1.98
HOXA4-201ENST00000360046 SCN7AQ01118 1682 aa27.41■■□□□ 1.98
HOXA4-201ENST00000360046 GPTP24298 496 aa27.4■■□□□ 1.98
HOXA4-201ENST00000360046 RFC4P35249 363 aa27.4■■□□□ 1.98
HOXA4-201ENST00000360046 AKT1S1Q96B36 256 aa27.4■■□□□ 1.98
HOXA4-201ENST00000360046 ZPR1O75312 459 aa27.39■■□□□ 1.98
HOXA4-201ENST00000360046 C4AP0C0L4 1744 aa27.39■■□□□ 1.98
HOXA4-201ENST00000360046 CENPQQ7L2Z9 268 aaPredicted RBP27.39■■□□□ 1.98
HOXA4-201ENST00000360046 CEP85Q6P2H3 762 aa27.38■■□□□ 1.97
HOXA4-201ENST00000360046 HDAC5Q9UQL6 1122 aa27.38■■□□□ 1.97
HOXA4-201ENST00000360046 ZNF652Q9Y2D9 606 aa27.38■■□□□ 1.97
HOXA4-201ENST00000360046 UTYO14607 1347 aa27.38■■□□□ 1.97
HOXA4-201ENST00000360046 KDM2BQ8NHM5 1336 aa27.38■■□□□ 1.97
HOXA4-201ENST00000360046 SSFA2P28290 1259 aa27.38■■□□□ 1.97
HOXA4-201ENST00000360046 HDAC1Q13547 482 aaPredicted RBP27.38■■□□□ 1.97
HOXA4-201ENST00000360046 SRP68Q9UHB9 627 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms