RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 HSPA2P54652 639 aa13.4□□□□□ -0.26
SSU72-202ENST00000359060 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
SSU72-202ENST00000359060 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
SSU72-202ENST00000359060 ESPNB1AK53 854 aa13.4□□□□□ -0.26
SSU72-202ENST00000359060 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
SSU72-202ENST00000359060 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
SSU72-202ENST00000359060 DDX21Q9NR30 783 aaKnown RBP eCLIP13.4□□□□□ -0.26
SSU72-202ENST00000359060 HOXB7P09629 217 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 SNRPA1P09661 255 aaKnown RBP13.39□□□□□ -0.27
SSU72-202ENST00000359060 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 DRC7Q8IY82 874 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 IBTKQ9P2D0 1353 aaPredicted RBP13.39□□□□□ -0.27
SSU72-202ENST00000359060 ANAPC15P60006 121 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 BEND3Q5T5X7 828 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 EVI5LQ96CN4 794 aa13.39□□□□□ -0.27
SSU72-202ENST00000359060 CCDC173Q0VFZ6 552 aa13.38□□□□□ -0.27
SSU72-202ENST00000359060 LARP1BQ659C4 914 aaKnown RBP13.38□□□□□ -0.27
SSU72-202ENST00000359060 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
SSU72-202ENST00000359060 FAM177BA6PVY3 158 aa13.38□□□□□ -0.27
SSU72-202ENST00000359060 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
SSU72-202ENST00000359060 KIAA2012Q0VF49 1180 aa13.37□□□□□ -0.27
SSU72-202ENST00000359060 SUCLG2Q96I99 432 aa13.37□□□□□ -0.27
SSU72-202ENST00000359060 ZSCAN23Q3MJ62 389 aa13.37□□□□□ -0.27
SSU72-202ENST00000359060 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
SSU72-202ENST00000359060 NECAB1Q8N987 351 aa13.37□□□□□ -0.27
SSU72-202ENST00000359060 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
SSU72-202ENST00000359060 BICD2Q8TD16 824 aa13.36□□□□□ -0.27
SSU72-202ENST00000359060 NPHP3Q7Z494 1330 aa13.36□□□□□ -0.27
SSU72-202ENST00000359060 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSU72-202ENST00000359060 ATP10DQ9P241 1426 aa13.36□□□□□ -0.27
SSU72-202ENST00000359060 SGSM2O43147 1006 aa13.36□□□□□ -0.27
SSU72-202ENST00000359060 AK2P54819 239 aa13.36□□□□□ -0.27
SSU72-202ENST00000359060 KDRP35968 1356 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 APPP05067 770 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 RBM8AQ9Y5S9 174 aaKnown RBP13.35□□□□□ -0.27
SSU72-202ENST00000359060 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
SSU72-202ENST00000359060 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 ANKARQ7Z5J8 1434 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 TTC41PQ6P2S7 1318 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 NPHP1O15259 732 aa13.35□□□□□ -0.27
SSU72-202ENST00000359060 CEBPZQ03701 1054 aaKnown RBP13.35□□□□□ -0.27
SSU72-202ENST00000359060 NMIQ13287 307 aaPredicted RBP13.35□□□□□ -0.27
SSU72-202ENST00000359060 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
SSU72-202ENST00000359060 ZSCAN31Q96LW9 406 aaPredicted RBP13.35□□□□□ -0.27
SSU72-202ENST00000359060 ITSN1Q15811 1721 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 STX6O43752 255 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 GAS2L3Q86XJ1 694 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 GJB2P29033 226 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 DDX11Q96FC9 970 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 SLC52A2Q9HAB3 445 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 CEP126Q9P2H0 1117 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 PDCP20941 246 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 STAP2Q9UGK3 403 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
SSU72-202ENST00000359060 FAM227BQ96M60 508 aa13.33□□□□□ -0.27
SSU72-202ENST00000359060 SNX14Q9Y5W7 946 aa13.33□□□□□ -0.27
SSU72-202ENST00000359060 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
SSU72-202ENST00000359060 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
SSU72-202ENST00000359060 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
SSU72-202ENST00000359060 KIF6Q6ZMV9 814 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 DCAF5Q96JK2 942 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 GOLIM4O00461 696 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 PPFIA3O75145 1194 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 ZCRB1Q8TBF4 217 aaKnown RBP13.32□□□□□ -0.28
SSU72-202ENST00000359060 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
SSU72-202ENST00000359060 ARID3AQ99856 593 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 RRAGDQ9NQL2 400 aaPredicted RBP13.32□□□□□ -0.28
SSU72-202ENST00000359060 LMBRD1Q9NUN5 540 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 LRRFIP1Q32MZ4 808 aaKnown RBP13.32□□□□□ -0.28
SSU72-202ENST00000359060 SNRKQ9NRH2 765 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 CNPY2Q9Y2B0 182 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 RAD50Q92878 1312 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 AOX1Q06278 1338 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 HSPA4P34932 840 aa13.32□□□□□ -0.28
SSU72-202ENST00000359060 KRT85P78386 507 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 TFCP2Q12800 502 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 TTC39AQ5SRH9 613 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 USP48Q86UV5 1035 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
SSU72-202ENST00000359060 KDM4AO75164 1064 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 SH2B1Q9NRF2 756 aaPredicted RBP13.31□□□□□ -0.28
SSU72-202ENST00000359060 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 CPLX1O14810 134 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 GCKRQ14397 625 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 CCDC158Q5M9N0 1113 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 INTS4Q96HW7 963 aaKnown RBP13.31□□□□□ -0.28
SSU72-202ENST00000359060 LRRC2Q9BYS8 371 aa13.31□□□□□ -0.28
SSU72-202ENST00000359060 GPTP24298 496 aa13.3□□□□□ -0.28
SSU72-202ENST00000359060 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms