RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 EPB41L2O43491 1005 aaKnown RBP12.74□□□□□ -0.37
FN1-203ENST00000354785 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 IFNL2Q8IZJ0 200 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 ABCC10Q5T3U5 1492 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 RIMS2Q9UQ26 1411 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 UQCRHLA0A096LP55 91 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 IGHDP01880 384 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 UQCRHP07919 91 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 CATIPQ7Z7H3 387 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 ATP7AQ04656 1500 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
FN1-203ENST00000354785 IQCEQ6IPM2 695 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 MSH6P52701 1360 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 NUCB1Q02818 461 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
FN1-203ENST00000354785 CENPHQ9H3R5 247 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 SAMD9Q5K651 1589 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 TCOF1Q13428 1488 aaKnown RBP12.73□□□□□ -0.37
FN1-203ENST00000354785 TNPO1Q92973 898 aaKnown RBP12.73□□□□□ -0.37
FN1-203ENST00000354785 IFIT3O14879 490 aaKnown RBP12.73□□□□□ -0.37
FN1-203ENST00000354785 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 RNF41Q9H4P4 317 aaPredicted RBP12.73□□□□□ -0.37
FN1-203ENST00000354785 TTC21AQ8NDW8 1320 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 LEKR1Q6ZMV7 388 aa12.73□□□□□ -0.37
FN1-203ENST00000354785 ZNF444Q8N0Y2 327 aaPredicted RBP12.73□□□□□ -0.37
FN1-203ENST00000354785 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
FN1-203ENST00000354785 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
FN1-203ENST00000354785 SSRP1Q08945 709 aaKnown RBP12.72□□□□□ -0.37
FN1-203ENST00000354785 CCDC144CPQ8IYA2 1237 aa12.72□□□□□ -0.37
FN1-203ENST00000354785 SFPQP23246 707 aaKnown RBP eCLIP12.72□□□□□ -0.37
FN1-203ENST00000354785 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
FN1-203ENST00000354785 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
FN1-203ENST00000354785 PPP1R12BO60237 982 aaPredicted RBP12.72□□□□□ -0.37
FN1-203ENST00000354785 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
FN1-203ENST00000354785 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
FN1-203ENST00000354785 BAZ2BQ9UIF8 2168 aaKnown RBP12.72□□□□□ -0.37
FN1-203ENST00000354785 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
FN1-203ENST00000354785 ARHGAP29Q52LW3 1261 aa12.71□□□□□ -0.37
FN1-203ENST00000354785 ANO10Q9NW15 660 aa12.71□□□□□ -0.37
FN1-203ENST00000354785 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
FN1-203ENST00000354785 ANXA1P04083 346 aa12.71□□□□□ -0.37
FN1-203ENST00000354785 CHRNA2Q15822 529 aa12.71□□□□□ -0.37
FN1-203ENST00000354785 PLXNC1O60486 1568 aa12.71□□□□□ -0.37
FN1-203ENST00000354785 STX6O43752 255 aa12.71□□□□□ -0.38
FN1-203ENST00000354785 SLF2Q8IX21 1173 aa12.71□□□□□ -0.38
FN1-203ENST00000354785 TBC1D32Q96NH3 1257 aa12.71□□□□□ -0.38
FN1-203ENST00000354785 SSFA2P28290 1259 aa12.71□□□□□ -0.38
FN1-203ENST00000354785 NEFHP12036 1026 aa12.71□□□□□ -0.38
FN1-203ENST00000354785 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
FN1-203ENST00000354785 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 GJB2P29033 226 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 SEPT7Q16181 437 aaKnown RBP12.7□□□□□ -0.38
FN1-203ENST00000354785 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 MEIS3Q99687 375 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 CTAGE5O15320 804 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 TNIP1Q15025 636 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 GDPD2Q9HCC8 539 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 HAND2P61296 217 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 TMEM67Q5HYA8 995 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 ABCC2Q92887 1545 aa12.7□□□□□ -0.38
FN1-203ENST00000354785 CCDC96Q2M329 555 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
FN1-203ENST00000354785 PHAXQ9H814 394 aaKnown RBP12.69□□□□□ -0.38
FN1-203ENST00000354785 NPATQ14207 1427 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 MFSD6Q6ZSS7 791 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 GRM8O00222 908 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 CNNM3Q8NE01 707 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
FN1-203ENST00000354785 ERLIN1O75477 346 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
FN1-203ENST00000354785 ZSCAN30Q86W11 494 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 SDSP20132 328 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 SLC4A8Q2Y0W8 1093 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 CCDC66A2RUB6 948 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
FN1-203ENST00000354785 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
FN1-203ENST00000354785 ARHGAP45Q92619 1136 aa12.68□□□□□ -0.38
FN1-203ENST00000354785 ZFYVE9O95405 1425 aa12.68□□□□□ -0.38
FN1-203ENST00000354785 KIF5BP33176 963 aa12.68□□□□□ -0.38
FN1-203ENST00000354785 PDE4BQ07343 736 aa12.68□□□□□ -0.38
FN1-203ENST00000354785 DDX46Q7L014 1031 aaKnown RBP12.68□□□□□ -0.38
FN1-203ENST00000354785 C6orf229H3BNL8 230 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 PTPN14Q15678 1187 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 NLRP5P59047 1200 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 FAM193AP78312 1265 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 BAG3O95817 575 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 TMEM266Q2M3C6 531 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 FSIP1Q8NA03 581 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 NEK1Q96PY6 1258 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
FN1-203ENST00000354785 CLIP2Q9UDT6 1046 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 CCDC194A0A1B0GVG4 234 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
FN1-203ENST00000354785 RFC4P35249 363 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms