RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ZNF622Q969S3 477 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDGFA-201ENST00000354513 PLEKHF1Q96S99 279 aa21.16■□□□□ 0.98
PDGFA-201ENST00000354513 SETDB2Q96T68 719 aa21.16■□□□□ 0.98
PDGFA-201ENST00000354513 GLTPD2A6NH11 291 aa21.15■□□□□ 0.98
PDGFA-201ENST00000354513 C21orf2O43822 256 aa21.15■□□□□ 0.98
PDGFA-201ENST00000354513 FSTL1Q12841 308 aa21.15■□□□□ 0.98
PDGFA-201ENST00000354513 PDZRN3Q9UPQ7 1066 aa21.15■□□□□ 0.98
PDGFA-201ENST00000354513 POTECB2RU33 542 aa21.14■□□□□ 0.97
PDGFA-201ENST00000354513 SRGNP10124 158 aa21.14■□□□□ 0.97
PDGFA-201ENST00000354513 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
PDGFA-201ENST00000354513 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.97
PDGFA-201ENST00000354513 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
PDGFA-201ENST00000354513 LTBP3Q9NS15 1303 aa21.13■□□□□ 0.97
PDGFA-201ENST00000354513 ANKRD36CQ5JPF3 1778 aa21.13■□□□□ 0.97
PDGFA-201ENST00000354513 TAF7Q15545 349 aaPredicted RBP21.12■□□□□ 0.97
PDGFA-201ENST00000354513 IFFO2Q5TF58 517 aa21.12■□□□□ 0.97
PDGFA-201ENST00000354513 STYK1Q6J9G0 422 aa21.12■□□□□ 0.97
PDGFA-201ENST00000354513 CLEC4GQ6UXB4 293 aa21.12■□□□□ 0.97
PDGFA-201ENST00000354513 ST5P78524 1137 aa21.11■□□□□ 0.97
PDGFA-201ENST00000354513 PRPF40BQ6NWY9 871 aaKnown RBP21.11■□□□□ 0.97
PDGFA-201ENST00000354513 SCN4AP35499 1836 aa21.1■□□□□ 0.97
PDGFA-201ENST00000354513 LAMB2P55268 1798 aa21.1■□□□□ 0.97
PDGFA-201ENST00000354513 HLFQ16534 295 aa21.1■□□□□ 0.97
PDGFA-201ENST00000354513 THUMPD2Q9BTF0 503 aaKnown RBP21.1■□□□□ 0.97
PDGFA-201ENST00000354513 SNED1Q8TER0 1413 aa21.09■□□□□ 0.97
PDGFA-201ENST00000354513 RGL2O15211 777 aa21.09■□□□□ 0.97
PDGFA-201ENST00000354513 C7orf43Q8WVR3 580 aa21.09■□□□□ 0.97
PDGFA-201ENST00000354513 MASTLQ96GX5 879 aa21.09■□□□□ 0.97
PDGFA-201ENST00000354513 ABCC12Q96J65 1359 aa21.08■□□□□ 0.97
PDGFA-201ENST00000354513 KLRG2A4D1S0 409 aaPredicted RBP21.08■□□□□ 0.97
PDGFA-201ENST00000354513 NFE2L2Q16236 605 aa21.08■□□□□ 0.97
PDGFA-201ENST00000354513 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.97
PDGFA-201ENST00000354513 NBPF5PQ86XG9 351 aaPredicted RBP21.08■□□□□ 0.97
PDGFA-201ENST00000354513 CNKSR1Q969H4 720 aa21.08■□□□□ 0.97
PDGFA-201ENST00000354513 ADAMTSL1Q8N6G6 1762 aa21.07■□□□□ 0.96
PDGFA-201ENST00000354513 VEGFAP15692 232 aaPredicted RBP21.07■□□□□ 0.96
PDGFA-201ENST00000354513 SMC1BQ8NDV3 1235 aa21.07■□□□□ 0.96
PDGFA-201ENST00000354513 NIP7Q9Y221 180 aaKnown RBP eCLIP21.07■□□□□ 0.96
PDGFA-201ENST00000354513 ZNF652Q9Y2D9 606 aa21.07■□□□□ 0.96
PDGFA-201ENST00000354513 EIF4A1P60842 406 aaKnown RBP21.06■□□□□ 0.96
PDGFA-201ENST00000354513 KLRG1Q96E93 195 aa21.06■□□□□ 0.96
PDGFA-201ENST00000354513 TAOK3Q9H2K8 898 aa21.06■□□□□ 0.96
PDGFA-201ENST00000354513 ERFEQ4G0M1 354 aa21.05■□□□□ 0.96
PDGFA-201ENST00000354513 NPHP1O15259 732 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 OLFM4Q6UX06 510 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 JMYQ8N9B5 988 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 COL4A5P29400 1685 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 PCNTO95613 3336 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 FAM177BA6PVY3 158 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 NPR1P16066 1061 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 TTLL7Q6ZT98 887 aa21.04■□□□□ 0.96
PDGFA-201ENST00000354513 RIC1Q4ADV7 1423 aa21.03■□□□□ 0.96
PDGFA-201ENST00000354513 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.96
PDGFA-201ENST00000354513 UBN2Q6ZU65 1347 aa21.02■□□□□ 0.96
PDGFA-201ENST00000354513 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.95
PDGFA-201ENST00000354513 DDNO94850 711 aaPredicted RBP21.01■□□□□ 0.95
PDGFA-201ENST00000354513 POTEIP0CG38 1075 aa21.01■□□□□ 0.95
PDGFA-201ENST00000354513 POTEJP0CG39 1038 aa21.01■□□□□ 0.95
PDGFA-201ENST00000354513 CCDC93Q567U6 631 aa21.01■□□□□ 0.95
PDGFA-201ENST00000354513 SOGA3Q5TF21 947 aa21.01■□□□□ 0.95
PDGFA-201ENST00000354513 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
PDGFA-201ENST00000354513 LRP10Q7Z4F1 713 aa21.01■□□□□ 0.95
PDGFA-201ENST00000354513 NGEFQ8N5V2 710 aa21.01■□□□□ 0.95
PDGFA-201ENST00000354513 IBTKQ9P2D0 1353 aaPredicted RBP21■□□□□ 0.95
PDGFA-201ENST00000354513 LTBP1Q14766 1721 aa21■□□□□ 0.95
PDGFA-201ENST00000354513 ERVV-1B6SEH8 477 aa21■□□□□ 0.95
PDGFA-201ENST00000354513 SLC51AQ86UW1 340 aa21■□□□□ 0.95
PDGFA-201ENST00000354513 CRY2Q49AN0 593 aa20.99■□□□□ 0.95
PDGFA-201ENST00000354513 DPY19L2Q6NUT2 758 aa20.99■□□□□ 0.95
PDGFA-201ENST00000354513 NUTM1Q86Y26 1132 aa20.99■□□□□ 0.95
PDGFA-201ENST00000354513 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
PDGFA-201ENST00000354513 ZNF541Q9H0D2 1346 aa20.98■□□□□ 0.95
PDGFA-201ENST00000354513 MAPK8IP3Q9UPT6 1336 aa20.98■□□□□ 0.95
PDGFA-201ENST00000354513 TAF1P21675 1872 aa20.98■□□□□ 0.95
PDGFA-201ENST00000354513 NEFMP07197 916 aa20.98■□□□□ 0.95
PDGFA-201ENST00000354513 MYL6BP14649 208 aa20.98■□□□□ 0.95
PDGFA-201ENST00000354513 FKBP4Q02790 459 aaKnown RBP eCLIP20.98■□□□□ 0.95
PDGFA-201ENST00000354513 DDX60Q8IY21 1712 aaKnown RBP20.97■□□□□ 0.95
PDGFA-201ENST00000354513 ZBTB3Q9H5J0 574 aa20.97■□□□□ 0.95
PDGFA-201ENST00000354513 ZNF277Q9NRM2 450 aaPredicted RBP20.97■□□□□ 0.95
PDGFA-201ENST00000354513 GPTP24298 496 aa20.96■□□□□ 0.95
PDGFA-201ENST00000354513 PDIA6Q15084 440 aa20.96■□□□□ 0.95
PDGFA-201ENST00000354513 ERBB4Q15303 1308 aa20.95■□□□□ 0.94
PDGFA-201ENST00000354513 NTSR2O95665 410 aa20.95■□□□□ 0.94
PDGFA-201ENST00000354513 SUSD4Q5VX71 490 aa20.95■□□□□ 0.94
PDGFA-201ENST00000354513 ZNF34Q8IZ26 560 aa20.95■□□□□ 0.94
PDGFA-201ENST00000354513 L3MBTL3Q96JM7 780 aaPredicted RBP20.95■□□□□ 0.94
PDGFA-201ENST00000354513 PROSER3Q2NL68 480 aa20.94■□□□□ 0.94
PDGFA-201ENST00000354513 KIF6Q6ZMV9 814 aa20.94■□□□□ 0.94
PDGFA-201ENST00000354513 C3orf67Q6ZVT6 689 aa20.94■□□□□ 0.94
PDGFA-201ENST00000354513 NYXQ9GZU5 481 aa20.94■□□□□ 0.94
PDGFA-201ENST00000354513 TSPYL4Q9UJ04 414 aa20.94■□□□□ 0.94
PDGFA-201ENST00000354513 TMPOP42166 694 aaKnown RBP20.93■□□□□ 0.94
PDGFA-201ENST00000354513 RALBP1Q15311 655 aa20.93■□□□□ 0.94
PDGFA-201ENST00000354513 ANXA1P04083 346 aa20.92■□□□□ 0.94
PDGFA-201ENST00000354513 RIPK4P57078 832 aa20.92■□□□□ 0.94
PDGFA-201ENST00000354513 CHADLQ6NUI6 762 aa20.92■□□□□ 0.94
PDGFA-201ENST00000354513 GIGYF2Q6Y7W6 1299 aaKnown RBP20.92■□□□□ 0.94
PDGFA-201ENST00000354513 PNNQ9H307 717 aaKnown RBP20.92■□□□□ 0.94
PDGFA-201ENST00000354513 LRRC37AA6NMS7 1700 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms