RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 BEND3Q5T5X7 828 aa25.43■■□□□ 1.66
SIGMAR1-202ENST00000353468 ZBTB7BO15156 539 aaPredicted RBP25.42■■□□□ 1.66
SIGMAR1-202ENST00000353468 KIF6Q6ZMV9 814 aa25.42■■□□□ 1.66
SIGMAR1-202ENST00000353468 METTL22Q9BUU2 404 aaPredicted RBP25.42■■□□□ 1.66
SIGMAR1-202ENST00000353468 CHMP4BQ9H444 224 aaKnown RBP25.42■■□□□ 1.66
SIGMAR1-202ENST00000353468 PPP4R2Q9NY27 417 aa25.42■■□□□ 1.66
SIGMAR1-202ENST00000353468 HMGB2P26583 209 aaKnown RBP25.41■■□□□ 1.66
SIGMAR1-202ENST00000353468 AAMPQ13685 434 aa25.41■■□□□ 1.66
SIGMAR1-202ENST00000353468 ARXQ96QS3 562 aa25.41■■□□□ 1.66
SIGMAR1-202ENST00000353468 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
SIGMAR1-202ENST00000353468 ZBTB3Q9H5J0 574 aa25.4■■□□□ 1.66
SIGMAR1-202ENST00000353468 ATP10DQ9P241 1426 aa25.4■■□□□ 1.66
SIGMAR1-202ENST00000353468 RPS6KA4O75676 772 aa25.39■■□□□ 1.66
SIGMAR1-202ENST00000353468 NEXNQ0ZGT2 675 aa25.39■■□□□ 1.66
SIGMAR1-202ENST00000353468 DZIP3Q86Y13 1208 aaKnown RBP25.39■■□□□ 1.66
SIGMAR1-202ENST00000353468 MAP3K15Q6ZN16 1313 aa25.39■■□□□ 1.65
SIGMAR1-202ENST00000353468 MYD88Q99836 296 aa25.39■■□□□ 1.65
SIGMAR1-202ENST00000353468 ZBTB40Q9NUA8 1239 aa25.39■■□□□ 1.65
SIGMAR1-202ENST00000353468 C4BP0C0L5 1744 aa25.38■■□□□ 1.65
SIGMAR1-202ENST00000353468 LINS1Q8NG48 757 aa25.38■■□□□ 1.65
SIGMAR1-202ENST00000353468 TBC1D2BQ9UPU7 963 aa25.38■■□□□ 1.65
SIGMAR1-202ENST00000353468 COL15A1P39059 1388 aa25.37■■□□□ 1.65
SIGMAR1-202ENST00000353468 GNPATO15228 680 aa25.37■■□□□ 1.65
SIGMAR1-202ENST00000353468 ALDH1L1O75891 902 aa25.37■■□□□ 1.65
SIGMAR1-202ENST00000353468 SF3B2Q13435 895 aaKnown RBP25.37■■□□□ 1.65
SIGMAR1-202ENST00000353468 AK7Q96M32 723 aa25.37■■□□□ 1.65
SIGMAR1-202ENST00000353468 N4BP2Q86UW6 1770 aaPredicted RBP25.37■■□□□ 1.65
SIGMAR1-202ENST00000353468 ARFGEF2Q9Y6D5 1785 aa25.37■■□□□ 1.65
SIGMAR1-202ENST00000353468 A0A087WZG4 1122 aa25.36■■□□□ 1.65
SIGMAR1-202ENST00000353468 RTCBQ9Y3I0 505 aaKnown RBP25.36■■□□□ 1.65
SIGMAR1-202ENST00000353468 ERVV-1B6SEH8 477 aa25.35■■□□□ 1.65
SIGMAR1-202ENST00000353468 IGKV5-2P06315 115 aa25.35■■□□□ 1.65
SIGMAR1-202ENST00000353468 CWF19L2Q2TBE0 894 aaKnown RBP25.35■■□□□ 1.65
SIGMAR1-202ENST00000353468 MEIS3Q99687 375 aa25.35■■□□□ 1.65
SIGMAR1-202ENST00000353468 NUP188Q5SRE5 1749 aa25.35■■□□□ 1.65
SIGMAR1-202ENST00000353468 RGPD3A6NKT7 1758 aaPredicted RBP25.34■■□□□ 1.65
SIGMAR1-202ENST00000353468 RGPD4Q7Z3J3 1758 aa25.34■■□□□ 1.65
SIGMAR1-202ENST00000353468 EN1Q05925 392 aaPredicted RBP25.34■■□□□ 1.65
SIGMAR1-202ENST00000353468 GIGYF2Q6Y7W6 1299 aaKnown RBP25.34■■□□□ 1.65
SIGMAR1-202ENST00000353468 NEURL1BA8MQ27 555 aa25.33■■□□□ 1.65
SIGMAR1-202ENST00000353468 TCIRG1Q13488 830 aa25.33■■□□□ 1.65
SIGMAR1-202ENST00000353468 HLFQ16534 295 aa25.33■■□□□ 1.65
SIGMAR1-202ENST00000353468 CAMKK2Q96RR4 588 aa25.33■■□□□ 1.65
SIGMAR1-202ENST00000353468 USP44Q9H0E7 712 aa25.33■■□□□ 1.65
SIGMAR1-202ENST00000353468 ATP5J2-PTCD1G3V325 749 aa25.32■■□□□ 1.64
SIGMAR1-202ENST00000353468 BAG6P46379 1132 aa25.32■■□□□ 1.64
SIGMAR1-202ENST00000353468 CAMTA2O94983 1202 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 EZH2Q15910 746 aaKnown RBP25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 SMIM5Q71RC9 77 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 CCDC136Q96JN2 1154 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 GNAI3P08754 354 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 HSP90AB3PQ58FF7 597 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 B4GALNT3Q6L9W6 998 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 AMIGO3Q86WK7 504 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 CCDC125Q86Z20 511 aa25.31■■□□□ 1.64
SIGMAR1-202ENST00000353468 PCDHB15Q9Y5E8 787 aa25.3■■□□□ 1.64
SIGMAR1-202ENST00000353468 IBTKQ9P2D0 1353 aaPredicted RBP25.3■■□□□ 1.64
SIGMAR1-202ENST00000353468 GCKRQ14397 625 aa25.29■■□□□ 1.64
SIGMAR1-202ENST00000353468 TRAPPC3LQ5T215 181 aa25.29■■□□□ 1.64
SIGMAR1-202ENST00000353468 ARHGEF1Q92888 912 aaKnown RBP25.29■■□□□ 1.64
SIGMAR1-202ENST00000353468 ISCA1Q9BUE6 129 aa25.29■■□□□ 1.64
SIGMAR1-202ENST00000353468 C9orf78Q9NZ63 289 aaPredicted RBP25.29■■□□□ 1.64
SIGMAR1-202ENST00000353468 ADRA2BP18089 450 aa25.28■■□□□ 1.64
SIGMAR1-202ENST00000353468 C1orf115Q9H7X2 142 aa25.28■■□□□ 1.64
SIGMAR1-202ENST00000353468 PHF14O94880 888 aa25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 UBTFL1P0CB47 393 aaPredicted RBP25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 TRIM28Q13263 835 aaKnown RBP25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 DEFB132Q7Z7B7 95 aa25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 CCDC191Q8NCU4 936 aa25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 NARFQ9UHQ1 456 aa25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 NUP98P52948 1817 aa25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 GRM8O00222 908 aa25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 NBPF7P0C2Y1 421 aaPredicted RBP25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 AKT1S1Q96B36 256 aa25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 CWC25Q9NXE8 425 aaPredicted RBP25.27■■□□□ 1.64
SIGMAR1-202ENST00000353468 UBR3Q6ZT12 1888 aa25.26■■□□□ 1.63
SIGMAR1-202ENST00000353468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.26■■□□□ 1.63
SIGMAR1-202ENST00000353468 GNAI2P04899 355 aa25.26■■□□□ 1.63
SIGMAR1-202ENST00000353468 SSFA2P28290 1259 aa25.26■■□□□ 1.63
SIGMAR1-202ENST00000353468 CLEC4GQ6UXB4 293 aa25.26■■□□□ 1.63
SIGMAR1-202ENST00000353468 ZNF652Q9Y2D9 606 aa25.26■■□□□ 1.63
SIGMAR1-202ENST00000353468 AFDNP55196 1824 aaKnown RBP25.25■■□□□ 1.63
SIGMAR1-202ENST00000353468 RGL2O15211 777 aa25.25■■□□□ 1.63
SIGMAR1-202ENST00000353468 ZPR1O75312 459 aa25.25■■□□□ 1.63
SIGMAR1-202ENST00000353468 RFC4P35249 363 aa25.25■■□□□ 1.63
SIGMAR1-202ENST00000353468 ZNF827Q17R98 1081 aa25.25■■□□□ 1.63
SIGMAR1-202ENST00000353468 UTYO14607 1347 aa25.25■■□□□ 1.63
SIGMAR1-202ENST00000353468 ZNF34Q8IZ26 560 aa25.24■■□□□ 1.63
SIGMAR1-202ENST00000353468 GPTP24298 496 aa25.23■■□□□ 1.63
SIGMAR1-202ENST00000353468 USPL1Q5W0Q7 1092 aa25.23■■□□□ 1.63
SIGMAR1-202ENST00000353468 TFCP2L1Q9NZI6 479 aa25.23■■□□□ 1.63
SIGMAR1-202ENST00000353468 SRP68Q9UHB9 627 aaKnown RBP25.23■■□□□ 1.63
SIGMAR1-202ENST00000353468 BCORQ6W2J9 1755 aa25.23■■□□□ 1.63
SIGMAR1-202ENST00000353468 HDAC5Q9UQL6 1122 aa25.22■■□□□ 1.63
SIGMAR1-202ENST00000353468 LRRFIP2Q9Y608 721 aaKnown RBP25.22■■□□□ 1.63
SIGMAR1-202ENST00000353468 ANKRD36CQ5JPF3 1778 aa25.22■■□□□ 1.63
SIGMAR1-202ENST00000353468 NLRP10Q86W26 655 aa25.22■■□□□ 1.63
SIGMAR1-202ENST00000353468 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
SIGMAR1-202ENST00000353468 USP42Q9H9J4 1324 aaKnown RBP25.22■■□□□ 1.63
SIGMAR1-202ENST00000353468 H7C1W4 665 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms