RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 ECHDC1Q9NTX5 307 aa29.17■■■□□ 2.26
PTPA-202ENST00000347048 TPM2P07951 284 aa29.16■■■□□ 2.26
PTPA-202ENST00000347048 MPRIPQ6WCQ1 1025 aa29.16■■■□□ 2.26
PTPA-202ENST00000347048 TSPY26PQ9H489 355 aa29.16■■■□□ 2.26
PTPA-202ENST00000347048 GIGYF1O75420 1035 aaPredicted RBP29.15■■■□□ 2.26
PTPA-202ENST00000347048 MCM5P33992 734 aa29.15■■■□□ 2.26
PTPA-202ENST00000347048 ESCO1Q5FWF5 840 aa29.15■■■□□ 2.26
PTPA-202ENST00000347048 C9orf78Q9NZ63 289 aaPredicted RBP29.15■■■□□ 2.26
PTPA-202ENST00000347048 MAP3K2Q9Y2U5 619 aa29.15■■■□□ 2.26
PTPA-202ENST00000347048 CWC27Q6UX04 472 aaKnown RBP29.15■■■□□ 2.26
PTPA-202ENST00000347048 OFD1O75665 1012 aa29.14■■■□□ 2.26
PTPA-202ENST00000347048 AK2P54819 239 aa29.14■■■□□ 2.26
PTPA-202ENST00000347048 ARHGEF25Q86VW2 580 aa29.14■■■□□ 2.26
PTPA-202ENST00000347048 KLHL34Q8N239 644 aa29.14■■■□□ 2.26
PTPA-202ENST00000347048 LRRC59Q96AG4 307 aaKnown RBP29.14■■■□□ 2.26
PTPA-202ENST00000347048 HYPKQ9NX55 129 aa29.14■■■□□ 2.26
PTPA-202ENST00000347048 PXDNQ92626 1479 aa29.14■■■□□ 2.25
PTPA-202ENST00000347048 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.13■■■□□ 2.25
PTPA-202ENST00000347048 KCNB2Q92953 911 aa29.13■■■□□ 2.25
PTPA-202ENST00000347048 TM6SF1Q9BZW5 370 aa29.13■■■□□ 2.25
PTPA-202ENST00000347048 SIPA1L3O60292 1781 aaPredicted RBP29.13■■■□□ 2.25
PTPA-202ENST00000347048 ANXA1P04083 346 aa29.13■■■□□ 2.25
PTPA-202ENST00000347048 RASEFQ8IZ41 740 aa29.13■■■□□ 2.25
PTPA-202ENST00000347048 ZNF500O60304 480 aaPredicted RBP29.12■■■□□ 2.25
PTPA-202ENST00000347048 ZSCAN22P10073 491 aaPredicted RBP29.12■■■□□ 2.25
PTPA-202ENST00000347048 USP48Q86UV5 1035 aa29.12■■■□□ 2.25
PTPA-202ENST00000347048 EVI5LQ96CN4 794 aa29.12■■■□□ 2.25
PTPA-202ENST00000347048 ATP6V1DQ9Y5K8 247 aa29.12■■■□□ 2.25
PTPA-202ENST00000347048 ADAMTS7Q9UKP4 1686 aa29.12■■■□□ 2.25
PTPA-202ENST00000347048 UTYO14607 1347 aa29.12■■■□□ 2.25
PTPA-202ENST00000347048 IFIT2P09913 472 aaKnown RBP29.12■■■□□ 2.25
PTPA-202ENST00000347048 CCDC39Q9UFE4 941 aa29.12■■■□□ 2.25
PTPA-202ENST00000347048 ZBTB7CA1YPR0 619 aa29.11■■■□□ 2.25
PTPA-202ENST00000347048 RUFY3Q7L099 469 aa29.11■■■□□ 2.25
PTPA-202ENST00000347048 HIP1O00291 1037 aa29.1■■■□□ 2.25
PTPA-202ENST00000347048 DDX58O95786 925 aaKnown RBP29.1■■■□□ 2.25
PTPA-202ENST00000347048 GCP02774 474 aa29.1■■■□□ 2.25
PTPA-202ENST00000347048 VPS53Q5VIR6 699 aa29.1■■■□□ 2.25
PTPA-202ENST00000347048 LINS1Q8NG48 757 aa29.1■■■□□ 2.25
PTPA-202ENST00000347048 ZSCAN31Q96LW9 406 aaPredicted RBP29.1■■■□□ 2.25
PTPA-202ENST00000347048 TERF1P54274 439 aa29.1■■■□□ 2.25
PTPA-202ENST00000347048 SMC3Q9UQE7 1217 aa29.1■■■□□ 2.25
PTPA-202ENST00000347048 STX6O43752 255 aa29.09■■■□□ 2.25
PTPA-202ENST00000347048 FAM184AQ8NB25 1140 aa29.09■■■□□ 2.25
PTPA-202ENST00000347048 SH2B1Q9NRF2 756 aaPredicted RBP29.09■■■□□ 2.25
PTPA-202ENST00000347048 SPG7Q9UQ90 795 aa29.09■■■□□ 2.25
PTPA-202ENST00000347048 LETM1O95202 739 aaPredicted RBP29.08■■■□□ 2.25
PTPA-202ENST00000347048 ANKRD24Q8TF21 1146 aa29.08■■■□□ 2.25
PTPA-202ENST00000347048 ZKSCAN5Q9Y2L8 839 aa29.08■■■□□ 2.25
PTPA-202ENST00000347048 CASTP20810 708 aaKnown RBP29.07■■■□□ 2.24
PTPA-202ENST00000347048 GRM8O00222 908 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 GADD45BO75293 160 aaPredicted RBP29.06■■■□□ 2.24
PTPA-202ENST00000347048 CSPP1Q1MSJ5 1256 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 UVSSAQ2YD98 709 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 ZSWIM6Q9HCJ5 1215 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 SYT1P21579 422 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 PROSER3Q2NL68 480 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 CCDC183Q5T5S1 534 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 DDX21Q9NR30 783 aaKnown RBP eCLIP29.06■■■□□ 2.24
PTPA-202ENST00000347048 CYP46A1Q9Y6A2 500 aa29.06■■■□□ 2.24
PTPA-202ENST00000347048 F13A1P00488 732 aa29.05■■■□□ 2.24
PTPA-202ENST00000347048 PDRG1Q9NUG6 133 aa29.05■■■□□ 2.24
PTPA-202ENST00000347048 PDIA4P13667 645 aaKnown RBP29.04■■■□□ 2.24
PTPA-202ENST00000347048 UBE2HP62256 183 aa29.04■■■□□ 2.24
PTPA-202ENST00000347048 AACSQ86V21 672 aa29.04■■■□□ 2.24
PTPA-202ENST00000347048 GDPD2Q9HCC8 539 aa29.04■■■□□ 2.24
PTPA-202ENST00000347048 SNRKQ9NRH2 765 aa29.04■■■□□ 2.24
PTPA-202ENST00000347048 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.04■■■□□ 2.24
PTPA-202ENST00000347048 CCDC171Q6TFL3 1326 aa29.04■■■□□ 2.24
PTPA-202ENST00000347048 PTH1RQ03431 593 aa29.03■■■□□ 2.24
PTPA-202ENST00000347048 JAKMIP1Q96N16 626 aaKnown RBP29.03■■■□□ 2.24
PTPA-202ENST00000347048 RRP9O43818 475 aaKnown RBP29.02■■■□□ 2.24
PTPA-202ENST00000347048 ZKSCAN1P17029 563 aaPredicted RBP29.02■■■□□ 2.24
PTPA-202ENST00000347048 G3BP1Q13283 466 aaKnown RBP eCLIP29.02■■■□□ 2.242e-6■■■■□ 24.8
PTPA-202ENST00000347048 NECTIN1Q15223 517 aa29.02■■■□□ 2.24
PTPA-202ENST00000347048 CWF19L2Q2TBE0 894 aaKnown RBP29.02■■■□□ 2.24
PTPA-202ENST00000347048 PRPF40BQ6NWY9 871 aaKnown RBP29.02■■■□□ 2.24
PTPA-202ENST00000347048 RBM33Q96EV2 1170 aaKnown RBP29.02■■■□□ 2.24
PTPA-202ENST00000347048 PA2G4Q9UQ80 394 aaKnown RBP29.02■■■□□ 2.24
PTPA-202ENST00000347048 TRPM3Q9HCF6 1732 aaPredicted RBP29.02■■■□□ 2.24
PTPA-202ENST00000347048 RNF214Q8ND24 703 aa29.01■■■□□ 2.23
PTPA-202ENST00000347048 SUCLG2Q96I99 432 aa29.01■■■□□ 2.23
PTPA-202ENST00000347048 CNPY2Q9Y2B0 182 aa29.01■■■□□ 2.23
PTPA-202ENST00000347048 FOXD4L6Q3SYB3 417 aaPredicted RBP29■■■□□ 2.23
PTPA-202ENST00000347048 FOXD4L3Q6VB84 417 aaPredicted RBP29■■■□□ 2.23
PTPA-202ENST00000347048 TCHHQ07283 1943 aa29■■■□□ 2.23
PTPA-202ENST00000347048 MST1RQ04912 1400 aa28.99■■■□□ 2.23
PTPA-202ENST00000347048 SASH1O94885 1247 aa28.99■■■□□ 2.23
PTPA-202ENST00000347048 KAZALD1Q96I82 304 aa28.99■■■□□ 2.23
PTPA-202ENST00000347048 MRC1P22897 1456 aa28.98■■■□□ 2.23
PTPA-202ENST00000347048 PSMA5P28066 241 aa28.98■■■□□ 2.23
PTPA-202ENST00000347048 LARP1Q6PKG0 1096 aaKnown RBP28.98■■■□□ 2.23
PTPA-202ENST00000347048 MAP4K1Q92918 833 aa28.98■■■□□ 2.23
PTPA-202ENST00000347048 BICC1Q9H694 974 aaKnown RBP28.98■■■□□ 2.23
PTPA-202ENST00000347048 KIF1AQ12756 1690 aa28.98■■■□□ 2.23
PTPA-202ENST00000347048 LARGE1O95461 756 aa28.97■■■□□ 2.23
PTPA-202ENST00000347048 GJB2P29033 226 aa28.97■■■□□ 2.23
PTPA-202ENST00000347048 ADCK5Q3MIX3 580 aa28.97■■■□□ 2.23
PTPA-202ENST00000347048 CCDC83Q8IWF9 413 aa28.97■■■□□ 2.23
PTPA-202ENST00000347048 RBM8AQ9Y5S9 174 aaKnown RBP28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms